Salmo trutta (river trout): 115150308
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Entry
115150308 CDS
T08542
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115150308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115150308
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
L1 family
115150308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
Bravo_FIGEY
V-set
C2-set_2
Ig_5
Ig_4
Ig_6
Ig_VEGFR-1-like_5th
C2-set
BiPBP_C
DUF3792
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
115150308
NCBI-ProteinID:
XP_029549317
Ensembl:
ENSSTUG00000016808
LinkDB
All DBs
Position
16:21664377..21835498
Genome browser
AA seq
919 aa
AA seq
DB search
MLVQGGPWVLSVMSLLLLLWQEVSAIEVPLDQKIQQDLKQPPTIMKQSLKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGEYQCF
ASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVAEGSSLVLACNPPPGLPPPHTFWMNSA
MMSITQDRRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPYTLKVQTSRKV
AETPPNFLSPTGTDSSRMMVLRGQKLQLECIAAGVPTPSIKWFKKGGDLNQKVKLDNFNK
TLRIDSVSKEDAGEYMCMANNQIASIRHSIFVQVKAAPYWLDKPFNLVLAPDENSRLVCQ
ANGNPKPLIQWLVNGEPMESDSSLPNPSRSVVGDTIIFHSVQIGSSAVYQCNASNHHGYL
LANAFVSILDMAPRMLGAKNQLIKVIENNRTFLDCPFFGSPLPGLRWFKNGQGSGLDGGQ
YRVYINGSLEIKRARVEDQGTYTCVARNILGKEENQVRLEVKEPTRIVRAPEHQSAIRGT
MARFDCRVKSDLTLPITVTWLKDDKPLSLGWRLKKDEDSLSIPDVHEQDEGTYTCTVKSE
IDQDTASARLTVLVELTDVFVSTTVPPPPPPTTTAATTTISTTTTTTTTTTTTTTTTPPA
TTTTSTTATTPVLVTSTKQADTNVLGMAPGRVIRNLTVKPNSNYANVSWNHNFPAGSSEF
QLEFTLDSNGSVSSVPVNQPPIKLAGLIEGAKYRLRVYSNEYHSISSNVVTFETSAAYIK
DQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPVRDKKDLPLEGVDQKGEDGS
FDYHSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDET
EGNESSEATSPVNAIYSLA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgcagggcgggccttgggtcctgtctgtcatgtctttgctcctgctgctgtgg
caagaagtgtctgctatcgaggttcctcttgatcaaaagatccagcaggacttgaagcag
cctcccaccataatgaaacagtcattgaaggactacattgttgatcccagagacaacatc
atcattgaatgtgaggccaaggggaaccccgtgccaacgttctcatggcgaaggaacggg
aagttcttcaacgtggggaaggatccacgggtgacgatgcggaagcgctcgggaacgctg
gagattagcttccggagcggagggaggccagaggactatgagggggaataccagtgtttc
gcttctaacgactttggaacggcgctgaccaacaagatcctactacgagtgtccaagtcc
cctctgtggcctaaggaggtgttggagccagtggtagtggctgagggttcttccctggtc
ttggcctgtaaccctcctccaggcctgccccctccacacaccttctggatgaacagcgcc
atgatgtctataacccaagataggcgtgtgtccatgggtctgaatggagatctgtatttc
tctaatgttctggctaaagactcccacacagactacagctgcaacgcccggttcctcttc
acacacaccatccagcagaagaacccctacacactcaaagtgcagaccagtcgtaaggta
gcagagaccccccctaacttcctctcccccacggggactgacagctcaaggatgatggtg
ctgagaggacaaaaactacagctggagtgtatcgctgccggagttcccacccccagtata
aagtggtttaagaagggaggagacctgaaccagaaggtgaagctagacaacttcaataag
actctgcgtatcgacagcgtgtcaaaggaggacgcaggggagtacatgtgtatggccaac
aatcagatagcaagcatccgacactccatctttgtccaggttaaagcggctccctattgg
ctggacaagccgttcaacctggtgttagcgccggatgagaacagtcgtctggtgtgtcag
gccaatgggaaccccaaaccactcatccagtggctggtcaacggagagcctatggagagt
gatagctccctgccaaaccccagcagatcggtggtaggtgacaccatcatcttccactct
gttcagatcggcagcagcgctgtgtaccaatgtaacgcctccaatcaccatggttacttg
ctggccaacgctttcgtcagcatactggacatggctcccaggatgcttggtgctaagaac
cagctaataaaggtgatagagaacaacagaaccttcctggactgtcccttctttggctcg
cccctccctgggctacgttggtttaagaatggtcagggcagtggtctggacggtggccaa
taccgagtctacatcaacgggagcctagagatcaagcgtgcgcgggttgaggaccagggg
acatacacctgtgtggccagaaacatcctgggcaaggaggagaaccaggtccgactggag
gtcaaagaaccgacccgtatcgtcagggctccagagcaccagtcagcaattagaggcacc
atggctcgttttgactgccgggtcaaatcagacctcaccctgcccatcactgttacctgg
ctgaaggatgacaagcccctctctctgggatggaggttgaagaaggacgaggattccctg
tccatccctgatgtccacgagcaggatgagggaacatacacttgtactgttaaatcagag
atcgaccaagacactgcctcagcacgccttactgtgttagtcgagcttacagacgtcttc
gtgtctacaactgtccctcctcctcctcctcccactactaccgctgctactacaaccatt
agtactactactactactactactactactactactactactactactactccacctgct
accacaactacttctactactgctaccactcctgtgttggtcaccagcaccaagcaagca
gatacaaatgtgttgggcatggctcctgggagggtgatcaggaacctgacggtgaagcct
aacagtaactacgctaacgtcagctggaaccacaacttcccggccggcagcagcgagttc
cagctagagttcacactggacagcaatggcagtgtgtcaagcgtaccagtgaaccagccg
cccattaagctggcggggctgatcgaaggggccaagtaccgcctgagggtgtactccaac
gaataccacagcatctccagcaatgttgtcacctttgagaccagcgcagcctacattaaa
gaccaggtggacattgctacccagggctggtttatcgggctgatgtgtgccatcgctctc
atcatcctcatcctcctcatcgtctgcttcatcaagaggagtcgcggaggcaaatatcca
gtacgagataaaaaagatctccctctggagggagtggatcagaagggagaggatggatca
tttgactaccacagcgacgaggacaacaagcctctgcagggcagccagaactctctggat
ggcggtgtgaaggaaagtgacgacagcctggtggactacggcgagggaggggatggccag
ttcaatgaggacggctccttcatcggccagtacaccgtcaaaaaggacaaggacgagacg
gaaggcaacgagagttccgaggccacctcacccgtcaacgccatctactcgctggcatag
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