Salmo trutta (river trout): 115150777
Help
Entry
115150777 CDS
T08542
Name
(RefSeq) succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial isoform X1
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00020
Citrate cycle (TCA cycle)
stru00640
Propanoate metabolism
stru01100
Metabolic pathways
stru01200
Carbon metabolism
Module
stru_M00009
Citrate cycle (TCA cycle, Krebs cycle)
stru_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
115150777
00640 Propanoate metabolism
115150777
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115150777
Enzymes [BR:
stru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
115150777
6.2.1.5 succinate---CoA ligase (ADP-forming)
115150777
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115150777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-GeneID:
115150777
NCBI-ProteinID:
XP_029550305
Ensembl:
ENSSTUG00000018838
LinkDB
All DBs
Position
16:complement(42694419..42819113)
Genome browser
AA seq
512 aa
AA seq
DB search
MAASIVSQTVARGLRGASANHLFLDKFKCARVSCRRWLNLQEYQSKKLMQESGVTVQRFY
VADNAPDALQAAKRLGAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPSVVGELAKKM
LGYSLTTKQTPKEGVKVKTVMVAEALDITRETYFAILMDRACNGPVMVGSPQGGMDIEEV
ADKTPELIFKEVIDIFEGVRDDQALRMAANLGFKGPLERQAADQIKRLYDLFLKVDATQV
EVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVFAMDDMSESDPTEMEAAKWDLKYIGLD
GNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKEKQVYEAFKLLTADPKVEAILV
NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGQHYCFWDTTRPVTIRDQCAGGQEDP
VREWTAHCSRQRPGRRCQESCGRHCQEVVALKPSIILTSPFVLSCLFPLLSPPKPQGMYT
NPSALSNLSPSSLIMNNCNIYIGAPLGNDLAS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatccatcgtatcccagactgtagcgagaggattacgcggagcaagcgccaat
cacttgtttcttgacaaattcaagtgtgcacgggtgagttgcaggcgatggctgaacctg
caggagtatcagagcaagaagctgatgcaggagagtggggtgacagtccagcgcttctac
gtggctgacaatgcccccgacgccctgcaggctgccaagagactcggtgccaaggagata
gtcctgaaggcccagattctggctgggggacgagggaagggcgtgttcgacagtggcctt
aaaggcggagtgcacttaactaaagacccctcggtggtgggtgagctggccaagaagatg
ctaggttatagcctgaccaccaagcagactccaaaggagggagtgaaagtaaaaacggtg
atggtggctgaagccctggacatcaccagggaaacctactttgccatcctgatggaccgg
gcctgcaacgggcctgtcatggtgggcagtcctcagggtgggatggacatagaggaggtg
gccgacaaaaccccagagctcatatttaaggaagtcatagatattttcgagggggtgcga
gacgaccaggcgctccgcatggcagcaaatttgggtttcaaaggacctctggagagacag
gctgcagatcagattaagaggctctatgatctgttcctgaaagtcgacgccactcaagtt
gaagtcaatcctctcggagagactcccgaaggacaagtggtgtgctttgatgccaagatc
aattttgacgataacgcagagttccgtcagaaagccgtctttgccatggacgacatgtca
gagagcgatcccactgagatggaggcagccaaatgggacctcaagtacattggcttggat
ggaaacatcgcctgctttgtgaatggggctggtctggctatggccacgtgtgacatcatc
gacctccatggagggaagccggccaacttcctggacctaggaggaggggtgaaggagaag
caggtgtacgaggcattcaaactgctcactgctgacccgaaggtggaagccattctggtg
aacatcttcgggggcatcgtcaactgtgccatcattgccaacggtatcaccaaggcttgc
cgtgagctggagctcaaagtgcctctggttgtcaggctggaaggtcagcactactgtttc
tgggacacaaccaggccagttacaataagggaccaatgtgcaggaggccaagaggatcct
gtcagagagtggactgcccattgtagccgccaacgacctggaagacgctgccaagaaagc
tgtggccgccattgccaagaagtagtggccctcaagccttccataatcctgaccagccct
ttcgttctgagctgcctgttcccactcctcagtccacccaaaccacagggcatgtacacc
aacccttcagccctatcgaacctttcaccttccagtcttatcatgaataactgcaatatt
tatattggtgctcctttaggaaatgacttggcatcctga
DBGET
integrated database retrieval system
