Salmo trutta (river trout): 115150111
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Entry
115150111 CDS
T08542
Name
(RefSeq) laminin subunit alpha-1-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115150111
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115150111
09142 Cell motility
04820 Cytoskeleton in muscle cells
115150111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_N
Laminin_B
Laminin_II
Laminin_I
Laminin_G_3
ARA70
Motif
Other DBs
NCBI-GeneID:
115150111
NCBI-ProteinID:
XP_029548907
Ensembl:
ENSSTUG00000016493
LinkDB
All DBs
Position
2:complement(9337812..9432709)
Genome browser
AA seq
3087 aa
AA seq
DB search
MRLFCCAIVLLWASSAECQQRGLFPAIFNLASNAEITTNATCGEPEPEMYCKLVEHVPGR
RIRNSQCRTCNAQSQNPKEQHPITNAIDGTNGWWQSPSIKNGRQFHWVTLTLDLHQIFQV
AYVIIKAANSPRPGNWVLERSMDGVDYTPWQYYAISDTECLTRYNITPRLGPPTYKRDDE
VICTSYYSRLVPLEHGEIHTSLINGRPSADQLTPELLDFTSARYIRLRLQRIRTLNADLM
TLSYRDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVAKRLQCVCEHNTCGE
SCNECCPGYHQEPWQPGTLSDGNTCEKCNCHDKANDCYFNQTVANRKMSMNSHGDFHGGG
VCISCTQNTAGVNCETCADGFYRPNKVSPHNENPCVECSCDMKGSLTPACIRDDNHAKPE
NGLNPGQCLCKEGFAGERCDRCAFGYRDFPLCSRCECSLEGSLNIDPCTECICKENVMGA
DCDLCKQGFFNLEGSDPEGCTECFCFGVSDVCESSPWSMSQTVHSNGWLLTTTSKPVYTA
PLTDEDNNLIIPNITMIQLYRFVSTWAAPESLLGKRLTSYGGFLSYSVAYDVSVDNVDKS
LPSQFDLIIEGNGRTLRQMPSRQLLLTPLREQHVSVELLPQNFLDLHTGQRVDRDGLMTA
LADVAGLRIRGHLNASAEGELRLSTVSLDMVDINSTNTVQARDVEQCECPLGYSGTSCES
CSSGFYRVGGILFGGNCLQCECNDHATECDINGVCLDCTHNTTGPHCDQCLHGYYGNPSE
GTPEDCQRCACPLTVATNNFSPTCLLEGPGQVTCDQCQQGYTGTKCERCANGYHGEPMVA
GQECVVCECNGNVDPWEPGHCDTSSGVCLKCHSHTSGDQCERCEDGYYGDAITAKNCQAC
GCHEKGSYSGVCDLLTGQCTCKPNVVGEKCDQCQVGFHGLLNGQGCRECDCIQSGSVSMA
CEEDGQCQCIPGVAGDKCDRCHHSYFNYQGSGCTQCECAHTHGNCNVTTGECICPPHTRG
EKCDLCEEGHWGHDTVTGCKSCNCSETGSSATQCGITNGQCQCRSDFAGQNCDRCAMGYR
GYPECTVCNCNINGTREEFCDEELGVCSCKAPGSCVCKDNVGGGGCDECKKGTLGLSVSN
PAGCSPCFCFGVSSDCEELGGMVRVPITLGSDPELLHVVSQSDLQGSVVGVYYQNPDMLL
DIRDIETPSLAGPYYWRLPKHYQGNKLLSYGGKLSYVVAFYAMDGAGLANYEPQVLMRGG
HLGKQVIYIDMPAPDNGVTTRQDVPLTEHKWKYFNSVSEKAVSHSDFMAVLSHIEYITIK
ASYGTGLQQSRISNITMDTALEAEQGLEDMELASLIETCECPAGYAGLSCQECAPGYYRQ
PVTELNMRGKRPLIQPCVLCRCNNHSQACDLDTGECLGCQHNTAGEHCNVCTSGYYGNVK
GSVRDCSLCACPLKENSFSPTCALEGVVGDFRCNACKPGYEGRYCERCAVGYYGNPSALS
GKCEECRCSTAGSLHPACDSLTGQCECKAGVRGHLCDQCEARHVLDGDQCVLCDDECTRV
LLDDLDAVERSFLSVNLTGVILSPYSTLVNLENDTREVKSLMSSYRSPAFHLTRDEEDMT
NLTQDIDGLLQKAMGVSADGEEMARSTENSVTQGAELLEYINTIQTAIQALAEQAGRLNR
TDNVEMNEAKSRRLMKQVAAMLETIRVVDLAQANARVSTELRAAEALLQRVQEDLQEPQG
VIEFQTLNISSSLTQHQQKLVGAQALLNTARENNNHTHTLLGSINTNLPQYQGLKQNVSR
LNQTAETQLEETQNILADAVILAENMGNITSQLEGAKEQLEQWNPMLRKHVDALVMELRK
QEALELVYKAEDHAQELSKKAQALQSSLAEVMNTTVKATSAAHANSNIRVNIQPAEEMAD
RAILTAAMALNMTVQQEVSLTDLGSEAVQRSAKILAESLALNNSTVGLLANISDVTDRMA
LLINNLHNTSRLIPEPAFLLHSLPNGTSEQVLEAKEQAAMANSSLQRALERLEELRVRLE
ESSKAVAQAKHSVSNTNQLFSDSHATARTAESKLKEAESRTERLYDRLKPLKTLGENLSR
NLSEIREMINQARKQAASIKVSVLADKDCVRAYKPEMSSSNFNTLTMTVKTSEPDNLLFY
LGSSSSVDFMAVEMHHGKVGFLWDVGSGHAKLEYPDIQINNNKWHRINATRFGKHGTLSV
HQLESDPLPAVKTTSPRSATVLDVNKFTLIFVGGLGGQIKKSSAVKMTQFKGCMGEASLN
EKNIGLWNYAEREGQCRGCFMSPQTEETSFHFDGSGYSVVEKPLRSTSTSIVLLFKTLSP
NGLLLYLASNGTRDFLSIELVEGQVRLTFELGSGPLTLSSNKAYNTGSWYKITLQRNKRK
AYISVMAADNSSDKEIIEAQSPGSASDLNRSDLDPIYIGGLPMSRPIRRQVVARSYVGCI
KNMEIARSNFDLLRDSYGVKKGCVLEPIRSVSVLREGYVELPSMSLGSQGELLASFSTRN
HTGIILAGFSKAGIRKRRQARRPFLAVMLVSGHLEVHVNMVEGGSVHKVVVKSRSGSFSD
GQEHSVILQRNRKTMTVLVDEDHQETVRLSSEKASLTLTSLYMGGLPPEEGAGLLRTTSS
FYGCIRNLALDAKLLDLSAAVKYHNVDMDSCLLEERPKRVLLPDDTDLEAEPTLDPARPP
PPPPTQLSALTPGTLTCALMDNSTSLPEAHQFGISRHSHKVLNINPNTVRRSFSLELSVR
TFAQSGLIYYMAHANQMDYTTLQLLGGRLFFTCDKGSGPATASFPVPVNDGQWHTVKTDF
SKKSVVISVDSQASAPVLAKGNTLDVENKLYLGGLPHTYTAKKIGNVTHSLAGCIQKVIL
NSVELDTQSPVSEHSTAHCFTAAQDGTFFNGSGYAALMKEGYKVGSDVTVALEFRSTAPD
GVLLGVSSAKVDAIGLELSSGQAVFHVNNGAGRVSATSRLGRWLCDGRWHTLLAKKTKNA
LSLSVDGVTTLTDNPHPQSTSAETKDPVYVGGFPVGVKQNCLTSRSPFRGCMRNVRLIKG
HVIDFLDFSTAFTLQGVLPHSCPGSAT
NT seq
9264 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcttttgctgtgcaattgtgctgctatgggcatcctccgcggagtgccagcaa
agaggtctcttccccgccatcttcaacctggccagtaatgcagagatcaccaccaacgcc
acctgtggagagcctgagccagagatgtactgtaaactggtggaacacgtaccaggacga
cgcatccgcaactcccagtgtcgaacctgtaatgcccagagtcaaaaccccaaagagcaa
catccaatcaccaacgccattgacggcaccaacgggtggtggcaaagccccagcattaaa
aatggcagacagttccactgggtgaccctcacactagatttacaccagattttccaggtg
gcctacgtcatcatcaaggcagccaactcccctcgtcctggtaactgggtgctggagcgt
tcaatggacggtgtggattatacaccctggcagtattacgccatcagcgacacagaatgt
ctgacccgttacaacatcaccccccgcctcggaccccccacctacaaacgagacgacgag
gtcatctgtacctcttactactcgcggctcgtacccctggagcacggagagatccacacg
tctttgatcaacgggcggcccagtgctgaccaactgaccccagagctgctggacttcacc
tcagcccgctacatccgcctgcgtctgcagagaatccgcacgctcaacgccgacctcatg
accctgagctaccgcgaccccaaggaggtggaccccatcgtcaccagacggtactactat
tcaatcaaggacatttcagtgggtgggatgtgcatctgttacggacacgcccagagctgt
ccttgggaccccgttgccaagaggttgcagtgtgtatgtgagcacaatacctgtggggag
agctgtaatgagtgttgccccggctaccaccaggaaccgtggcaaccgggaaccctctct
gatggcaacacatgcgagaaatgtaactgccacgacaaggccaacgactgctactttaac
cagacggtggccaaccgcaagatgagcatgaactcacatggtgacttccatggcgggggc
gtttgtatcagctgtacccagaacacggccggtgtcaactgtgagacctgcgcagatggc
ttctacagacccaacaaggtgtctccgcacaatgagaacccatgtgtggagtgcagctgt
gacatgaaggggtctttgactcctgcctgtatcagagatgacaaccacgccaagcctgag
aatggtctgaacccaggccagtgtctgtgtaaggagggctttgcgggcgagcgctgtgac
cgctgtgcctttggctacagggacttccccctgtgttcacgctgtgagtgcagtctggag
ggcagcctcaacatcgacccctgcacagagtgcatctgcaaggagaacgtgatgggggct
gactgtgacctgtgtaagcagggtttcttcaacctggagggcagtgacccagagggctgc
actgaatgtttctgcttcggtgtgtctgacgtgtgtgagagctccccctggtctatgtct
cagactgtgcactccaatggatggctccttaccactacaagcaaacctgtctacacggca
cctctcacagatgaagacaacaacctcatcatcccaaacatcaccatgatccaattgtac
cgttttgtttctacatgggccgccccagagtccctcctggggaaaaggctgacatcgtac
ggagggtttttgagctacagcgtggcgtatgatgtttcagtggacaacgtggacaagtct
ctgccgtcacagtttgatttgattatcgaggggaatgggaggaccctgcgtcagatgccc
tccaggcagctcttgctgacgcccctgcgtgagcagcatgtttctgtggagctcttgcca
cagaacttcctagacctgcacacaggtcagagggtggacagggacgggctgatgactgca
ctggccgacgtggccgggctgaggatcagaggtcacctcaatgccagcgccgagggggaa
ctcaggttgagcacggtatctctggatatggtagacatcaattctacaaacacagtccag
gcccgggacgtggagcagtgtgagtgtcccttgggctactctggcacatcctgtgagtcc
tgttcatctgggttctatcgtgtcggggggatcctgttcggaggcaactgtctccagtgt
gagtgtaacgaccacgctacggaatgtgacatcaacggagtgtgtctggactgtactcac
aataccactgggccccactgtgaccaatgcctccacggttactatggcaacccctctgag
ggcaccccggaggactgccagagatgcgcttgcccgctgacagtggcgacgaacaatttc
agccccacctgtctcctagaaggccctgggcaggtgacatgtgaccagtgtcagcagggc
tacactgggactaaatgtgagaggtgtgctaacggttaccatggtgagccgatggtggca
ggccaggagtgcgtggtgtgtgagtgtaacggtaacgtggacccctgggagccgggccac
tgtgacaccagcagcggtgtgtgtctgaagtgtcacagccacaccagcggagaccagtgt
gagaggtgtgaggacggctactacggtgacgccatcaccgccaagaactgccaggcttgt
ggttgccatgaaaaagggtcgtactcgggagtgtgtgacctgctcactggacagtgtacc
tgcaaacccaacgtggtgggagagaagtgtgaccagtgtcaggtgggcttccacggtctt
ctcaacggacaggggtgcagagaatgtgactgtatccagtcaggatctgtgtccatggcc
tgtgaggaagatgggcagtgccaatgcatcccaggggtggcgggggacaagtgtgaccgc
tgtcatcacagttactttaactaccagggcagcggctgtacacagtgtgagtgtgcccac
acccatggcaactgtaacgtgacaacaggcgagtgtatctgtcctccccacaccagagga
gagaagtgtgatctgtgtgaggaaggtcactggggtcacgacactgtgacaggctgtaag
tcatgtaactgcagtgagacgggcagctctgccacccagtgtggcatcaccaacgggcag
tgccagtgccgctctgatttcgctgggcagaactgtgaccgctgcgccatgggctacagg
ggctacccagaatgcacggtgtgcaactgcaacatcaacggcaccagagaggagttctgc
gatgaggaactgggcgtgtgcagctgtaaggccccagggagctgtgtgtgcaaggacaat
gtgggcggaggtggctgtgatgagtgtaagaagggaaccttgggcctatctgtttctaac
ccggccggctgcagcccctgcttctgtttcggggtctcctcagactgtgaggagctgggt
gggatggtccgggtgccgatcacactgggttctgacccagagctgctccatgtggtcagt
cagagtgacctccagggcagtgtagtgggggtctactaccagaacccagacatgctgtta
gacatcagggacatagagacccccagcctggctggaccctactactggaggctgcctaaa
cactaccagggaaacaagttgttgtcgtacggagggaagttatcctacgtggtggcgttc
tatgctatggatggagccggcctggccaactacgagcctcaggtcctgatgagggggggt
catctggggaagcaggtcatctacatagacatgcctgcccctgacaacggggtaacaacc
cgtcaggacgtcccactgaccgagcacaagtggaagtacttcaactctgtgtcagagaaa
gctgtgagtcactctgacttcatggcagtcctgagccacatcgagtacatcaccatcaag
gcctcgtatggtacagggctgcagcagagcagaatatccaatatcactatggatacagcc
ctagaggcggagcaagggttggaggatatggagttggcgagtctgatcgagacctgtgag
tgtccagctggctacgctggactttcctgccaggagtgtgccccgggctactaccggcaa
ccagtgactgagctgaacatgcgggggaagagaccgctgatccagccctgtgtgctctgc
cgttgtaacaaccacagccaggcctgtgacctggacacgggagaatgcctgggctgccaa
cacaacacggcaggggagcactgtaacgtgtgtacctcagggtactatggcaacgtgaaa
ggctccgtcagggactgctcgctgtgtgcctgccccctcaaagagaacagcttcagtcct
acctgtgctctagagggagtggtgggagacttccgctgtaacgcctgcaagcccggctat
gaggggcgctactgtgagaggtgtgcagtgggttactatgggaacccgtcagctttaagt
gggaagtgtgaagagtgtcggtgtagtactgcaggttctctccatccagcgtgtgactct
ctgacgggccagtgtgaatgtaaagccggggtcaggggacacctgtgtgaccagtgcgag
gcgagacacgtcctggacggggaccagtgtgtcttgtgtgatgatgagtgtaccagggtg
ctcctggatgacctggatgcagtagagcgctctttcctgtctgtcaacctgaccggggtc
atcctgtcaccctacagcacactggtcaacttggagaacgacacgcgagaggtcaagagt
ctgatgtcttcgtataggagcccagcctttcacctgaccagggatgaggaggacatgaca
aacctcacccaggacatagacggactgctacagaaggcaatgggtgtgtctgctgatgga
gaggaaatggcccggtccacagagaacagcgttacccagggggccgagcttctggagtac
atcaacaccattcagactgctatacaagccctggcggagcaagctggccgtctaaacagg
acagacaatgtggagatgaacgaggcgaagagcagacggctaatgaagcaggtggcggcc
atgttggaaacaatcagagtggtcgacttagcccaggccaacgccagagtctctacagaa
ctcagggctgccgaggctctcctccagagggtgcaggaggacctccaggagccccaggga
gtgatagagttccagaccctcaacatctccagcagtctgacccaacaccagcagaagcta
gtgggcgcccaggcccttctgaacactgccagggagaacaacaaccacacacacaccctg
ctgggcagcatcaacaccaatctgccacagtaccagggtctgaagcagaatgtgagccgg
ctgaaccagacagcagaaacccagctggaggagactcagaacatcctggctgatgctgtc
attctagcagagaacatgggcaacatcacctctcagctggagggggccaaggaacagctg
gagcagtggaaccccatgttgaggaagcatgtggatgctctggtgatggagctgaggaag
caagaggctctggagctggtctacaaggctgaggaccacgcccaagaacttagcaagaag
gcccaggctctgcagagctctctagcggaggtgatgaataccactgtgaaagccaccagt
gcagcgcatgccaactccaacatcagagttaacatccagcctgcagaggagatggctgac
cgagccatcctgactgctgctatggccctcaacatgacggtccagcaagaggtgtcactt
actgatctgggatctgaggctgtgcagcgtagtgctaagatactggctgagagtctggcc
ctgaacaacagcactgtgggtctcctcgctaacatcagtgatgtgacagacagaatggcc
ttgttaataaacaacctccataacaccagcagactgatcccagagccagccttcctgctc
catagcctgcccaacggcaccagtgagcaggtgctggaggccaaggagcaggctgccatg
gccaactcctccctgcagagggcactggagcgcttggaggagctcagggtcagactggag
gagtccagcaaggcagtggcccaggccaaacacagcgtctccaacaccaaccagctgttc
tctgactcacacgccaccgctaggacagctgagtctaagctgaaggaggcagagagtcgt
accgagaggctgtatgaccgtctcaaacccctgaagaccctgggggagaacctgagcaga
aacctgtctgagatcagagagatgatcaaccaggcccgcaaacaggctgcctcgatcaag
gtgtcagtgctggcagacaaagactgtgtgagggcctacaagcctgagatgtcctccagt
aacttcaacactctaactatgaccgtcaagaccagcgagcctgacaacctgctcttctat
ctgggcagcagctccagcgtggacttcatggcggtggagatgcatcatggcaaggtgggg
ttcttgtgggatgtgggttcaggccacgccaaactggagtaccccgacatccagatcaac
aacaacaagtggcatcgcatcaacgccacgcgctttgggaagcacggcacgctgtcagtc
caccagctggagtcagaccccctgcccgcggtcaagaccacctcaccacgctctgctacg
gtcctggatgtcaacaagtttaccctgatatttgttggcggactgggaggccagatcaag
aagtcctccgcggtgaagatgacccagttcaagggctgtatgggggaggcgtcgctcaac
gagaagaacatcgggctgtggaactacgctgagagggagggccagtgtcgcggctgcttc
atgagtccgcagacggaggagacgtccttccactttgatggcagtggctactcagttgta
gagaaacccctccgctccacctccacctccatcgtactgctgttcaagaccctctccccc
aacggcctgctgctctacctggcctccaacggcacgagggacttcctgtccattgagctg
gtggagggccaagtgcgtctaacctttgaacttggctctggtcctctgaccctctcctcc
aacaaagcctataacactggcagctggtacaagatcaccctgcagaggaacaaacgcaaa
gcttatatatcggtgatggctgcagacaactcatcagacaaagagattatagaggcgcag
tctcctgggtccgcctctgacctcaaccgctctgacctggacccaatctacatcggggga
ctgcccatgtctcgacctatcaggagacaggtagtagcacggtcctatgtgggctgcatc
aaaaacatggagatcgcccgctccaactttgaccttctccgagactcctatggtgtcaag
aaaggctgtgtgttagagccaatccgcagtgtgtctgtactgagagagggctatgtggag
ctgccatcaatgtctcttggctcccagggggagctgctggcctccttctccacccgcaac
cacactggcatcatcctggcaggcttcagcaaggcaggcatccgcaaacgcagacaggca
cgccggcccttcctggcggtcatgctggtgtcggggcacttggaggttcacgtcaacatg
gtggagggcgggagcgtccacaaggttgtggtcaaatcacgctctgggagcttcagtgac
ggacaggagcactctgtcatcctacagaggaacaggaagacgatgacggtactggtggat
gaggaccaccaggagacagtgcgcctgtcctcagagaaagcttctctgaccctcacctct
ctgtacatgggcggcctcccgccagaagagggcgccggactgctacgaaccacttcctcc
ttctacggctgcatcaggaacctggccctggatgccaagttgttggacctgtcagctgca
gtgaagtaccacaacgtggacatggacagctgtctattggaggagaggcctaagagggtc
ctcctacctgatgacactgacctggaggccgagcccaccctggaccctgccagaccccct
ccaccaccccccactcagctcagtgctctcacccccggcacactcacgtgtgcattgatg
gacaacagcacatccctcccagaggcccatcagtttggcatctccaggcacagtcataag
gtcctcaacatcaaccccaacacagtgaggaggagtttctctctggagttgtctgtgcgt
acctttgcccagagtggtttgatctactacatggcccacgccaaccagatggactacacc
actcttcagctgctggggggtcgtctgttcttcacctgtgacaagggcagcggtcccgcc
accgcctccttccctgtgccggtcaacgacggccagtggcacacagtgaagacagacttc
agtaagaagagtgtggtaatcagtgtagacagccaggcgtcagctccagtgctggctaaa
ggcaacaccctggatgtggagaacaagctgtatctgggaggactaccccatacctacacc
gccaagaagataggcaacgtgacccacagcttggctggctgcatccagaaggtgattctg
aacagtgttgaacttgacacccagagtccagtgtctgaacactctactgctcactgtttc
actgcagcccaggacgggaccttcttcaatgggagcggatacgctgctctgatgaaagag
gggtacaaggtgggctcagacgtgacggtggcgctggagttccgcagcacggcgcctgac
ggtgtcctcctaggggtcagcagcgccaaagtggacgccatcggcctggagctgtccagc
ggacaggcggtgttccacgtgaacaacggtgccgggcgggtgtcggccacatcgcggctg
ggccggtggctgtgtgatggccgctggcacaccctgctggccaagaagaccaagaacgct
ctgagtctgagcgtcgacggggtcacgacgctcactgacaatccccacccccagtcaacc
tccgctgagaccaaggacccggtctacgtgggaggcttccctgtcggagtgaaacagaac
tgcctgacttccagatcgccgttccgtggttgtatgcgtaatgtccgtctgatcaagggc
cacgtgatcgactttctggacttcagtaccgcattcaccctccaaggagtgttaccacac
tcctgccccggctctgccacataa
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integrated database retrieval system
