Salmo trutta (river trout): 115150281
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Entry
115150281 CDS
T08542
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
stru04270
Vascular smooth muscle contraction
stru04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115150281
04020 Calcium signaling pathway
115150281
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
115150281
09153 Circulatory system
04260 Cardiac muscle contraction
115150281
04261 Adrenergic signaling in cardiomyocytes
115150281
04270 Vascular smooth muscle contraction
115150281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115150281
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115150281
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
115150281
NCBI-ProteinID:
XP_029549256
Ensembl:
ENSSTUG00000033918
UniProt:
A0A674C4E5
LinkDB
All DBs
Position
16:20444627..20505928
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AA seq
1835 aa
AA seq
DB search
MGDSGGEPNLQSYIMDEETLKRKQKEKLKKLLATGGNPRPARSLFFLTLKNPFRKAAINI
VEWKPFEIIILLTIFANCVALAVFLPMPEEDSNNTNSNLESLEYIFLIVFSIECFLKIVA
YGFLFHENAYLRNCWNILDFVCVSVGLFAVIGDSITYISGVEAQPGEKGGGFDMKALRAF
RVLRPLRLVSGVPSLQVVMNSILKSMLPLFHISLLVFFMVTIYAIVGLELFKCKMHKTCY
YTGTNIIATVENEKPSPCAQAGNGRRCTINGTDCRAGWAGPNNGITHFDNLGFAMLTVYQ
CITTQGWTDVLYWVNDAIGMEWPWMYFLTLILVGSFFVLNLVLGVLSGEFTKEREKGKAR
GEYTEMRETQQLDEDVKGYMEWITQAEVMDADGEGQGLLPLEDGESEAGSLKDMDTMQKI
MYYYKLARKWNIFFRRKCLVYVKSPMFYWWVIFLVFLNTLAIATEHHKQSQQLTEWQDIA
NKVLLSLFAIEMFIKMYALGLQQYFMSLFNRFDCFVVSTGILELILVRMDVMTVMGISVL
RCIRLLRLLKVTKYWTSLSNLVVSLLNSTKSIACLLLLLFLFIVIFSLLGMQVFGGKFNF
PNQPKPRSTFDSFPQALISVFQILTGEDWNAVMYDGIMAHGGPTMPGILVSIYFIILFVC
GNYILLNVFLAIAVDNLAEAESLTMAQKEKSEEKKRKKLLRANMPDKATEEKALLAKKLA
AERAKIEGIPTTAKLKVDEFESNVNEIKDPFPPADFPGDDEEEEPDIPDTPRPRPMADLQ
LKEEVVPIPEASSFYIFSPENKFRKLCHRIINATTFTNTILLFILLSSISLAAEDPIDPM
SFRNQVLASADVVFTSVFTVEVVLKMTVYGAIMHPGSFCRNSFNILDLIVVTVSLLSMLM
ESSAISVVKILRVLRVLRPLRAINRAEGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACI
GVQLFKGQFYSCTDPDKMTEEECRGNYIRYQEGAIHPMTIHKREWINSELNFDNILEGML
ALFTVSTFEGWPKLLYKAIDSNMEDVGPIFNNRVAISIFFIIYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRACVEYALKARPLRCYIPKNQYQYNVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSTHVTDLSDMLNVIFTVLFTVEMVLKLMAYKAKGYFGDPWNVF
DFVIVIGSVVDVILSEVDAALASSGGLYCLHGCAEVNPMQAIAASENARVSITFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSFQALPYVALLILMLFFIYAVVGMQIFGKIALIDGTHI
NRNNNFQTFPHAVLLLFRCATGEAWQEVMLACLYGKRCDPKSDYLPGEEMTCGASFAIIY
FMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHL
DVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPLNSDGTVTFNATLFALVRTALKIKTE
GNFEQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGFRPTKKNASNEIQAGLRSIEEEVAPELQRAISGDLMNEEEMDRAMEDAAEESIFR
RAGGLFGNHVDSFTMEEGTHNPNATQVTSQRPLQMSKSDEGETTSSPAYHANEDFFPTMP
NKTNNNNVNSNARESFPYETDDRVQVYTISTSRSPRDTTDWQLQTVPGPSQDHETPRETP
SPQQAQTQAPDTTFDTLIQEVLINGGLESLARDPRFVSVTKQEMAEALNFDPVDMESSAT
ELMNGRRGRVTTPPIRPPRRSQRKANKLTKPIDLV
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgggggacagtggtggtgaaccgaacctgcagtcctacattatggacgaggaaactctg
aagagaaagcagaaggagaagctaaagaagctccttgccactggaggaaaccctcggccc
gcgcgctccctcttcttcctcacgctgaagaaccctttccgcaaggctgccattaacatc
gtggaatggaaaccgttcgagatcattatcctgctgaccatctttgccaactgtgtggcc
ctggctgtgtttcttcccatgcctgaggaggacagcaacaacaccaacagtaacctggaa
agtctggagtacatcttcctcatcgtcttctccatagagtgctttctaaagatagtagcc
tatggatttctatttcacgagaatgcatatctacggaactgttggaacatactggacttt
gtctgtgtgtctgtggggctgttcgcagtcatcggtgactccatcacctatatcagtggt
gtggaggctcaaccaggggagaagggaggaggcttcgatatgaaggccctcagggcgttc
agggtgctccggcccctcaggctggtctctggagtccccagcctgcaggtggtgatgaat
tccatcctgaagtccatgttacctctgttccacatctccctgctggtattcttcatggtc
actatctatgccatcgtgggactggagctcttcaagtgcaagatgcacaaaacctgctac
tacacaggcacaaatatcatagccacagtggagaatgagaagccatctccttgtgcccaa
gccggtaacggacggcgctgtaccatcaacgggacagactgtagggcaggttgggccgga
cccaacaacggcatcacacactttgacaatctgggcttcgctatgctcactgtctaccag
tgcatcactacccagggctggaccgacgtgctatactgggtgaatgatgctattggtatg
gagtggccatggatgtattttctgactctcatcttggttggctccttctttgtgctcaac
ctggtcctgggcgtgctcagtggtgaattcactaaggagcgagagaagggcaaggcgcgt
ggagagtacacagagatgagggagacccagcagctggatgaggatgtgaagggctacatg
gagtggatcacacaggccgaagtcatggacgccgatggggagggacagggcctgctaccc
ctggaagatggagaatctgaggcagggagtctaaaggacatggacaccatgcaaaaaatt
atgtactactacaagcttgctcgtaaatggaacattttcttccggcgtaagtgtcttgtg
tatgtgaagtcccctatgttctactggtgggtgatctttctggtgtttctgaacacgctg
gccatcgctacagaacaccacaagcagtcccagcaactcactgagtggcaagatattgcc
aacaaggttctgctgtctctgtttgccattgagatgtttataaagatgtacgctctgggc
ctccagcaatacttcatgtctctgttcaaccgcttcgactgcttcgtggtctccaccggg
attctggaactcatcctggtccgcatggacgtcatgaccgtcatgggcatctccgtgctg
cgctgcatacgactgctaaggctgctcaaagtcaccaagtactggacatctctcagtaac
ctggtggtatccctgctaaactccacaaagtccattgcctgcctgctcctcctcctcttc
ctcttcatcgtcatcttctctctgctgggcatgcaggtgtttgggggaaaattcaacttc
cccaatcagcccaaaccccgcagcaccttcgacagcttcccccaggccctcatcagtgtc
ttccagatcctgacgggggaggactggaacgctgtgatgtatgacggcatcatggcgcat
ggcggtcccacaatgcccgggatcctcgtcagcatatacttcatcatcctctttgtctgc
ggaaactacatcctgctgaatgtgttcctggccatcgccgtggacaacctggcagaggcc
gagagtctgaccatggcccagaaggagaagtctgaggagaagaaacgcaagaagctgctc
agggctaacatgcctgacaaggcaacagaggagaaggcactcctggccaagaagttggca
gcagagagggctaaaatagagggcatccctactacagccaagctgaaagtagacgagttt
gagtccaacgtgaatgagatcaaggaccccttcccccctgctgacttccctggcgatgat
gaggaggaagagcctgatatccctgatacccctaggccccgaccaatggcagacctgcag
ctgaaggaggaggtggtaccgattccagaggccagctcattctacatcttcagccctgag
aacaagtttcgtaagctgtgccaccgcatcatcaacgccaccaccttcaccaacaccatc
ctcctcttcatcctcctcagcagcatctccctagccgctgaggaccccatcgaccccatg
tccttcaggaaccaggtgctggcctccgctgacgtcgtcttcacctcagtattcaccgtg
gaagttgtcctcaagatgaccgtatatggagccataatgcaccctggctccttctgccgg
aactcctttaatattctggatctgatagttgtcaccgtatccctcctctccatgctcatg
gagtccagtgctatctctgtggtgaagatcctcagggtgttaagggtgctgaggccccta
agggccatcaacagggctgagggcctcaagcatgtggtccagtgtgtttttgtggccatc
aaaaccattggcaacatcgtgctggtcaccatgctgttagacttcatgttcgcctgcatt
ggagtccagctcttcaagggccaattctactcctgcacagatcctgacaaaatgacagag
gaggagtgtaggggtaactacattaggtaccaggaaggtgccatccatccaatgacgatc
cataagagagagtggatcaactcagagctcaactttgacaacatccttgagggcatgctg
gctctcttcactgtctccacctttgagggctggccaaaactgctgtacaaggccatagac
tctaacatggaggatgttggtcccatcttcaacaaccgagttgccatctccatcttcttc
atcatctacctcatcctcatcgccttcttcatgatgaacatcttcgtcggcttcgtcatc
gttacatttcaggagcaaggagagcaggagtacaagaactgtgagctggacaagaaccag
cgtgcttgtgtcgagtacgccctgaaagcccggccgctgcgctgctacattcctaagaac
cagtatcagtacaacgtgtggtacatcgtcacctcctgctactttgagtacctgatgttc
ctactcatcatgctgaacaccatgtgtctggggatgcagcactgtaaccagtcaacccat
gtgaccgacctgtctgacatgctgaacgtgatcttcactgtgctcttcactgtggagatg
gtcctcaaactcatggcctacaaagctaagggttactttggggacccatggaacgtcttt
gactttgtcatcgtcatcggcagcgttgttgacgtcatcctgagtgaggtcgatgcagcc
ctggcctcctctggaggactgtactgtctccacggctgcgctgaggtgaacccaatgcaa
gccatagcggcgtcggaaaatgcccgtgtgtcaatcaccttcttcagactgttccgtgtg
atgcgtctggttaaactgctgaaccgttctgaggggatccggaatcttctgtggaccttc
atcaagtccttccaggctctgccttatgtcgccctgctcatcctcatgctattcttcatc
tacgctgttgttgggatgcagatatttgggaagatagcgctgatagacgggactcatatc
aacaggaacaacaacttccagacattcccccatgctgtgctgctgctcttcaggtgtgcg
acaggtgaggcatggcaggaagtgatgttggcatgtctgtatgggaagaggtgtgaccct
aagtcagactacctgcctggagaggagatgacctgtggagccagcttcgctatcatctac
ttcatgagcttctacatgctctgtgccttcctgatcatcaacctgtttgtggcggtcatc
atggacaactttgactacctgacccgtgattggtccatcctcggccctcatcacctggac
gagtttaagaagatctgggcagagtacgacccagaggccacggggcgtattaagcacctg
gacgtggtgactctgctgcgtaggatccagcctcctctgggctttggaaagttctgtccc
catagagtggcctgcaagagactggtgtccatgaacatgccactcaacagtgatggaacg
gtcacctttaatgctacgctgttcgcactggtcaggaccgcactgaagattaagactgaa
ggtaactttgagcaggccaatgaggaattgagggccatcatcaagaagatctggaaacgc
accagtatgaagctgctggaccaggtcatcccaccaatcggagatgatgaggtgaccgtg
gggaagttctatgccaccttcctgatccaggactacttcaggaagttgaagaagagacag
gaagagtattatggcttccgccccaccaagaagaacgcctccaacgagatacaggcgggt
ctgaggagcattgaggaggaggtggctccagagttgcagagagccatctcgggagacctg
atgaacgaggaggagatggacagagccatggaggatgcagcggaggaaagcatcttcagg
cgggcgggcggtctgtttgggaaccatgttgattccttcaccatggaggaaggaacccat
aaccctaacgctacacaggtgaccagccagcggccgctgcaaatgagcaagtcagacgag
ggggagacaaccagctcacctgcctaccatgcaaacgaggacttcttccccacaatgcct
aacaaaaccaacaacaacaatgtcaacagcaacgccagggagagttttccctatgagaca
gatgacagggtgcaggtctataccatctcaaccagcagaagtccccgagacaccacagac
tggcagctgcagacagtacctggacccagccaggaccatgagactcccagagagacccct
agcccccagcaggcccagacccaggccccagacaccaccttcgacacactcatacaggag
gtcctgataaatggggggttggagagcttggccagggaccctcgttttgtgtcggtgacg
aaacaggaaatggccgaagctttgaactttgacccggtggacatggagagttccgccact
gagcttatgaatggtcgcagagggagggtcaccacacctccaatcaggccccctcgcaga
tcacagagaaaggccaacaaattaacaaaacccatcgatcttgtttag
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