Salmo trutta (river trout): 115150322
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Entry
115150322 CDS
T08542
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115150322
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
Other 90S particles
115150322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
CFAP251_N
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_TEP1_C
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_HPS5
Beta-prop_IFT140_1st
PAC11
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_ACSF4
Beta-prop_WDR19_1st
WDR54
WD40_like
Beta-prop_BBS7
LAIKA
Motif
Other DBs
NCBI-GeneID:
115150322
NCBI-ProteinID:
XP_029549346
LinkDB
All DBs
Position
16:complement(22426547..22431398)
Genome browser
AA seq
482 aa
AA seq
DB search
MSSFFIKKKGPPKVFKKSENSAGSKRKNDGDTGNKLKKKLNSKHNDEISSDSETEGPAVH
RKRRANVEEEFDETPQEKKLRLAKLYLDQLRDEEEKKAEEESFETDLIAGRLQEEVLEQK
GKLQRMVAKDLLPPDASEICLLRGHKLPVTCLVISPDDKHIFSAAKDCSIIKWDVENGKR
LHTIAGGRKGTEDRHVGHTAHVLCISISSDGKYLATGDMNKLIMIWEAATCKHLYKFTGH
RGPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDVITGLDSGSRERCVTA
GGRDRTVRVWKISEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKPLST
VKAAHGRHGDSGLEQPYWVAAVAALQNSDTVASGSHNSKVQLWKCGQGFRHLEPLFSIPV
TGFVNSLKFSSSGKFLVAGVGQEHRLGRWWRLKEAKNGLYIIPLKRQQPEQEEVQNGEEN
GV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttctttataaagaaaaaaggacctccaaaggttttcaaaaagagcgagaat
tcagccggttcaaaacgaaagaatgatggagacacgggaaacaaactcaagaagaagctc
aattcaaagcacaatgatgaaatctccagcgactctgaaacggaaggccccgcagtgcac
agaaaaaggagggccaatgtcgaagaagagtttgatgagactccacaggaaaagaaacta
cgattagccaagctctaccttgaccaattgagggatgaggaagaaaagaaagcagaggaa
gagtcttttgagactgacctgatagctggaagacttcaagaagaagtgcttgaacagaaa
ggaaagcttcaacggatggttgcaaaagatctcctgccaccagacgcgtcagagatttgt
ctgttgagaggccacaagctgccagtcacctgtctggtcatctctcctgatgacaagcac
atcttctctgctgccaaagactgctccatcatcaaatgggatgtagagaatggtaagaga
ctgcacacaatagctggtgggaggaaaggaacagaggatcgccatgttggacatacagcc
catgtcctgtgtatctccatatcgtcggacggcaagtacctggcaacgggagacatgaat
aagttgatcatgatctgggaggcagcaacatgtaaacacctgtacaagttcacaggacat
agaggccctgtgtcgggcctgtctttcaggaggggcacccatgacctgtacagtgcctct
cacgaccgctccatcaaggtgtggaacgtggacgaaaacgcctatgtggaaaccctattt
ggtcaccaggatgtgatcacggggctggacagtgggagtcgggagcgctgtgtgactgca
ggggggagggaccgcactgtgagggtgtggaagatttccgaggagtcccagctagtgttc
catggccatgaaggctccatcgactgtatccagctcattaacgaagaacacatgataaca
ggtgctgatgatggttccgtctccctctggagtgtgaacaagaagaagcccctcagcacg
gtgaaggcagcccacggtcggcatggcgactcggggttggagcagccctactgggtggca
gccgtggcagctctgcagaactctgacaccgtagcctcaggttcacacaactctaaggtg
cagctgtggaagtgtggccaggggttccgtcacctggagcctctcttcagcatccctgtg
actggttttgtcaacagtctgaagttctccagctctgggaagttcctagtggcaggagta
ggacaggagcacaggcttggtcggtggtggagactgaaggaagcaaagaatggactctac
attattcctctgaaaagacaacagccagagcaggaagaggtccagaatggagaagagaat
ggggtttag
DBGET
integrated database retrieval system
