KEGG   Salmo trutta (river trout): 115150441
Entry
115150441         CDS       T08542                                 
Name
(RefSeq) negative elongation factor C/D-like isoform X1
  KO
K15181  negative elongation factor C/D
Organism
stru  Salmo trutta (river trout)
Pathway
stru03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115150441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115150441
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     115150441
SSDB
Motif
Pfam: TH1 DUF4817
Other DBs
NCBI-GeneID: 115150441
NCBI-ProteinID: XP_029549587
Ensembl: ENSSTUG00000014976
LinkDB
Position
16:27143905..27151563
AA seq 579 aa
MDEEYYERNIGDWDGPDGNQDDYVEGENDGKVQEDCLQKFSSRDYIMEPAVFNTLKTYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEDNLEKNLPEFAKMVCHGEHTYLFAQAMMSIMSQE
EQGGSAMRRIGQEVQKSAHQRGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVSELSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQME
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMMN
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggacgaggaatattacgagaggaatattggagactgggatggtccggatggcaatcag
gacgactatgttgaaggggagaatgatgggaaagttcaggaggactgcctacagaagttc
tccagcagagattacatcatggagcctgctgtattcaacacccttaaaacatattttcag
gctggtggctcccctgaacacgtcatccagctcctgtctgagaactactctgctgtggcc
cagactgtgaacctgctggcagagtggctcatccagatgggtgtagagccagctcaggtg
caggaacgggtagagaatcacttgaagagtctgctgatcaagcactttgacccacagaag
gctgactccatctttaccgtggagggagagactcctgcctggctggaacagatgatcgcc
cacaccacctggagagaccttttctacaagctggccgaggcccaccctgactgtctgatg
ctcaacttcactgtcaagctcatctcagacgcgggctaccagggggagatcaccagtgtg
tccacagcgtgccagcagctggaggtgttctccagggtcctgagaacctctctggccaca
ctgctggatggaggagaggacaacctggagaagaacctgccagaattcgctaagatggtg
tgtcacggggagcacacttacctgtttgcccaggccatgatgtccatcatgtctcaggag
gagcagggagggtcggccatgcgaaggatcggccaggaagtacagaagtctgcacatcag
agggggcatgatgccagtcagatcaccctggcattgggcacagcagcagcctaccctcga
gcttgccaggccctgggcgcaatgctgtccaaaggggcactcaaccctgccgacatcact
gtgctcttcaaaatgttcagcagcatggacccgcctcccgtagagctgattcgagtgcct
gccttcctggacctgttcatgcagtcgctgttcaagccaggctccaagatcaaccaggac
cataaacacaaatacattcacatcctggcctacgctgccagtgtggtcgagacatggaaa
aagaacaaacgagtgaacatcaacaaggatgagctcaagtccacctccaaggccattgag
acggtccataacctgtgttgcaatgagaataaaggagccacagaactggtgtctgagctc
agcactctgtaccagtgcatccggttcccggttgttgccatgggggtgctgaaatgggtt
gattggacggtctctgagccccgctacttccagctccagacagaccacacccctgtccat
ctagcacttctggatgagatcagcacctgtcaccagcttctgcacccacaggtcctccag
ctgctgatcaagctatttgagacagaacactcccagcttgacgtcatggagcagatggag
ctgaagaagacactgttggatcgtatggtccacctgctgagtcggggctacgtgttgcct
gtggtcggatacatccgcaagtgcctggagaagctcaacacggacatctctctcattcgc
tacttcgtaacagaagtgttggatgtgattgccccgccgtacacttcagactttgtccag
ctgttcctgcccatcctggagaacgacagcatcgctggaaccattcggacagagggagaa
catgaccctgttgcggagttcatagctcactgcaaatccaacttcatcatgatgaattga

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