Salmo trutta (river trout): 115150153 Help Entry 115150153         CDS       T08542                                  Name (RefSeq) integrin alpha-5 isoform X1   KO K06484   integrin alpha 5 Organism stru  Salmo trutta (river trout) Pathway stru03266   Virion - Herpesvirus stru04145   Phagocytosis stru04510   Focal adhesion stru04512   ECM-receptor interaction stru04517   IgSF CAM signaling stru04518   Integrin signaling stru04810   Regulation of actin cytoskeleton stru04820   Cytoskeleton in muscle cells stru05100   Bacterial invasion of epithelial cells stru05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:stru00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03266 Virion - Herpesvirus     115150153  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115150153    04517 IgSF CAM signaling     115150153    04518 Integrin signaling     115150153  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     115150153   09144 Cellular community - eukaryotes    04510 Focal adhesion     115150153   09142 Cell motility    04820 Cytoskeleton in muscle cells     115150153    04810 Regulation of actin cytoskeleton     115150153  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     115150153   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     115150153  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:stru04147]     115150153    04515 Cell adhesion molecules [BR:stru04515]     115150153    04090 CD molecules [BR:stru04090]     115150153 Exosome [BR:stru04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    115150153 Cell adhesion molecules [BR:stru04515]  Integrins   Integrin alpha subunits    115150153 CD molecules [BR:stru04090]  Proteins   115150153 SSDB OrthologParalogGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3 CLIPPER Motif Other DBs NCBI-GeneID:  115150153 NCBI-ProteinID:  XP_029548987 LinkDB All DBs Position 16:14906298..14976014 Genome browser AA seq 1069 aa AA seqDB search MGTGRRISAISLNSILRNPVYCARFVVITVVFIQLCATFNLETENRIVYSGPKGSFFGYS VDFFYNNESSFSILIGAPKANTSQTNIIEGGSVYLCPWSQDQSDCSVVIFDNEGDRSFHV NDVDVQVEFKSHQWFGATVRSHGNTVLACAPRYYWRTEHDAPFSDATGTCYLSVDNLKTF VEYAPCRTERHGPAGQGYCQGGFSADFTKDGKVVLGGPGSFYWQGQLVSATTEEIVKAYF PSYFLLSVTGQIQTRQVQGSYDDSYLGYSVAGGEFSGDDIEDFITGVPKGLMLHGLVSLL NGTDLKSMLNLTGEQMGSYFGYAVAATDINNDGLDDLVVGAPMFMQRGSDGLRWEEVGRV YVYLQRRPLLFEPSLPPLGGSQAFGRFGSSLAPLGDLNQDGFNDIAIGCPFGGDDQQGLV LIYNGHASGLKDTPTQALAGQWATGTFPASFGYALRGEKDLDQNGYPDLIVGAFGADKAV LYRARPIVNASASLTVQPTMINSEEKSCMVSNGNETISVSCVNLSFCLSANGKHLPANLV FMVEVQLDPLEQKQRESSVRRTLFLDSQQPSLLETITMANGGPTCLDTRIYLRSEGEFRD KLSPIYITLNFSLDPLAPLDLHGLKPILNYQTTHIIKQKAQIQLDCGEDNICVPDLKLAV YGDRTEVYLGDENSLTLTFNARNEGEGGAYEAELYVVLPAEADYRGIARNNASLTQLTCS YEAENQTRYLVCDLGNPMKSGTSLWAGLRFTVPRLKDTHNTVQFELQIRSKNENKSQTDD ELFHLEVAVVADVILQGVSRPDKLLFPPPNWRMSHSLQEEQDVGPEIQHVYELVNNGPSM ISQSVLELRCPLRSQGHDLLYPLEVITQGPLDCSSNHTLNALKLKLQPPTTEQPPSPLTA SPEHHIQRREVYRDPLDEQGNLSCSTAECWRLRCHVGLLERGSSVILTVRSRIWPETFLE RAYKQYVLECSVEYGVEKMPYSIAPKLKPSGSKKVPMVTTCVAGPDSSDVEQARQPVHGT TVDHHSGHTGWIAAASPGHICTLQVGLLQTIQSLWYSHGESSTQTTGFF NT seq 3210 nt NT seq  +upstreamnt  +downstreamnt atgggcactggacggcgaatttcagcaatttcactcaactcaatcctgcgaaatccagtt tattgcgcccggttcgttgtaattacagttgtttttatccagctgtgcgcaacgtttaac ttagaaacagaaaaccggatcgtctactctggacctaagggatcttttttcggttattcc gtggattttttctacaataatgaatctagtttcagtattctgattggtgctcccaaagct aacaccagccaaacgaacatcatcgaaggtggatctgtgtacttgtgtccctggagccag gaccaatcggattgcagtgttgtcatttttgacaatgaaggggatcgcagtttccacgtc aacgacgtcgacgtccaggtcgagttcaagtcccatcagtggtttggggctacggtgcgt tcccatggcaacactgtcctggcttgtgccccaaggtattactggagaacggaacacgat gcccccttctcggatgccacaggaacctgctacctctccgtggacaacctcaagacattt gtggagtacgccccctgtcgcacagagagacatggtcctgcaggacagggctactgtcag ggtgggttcagtgctgacttcaccaaggatgggaaggttgttctcggaggaccaggaagc ttttactggcaaggtcaactagtctcagccaccacagaggaaatcgtcaaggcctacttc ccatcctacttcctgctctctgttactgggcagatccagactcggcaggtgcaggggagc tatgacgacagctacctcggttactctgttgccggcggggagttcagtggagatgatatt gaagacttcatcaccggagtccccaaaggactcatgctgcatggtttagtgtcattactc aatgggacagacctgaaatccatgctgaacctaactggagaacagatggggtcctatttc ggctacgcagtggcagccaccgacatcaacaacgatggtctggatgacctggtggtgggc gctcccatgttcatgcagagggggtctgacggactgcgttgggaggaggtgggccgtgtc tatgtgtacctacagcggcgtcccttgttgtttgagcccagcctgccccccttggggggt agccaggccttcgggaggttcggcagctccctggccccgctgggagacctcaaccaggac ggcttcaacgatattgcaattggctgtccctttggaggagacgaccaacagggattggtc ctcatctataacgggcatgccagtgggctgaaggacacgcccactcaggctctagctggc caatgggccactggcacctttcctgccagtttcggctatgccctccgcggagagaaagat ctggaccagaatgggtacccagatctcatcgtaggtgcttttggggctgacaaggctgtt ctgtacagggctcggcctattgtcaatgccagtgcttctcttactgtgcaacctaccatg atcaactcagaggagaagagttgtatggtgtccaatgggaacgagactatctctgtgtct tgtgtcaacctcagtttctgcctttcggccaatgggaagcacctccctgctaatctagtt tttatggtggaggtgcagttggaccctctggagcagaaacagagagagtcatcagtgagg agaactctgttcctagatagccaacagcccagcctgctggagaccatcaccatggccaac ggaggaccaacgtgtctcgacacccgcatctacctgcgcagtgaaggggagtttcgggat aaactgtcccccatttacatcaccctcaactttagcctggaccctctcgctccactggac ctccatggcctgaaacccattctaaactaccagacaacacatattataaagcagaaggcc caaattcagctggactgtggggaggacaacatctgtgttcctgacctcaaactggccgtt tatggcgataggacagaggtgtatcttggcgatgagaactccctgaccctgaccttcaat gccaggaacgagggagagggcggggcctacgaggcagagctttacgtggtactgcccgcg gaggctgactacaggggtatagcccgcaacaatgcgagtctgactcagctgacctgtagc tacgaggcagagaatcagacccgctatctggtctgtgacctgggcaaccctatgaagtct ggaacaagtttgtgggcaggcctccgcttcactgtgcctcgactgaaggacactcacaat acagtgcagtttgagctccagatacgcagtaaaaatgagaataaatcccagactgatgat gagctctttcatctggaggtggctgtggttgctgatgttattctacagggcgtttctcgt ccggacaagctcctcttccctcccccgaactggaggatgagccacagcctacaagaggag caggatgttgggcctgagatccagcatgtgtacgagttggtgaacaacgggcccagtatg atcagtcagtcagtgctggagctgcgctgccctctgagatctcagggtcacgaccttttg taccctctggaggtcatcactcagggaccactcgactgcagctccaaccacaccctcaat gcactgaagctcaagctccagcctcctacaacagagcagccaccctcaccactgacggcc agccctgaacaccacatccagaggagagaggtctacagggatcctctggatgaacaaggc aacctgtcgtgttctaccgctgagtgctggaggctgcgctgtcatgtggggttactggag agaggaagcagtgtcattctgaccgtccgctcacgcatctggcctgagaccttccttgag agggcatacaagcagtatgtgctggagtgttctgtggagtacggagtcgaaaagatgccc tattccatcgctcccaaactcaaacccagtggatccaagaaggtccccatggtaacaaca tgtgttgcaggtcctgactccagtgatgtggaacaagccagacaaccagtacatggtacc actgtggatcatcattctggccatactggctggattgctgctgctagccctggtcatata tgtactctacaagttgggcttcttcaaacgatccaatccttatggtacagccatggagaa agctcaactcaaaccacaggcttcttctga

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