KEGG   Salmo trutta (river trout): 115150205
Entry
115150205         CDS       T08542                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
stru  Salmo trutta (river trout)
Pathway
stru03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115150205
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:stru01009]
    115150205
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115150205
Protein phosphatases and associated proteins [BR:stru01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115150205
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     115150205
    Little elongation complex (LEC)
     115150205
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing vATP-synt_E
Other DBs
NCBI-GeneID: 115150205
NCBI-ProteinID: XP_029549117
Ensembl: ENSSTUG00000018493
UniProt: A0A673Z945
LinkDB
Position
16:18187426..18223169
AA seq 678 aa
MAALSVDGRYGLNCGRRNTDQVTVLHVKLTDTAFRALERYQTSKNETSLRPTMQFKGLQG
RIKIPRTDSPDGSQNFDFYLSNVGKDNPQGSFECIQQYMSSSGTPHLVSLGVVQDKVTLC
TTNDSYQVTRERMTLAEEDGTKVLKPGGQFKGKKVQIRKPAPSGSEPVAERKRSTPINPA
KTIRKCLANNPVSQRPYRDRLVHLLALRSYKKLELLARLQRDGVSQKDRSSLGSTLQQVA
NLNPKDNSYTLKDFVYREVQRDWPGYSEDDRVQVNGILARKLGLPTEPLSSSSPPKDGFP
GSPQKCQPELPSHFTDPLMPKKPRISHVTSQGPPAAPTSSSRERRSATKGDNSHHSAAAT
PKRSSLPARPTTAGPPLNHHPPPSQLPVSHRRRLSHHPGLGSNSNSPSTPEGRGTQDLPL
DQSSTCLDPSSSPIATPSPPGRTADRYGSGMPPPASSSHPALTISSSSSSTIIPPPSPSR
SKKSKKHKEKGREKERCREGRSITCDGVSPPEVQVEDGQRPRKRHRSKGEERRRPVIPAK
SPVCSDEDKKRPVHSTDSSPTVMPDYICKYMAVVSMDQRQTYKDNFNAEYEEYRILHARV
EKITRHFTQLDAQCRRLPPGTKEYQEVLEDVVKEYSKVRLHSPNYQVEKQRCEYLHNKLA
HIKRLIADFDQRSSQSWS
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggcgctctccgtggatgggaggtatggactgaattgtggccgacggaatacagac
caagtcaccgtattgcacgtaaaattgacagatacagctttcagagctttagaaaggtac
caaacctctaagaatgaaacgtccttgcggccaacaatgcaattcaagggactccaaggg
cgtattaagatcccaaggactgactctccagatggatctcagaactttgacttctacctg
tccaacgtgggcaaggacaaccctcagggaagctttgagtgcatccaacaatatatgtcc
agttcggggaccccccacctggtgtccttgggggtggttcaagacaaagtcacgttgtgt
accactaacgactcctaccaggtgactcgggagcgcatgacgctggccgaggaggatggg
accaaagtcctcaagcctggaggccagttcaaaggtaagaaagtccagatccgcaagcca
gcgccgtcaggctctgaaccagtcgcggagcgcaaacgctccacccctataaacccagcc
aagaccatccgcaagtgccttgccaacaacccggtttcccagcgcccgtaccgtgaccgc
cttgttcacctgctggcgttgcgctcctacaagaagctggagctactggccaggctgcag
cgggacggggtcagtcagaaggaccgcagctctcttgggagcaccctgcaacaagtggcc
aacctgaaccccaaagataactcgtacactctgaaggactttgtgtaccgtgaggtgcag
agggactggccgggctactctgaggatgaccgcgttcaggtcaatgggattctggcccgg
aaactgggccttcccactgagccgctttcctccagcagtcctcctaaagatggcttccca
ggctccccacagaagtgccagcccgagttaccaagtcacttcactgaccccttgatgccc
aagaagccccgcatttcccatgtcaccagccaagggccacccgccgcccccacctcgtcc
tctagagagcgtcgcagcgccacgaagggggacaacagccaccacagcgccgctgccacc
cccaaacgctcatctctcccagccaggcccaccacggctggcccgcccctcaaccaccac
ccccctccctcccagctgcccgtttctcatcgccgtcgtctgtctcatcaccctggcctg
ggctccaactccaactcgcccagcacgcctgagggccgtggcacccaggacctgcccctt
gaccagagctcaacctgcctggacccctcctcctcaccgatagccacccccagcccccca
ggcaggaccgccgaccgctatggctccggcatgccgccaccagccagctccagccaccca
gccctcaccatctcctcttcatcatcctctaccattatcccccctccctctcccagcaga
agcaagaagtcaaagaagcacaaagagaagggcagagagaaggagcggtgtagggagggg
cgcagcatcacatgcgatggcgtcagccccccagaggtacaggttgaggacggccaaagg
cccaggaagagacaccgctccaagggggaggaaaggcgaaggccagtcatccccgccaaa
agcccagtctgctcggacgaagacaaaaagaggccagtccactccacagactcctccccc
actgtgatgccagattacatatgtaagtacatggcagtggtgtccatggaccagaggcag
acttacaaggacaacttcaacgccgagtatgaggagtaccgtatcctgcatgcccgtgtg
gagaagatcacacgccacttcacccagctagacgctcagtgcaggaggctgccgcctggc
accaaagagtaccaggaggtgcttgaagacgtggtgaaagagtacagcaaagtgagacta
cacagcccaaactaccaggtggagaagcagcgctgcgagtacctgcacaacaagctggcc
cacatcaagcgcctcatcgctgactttgaccagcgcagttcccagtcctggagctag

DBGET integrated database retrieval system