Salmo trutta (river trout): 115150350
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Entry
115150350 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 3-like isoform X1
KO
K12892
serine/arginine-rich splicing factor 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115150350
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115150350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115150350
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115150350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
115150350
NCBI-ProteinID:
XP_029549402
Ensembl:
ENSSTUG00000043493
LinkDB
All DBs
Position
16:24024351..24034263
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AA seq
226 aa
AA seq
DB search
MRPVSNISATSWLPRLLLLLAKILRSCNRRLWPIHNCCIYYFVSPSKETRIRREMGEPAH
LRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDA
VRELDGRTLCGCRVRVELSNGEKRSRSRGPPPSWSRRPGREDYSSRRRGSPPVRRRSPRR
RSFSRSRSRSLSRDRRRERSISRDRNHKPSRSFSRSRSRSRTAERK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctgtctctaatatttctgccacaagctggctaccaagacttcttctgctgcta
gcaaagattcttcggagctgtaatcggagactttggccaatacataactgttgtatttat
tatttcgtcagcccttcaaaggaaaccaggatccgtcgagagatgggagaacctgctcat
ctcagagattgtcctctggattgcaaggtgtatgtagggaacttgggcaacagtggaaac
aagactgagttggagagggcgtttgggtactatggccctctgcggagtgtgtgggtggcc
aggaaccccccaggttttgcctttgtcgagtttgaggatcccagagatgcaaccgatgct
gtgagagaactggatggacggacgctgtgtggctgcagagtgagagttgaattgtccaat
ggggagaaacgctcgaggagccgtggccctcctccctcctggagccgtcgccctggacgt
gaagactacagcagcaggcgccgtgggagcccgcctgtcagacgccgctctcctaggagg
aggagcttcagccgcagtcgcagcaggtctctgtcaagagatcgaagaagagagaggtct
atctccagagacaggaaccataaaccttcaagatccttctcaaggtctcggagccgctcc
aggaccgctgagagaaagtga
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