Salmo trutta (river trout): 115150585
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Entry
115150585 CDS
T08542
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115150585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115150585
03036 Chromosome and associated proteins [BR:
stru03036
]
115150585
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115150585
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115150585
PBAF complex
115150585
GBAF(ncBAF) complex
115150585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
115150585
NCBI-ProteinID:
XP_029549893
Ensembl:
ENSSTUG00000007537
LinkDB
All DBs
Position
16:complement(33110915..33131712)
Genome browser
AA seq
1058 aa
AA seq
DB search
MAVRKKDGGPNVKYFETSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPMKSFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEAKLLGKLKDIIKRHQGSVTEDKTCSSHVVVP
IPASLEEEEWVRPVMKRDKQVLLHWGYSPDSYDTWISASEVEAAVEDPPSPEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPKRKRISAKTLTDEVTTPGDERRDKKPGSAKKRKRSP
SPSPTPPPQESKKKNTKKGPTTPNTKSKRGQREEEPEDLTKDLDEPSPVPAVEEVTLPKT
ANTKKDSELTPVKGGTMTDLDEQEDESMETAEKEEEEGSPSVKGEPVKGSDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSS
LVPLQPKASQTPAAQQILSFPDKVKEKQPADLQNFGLRTDMYSKKTGPPKSKTAASAMRD
WTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDTSSSLGPLA
YQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVE
EAARASGRQDPLYGLEGSGIAGTSLEEGDKPEESSEESKSDSQSSEEKRETKENKDRAME
EDEKQGENGKKEEERGREGEGERDREAEKTETEMGEREKEKEGKEALEEGQREGESEGER
KAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRH
FEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQTGGP
HPTGPPPQGPSAIQSQPAPSIPAPQPAPSPAPSASSVPMTGPSSAQAQPTEPQPPPSGPH
TSPPRPPCLSSTNTTPTLHESSAPGDTLHSSTPAPTPQ
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaacgtaaaatatttcgaaacgtctgatacc
gtctcgcaattcgacaatgtccgcgtttggttgggcaagaattataaaaagtacatccag
gcggagccccccaccaacaagtctctgtccagcctggtggtccagctactgcagtttcag
gaggaggtgttcggacgacatgtcagcaacccacctctcaccaggctgccgatgaagagt
ttcctggactttaagtctggtggggctctctgtcacattctggcagcagcctacaagttc
aagagtgatcagggctggcgcaggtttgactttcagaatccttctcggatggaccgcaat
gtggagatgttcatgactattgagaaatccctagtacagaacaactgtctgagtcgacca
gtgatctacctgagctctgacattgaggccaagctgctggggaaactgaaggacataatc
aagaggcaccagggctcagtgactgaagacaagacatgcagctcccatgtggtggtcccc
atccctgccagtctggaggaggaggagtgggtgcgtccggtgatgaagagagacaagcag
gtgctgctccactggggatactctcctgacagctatgacacctggatctcagccagtgag
gtggaggcagctgtggaagatccgcccagcccagagaaacccaggaaggtccatgccaag
tggatcctggacctggaccagtttaatgagtggatgaatgaggaggactatgaggtggga
gaggggggccccaagaggaagaggatctcagccaagaccctgacggacgaggtgaccacc
ccgggggacgagcgccgggacaagaagcccggcagcgccaagaagaggaagcgctccccc
tccccttcgcccactccaccaccccaggagagcaagaagaagaacaccaagaaagggccc
accaccccgaacactaagtctaagcgaggccagagagaggaggagccggaggatctgact
aaagatctggatgaaccatcacctgtacctgcagtggaggaggtcaccctacctaagaca
gccaacactaagaaagactctgagttgacaccagtgaaaggaggtaccatgacagacctg
gatgagcaagaggatgaatccatggaaactgcagaaaaggaggaggaggagggctctccg
agtgtgaaaggagagccggtgaaagggtcggacctccatgaggacaacgtgactgagcag
acccaccacatcattattcccagctacgctgcatggtttgactacaacagtgtccatgct
attgagcgcagagccctcccagagtttttcaatggcaagaacaaatccaaaacccctgag
atttacctagcctacaggaacttcatgattgacacttacaggctgaacccgcaggagtac
ctcacctccaccgcctgtcgtaggaacctggctggagacgtgtgcgccatcatgagggtg
catgcattcctggagcagtggggtctgatcaactaccaggtggactcagagagccggccc
acccccatgggccccccgcccacctcccacttccacgtcctggctgacaccccttccagc
ctggtgcccctgcagcccaaggcatcccagactccggcagcccagcagattctgtcattc
ccagacaaggtgaaggagaagcagccagccgacctgcagaactttggcctgaggacagac
atgtacagcaagaagactgggcctcctaagagtaagactgctgccagcgccatgcgagac
tggaccgaacaggagacactactgctgctagagggtctggagatgtacaaggatgactgg
aacaaggtgtcagagcacgtgggctcacgtacccaggacgagtgtatcctgcacttcctg
cgtctgcccattgaggacccatacctggaggacacgtcctcgtccctgggccccctggcc
taccagcccgtccccttcagccaggcaggcaaccccgttatgagcaccgtggccttcctg
gcctccgtggtggacccccgcgtggcctccgcagccgccaagtctgccctggaggagttt
tcccgtatgaaggaggaggtcccagcagcactggtggaggcccatgtgaggagggtggag
gaggcagcgcgggccagtggcagacaggaccccctctacggcctggagggcagcggcatc
gcaggcaccagcctggaggaaggagacaaacctgaagagagcagtgaggagagtaagagt
gacagccaatccagtgaggagaagagggagaccaaggagaataaagatagagccatggag
gaggatgagaagcaaggagaaaatgggaagaaggaggaggagagagggagagagggagaa
ggagagagagaccgagaggctgagaagacagagacagagatgggtgagagagagaaggag
aaggaagggaaggaggccttggaggagggccagagagaaggagagagcgagggagagagg
aaggcgaaggtggagcgggatgtgggagaggggaacctggctaccgctgctgcctccgcc
ctggctgctgctgccgtcaaagccaagcacctggctgcggtggaggagaggaagatcaag
tctctggtggctctgctggtggagactcagatgaagaagctggagatcaaactgagacac
tttgaagagctggagactatcatggaccgagagagggaggctttggagtaccagaggcag
cagctgctggcagaccgtcagtcgttccacatggagcagttgaagtatgcagagatgagg
gcgcgtcagcagcacttccaacagatccagcaccagcagcatagccagactggaggccca
caccccacgggccccccaccccagggcccctcagccatccagtcccagccggcccccagt
atccctgcaccacagccagctcccagcccagcaccctctgcctcctccgtccccatgact
ggcccatcctctgcccaggcccagcccactgagccccagccgccacccagtggtcctcac
acctcacctccccgcccgccatgcctctccagcaccaacaccaccccaacactccacgag
tccagcgcccctggggatacactccactcctcaacccctgctcccactccacagtga
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integrated database retrieval system
