Salmo trutta (river trout): 115150425
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Entry
115150425 CDS
T08542
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115150425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115150425
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115150425
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
115150425
Nuclear receptors [BR:
stru03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
115150425
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
115150425
NCBI-ProteinID:
XP_029549564
Ensembl:
ENSSTUG00000013468
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Position
16:complement(26726240..26745372)
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AA seq
589 aa
AA seq
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MPCVQTQYGTVPYDNNYFISEFLNPDLSAKPAMDVGAQRDQLTASSLPSINTLVGSGYVG
EFDAYSCQITTSASNAPSGPAAGGSSSPQAQHSAFKLDDLQVYGCYPGSFALSYLDETLS
SCGSDYYGSPASATASPPTPGFQSQPGSAWDSPFSPYSPGPGFWVADKSGLAQQPSFFTF
TPPVEQHSPLGQHQGPQQGEEDPFFQPSQQHASPLHYTPLSLDQVSLDSPGLTEGPMLSP
KIGSPGANEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRR
RNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKTVPESASTTPPINIITSLVRA
HIDSNPAIGKLDYSKYHETVASLSEKEDANDIQQFYDLLTGTMDVLRKWAETIPGFTAFC
PEDQELLLESAFVELFILRLAYRSSPEKNKLIFCNGVVLHRMQCVRGFGDWIDSIMDFSQ
SLHRMNLDVSSFACLAALVIITDRHGLKEPKRVEEFQNRLITCLRDHVTGSGSDAGRPQP
NFLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVDKIFMDTLPF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgttcaaactcagtatggaactgtgccctacgacaacaactactttatctct
gagttcctgaaccctgacctcagtgctaagccagccatggacgtcggtgcccagcgggac
cagctcaccgcctcctccctccccagcatcaacaccctggtgggcagcggctacgtgggc
gagtttgatgcctactcctgccagatcactacctctgcctccaatgccccctccggcccc
gcggccggcggcagctccagccctcaggctcagcactcagccttcaaactggacgacctc
caggtgtacggctgctacccgggctcctttgccctcagctacctcgacgagacgctgtcc
tcctgtggctccgattactatggcagccctgcatcggccaccgcctccccacccaccccg
ggcttccagagccagcctggctcggcctgggactcccccttcagcccctactccccaggc
cctgggttctgggtggctgataagtcaggcctagctcagcagccctccttcttcaccttc
acccccccggtggagcagcactcccccctggggcagcatcagggcccccagcaaggtgag
gaggaccctttcttccagccctcacagcagcacgcctcccctctccattacaccccctta
tccctggaccaggtgtccctggacagccccgggctcacggaggggcctatgttgtcccct
aagatcggcagccccggggccaacgagggtcgctgtgcggtgtgtggggacaacgcctcc
tgtcagcactatggcgtccgcacctgtgagggctgcaagggcttctttaagcgaactgta
cagaagaatgctaaatacgtgtgcctagccaacaaagactgtccagtagacaagcggcgg
aggaaccgctgccaattctgccgtttccagaagtgccttgtggtgggaatggtgaaagaa
gtcgtccgcacagacagcctgaaaggtcgcaggggtcgtctgccctctaaacccaagact
gtaccagagtcagcgtccaccaccccacccatcaacatcatcacctctcttgtcagggct
cacatagactccaaccccgccatcggaaaactggactactccaagtaccatgagacagtg
gccagcctatcagagaaagaggatgccaacgacatccagcagttctacgacctgctgact
ggcaccatggatgtgctgcggaaatgggccgagaccatcccaggattcaccgccttctgc
ccagaagaccaggagctgctcctggaatctgctttcgtggaactcttcatcctccggcta
gcatacaggtcgagtcctgagaagaacaagctgatcttctgcaatggtgtggtacttcac
cgtatgcagtgtgtgaggggctttggcgactggatcgactccatcatggacttctcccag
agcctccaccgcatgaacctggacgtgtcctcattcgcctgcctcgcagcactcgtcatc
atcacagatcgccatggccttaaagagcccaaacgggtggaggagttccagaaccgcctc
ataacctgtctgagggaccacgtgactggcagtggctccgacgcggggcggccccagccc
aacttcctgtcccgtctgctagggaagctccccgaactgcgcaccctctgcacccagggc
ctgcagcgcatcttctacctgaagctggaggacctggtccccccaccacccatcgtagac
aaaatcttcatggataccttacctttctga
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