Salmo trutta (river trout): 115150804
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Entry
115150804 CDS
T08542
Name
(RefSeq) interferon regulatory factor 8-like
KO
K04693
interferon regulatory factor 9
Organism
stru
Salmo trutta (river trout)
Pathway
stru04217
Necroptosis
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04625
C-type lectin receptor signaling pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115150804
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115150804
04621 NOD-like receptor signaling pathway
115150804
04625 C-type lectin receptor signaling pathway
115150804
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115150804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115150804
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115150804
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
115150804
NCBI-ProteinID:
XP_029550357
Ensembl:
ENSSTUG00000010762
LinkDB
All DBs
Position
2:complement(12844070..12852349)
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AA seq
432 aa
AA seq
DB search
MASGRVRSTRRLRSWMVDQVTSGKYPGLIWDDDAKTMFRIPWKHAGKQDFRSEEDGAIFK
AWAVFKGKLSDGGRVDPASWKTRLRCALNKSPEFREVPERSQLDISEPYKVYCLVPMNEQ
VLGNVKLKGRARAGGRKRRSSDSDSEEEVKEEEEEVVVKQMKEEVITAPITMSVQEVEES
VLTIQQDQFDQPLVILKSDGTVDELQVNVTIETVPPPGARDSFHVLVKYIGQEVLKREVI
GSDVRIAYLPSSPVPPTLMMGGFPRIPLPESPSTLTSSPGIGPRLQALSTLLPFMEKGVI
LTSTGAGIYAKRYCQGRVFWTGPHSTTTGPHKMNRAVEPVLLFDREAFKMELDHFRSYGG
DPPQCGITLCFGEEFSATEDPSSKLIITQITLPWAQQQVKEAEDFRESMTYLRDIASQSG
DVTINLVPVPYP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggagagttcgctcaacccgcagactacgctcctggatggtagaccaggtc
accagtgggaagtaccctggcctgatatgggacgatgacgccaagaccatgtttcgtatc
ccctggaaacacgccgggaaacaggacttccgcagtgaagaggatggtgccatcttcaag
gcatgggcggtgtttaaggggaagttgtccgatgggggtcgtgtggaccctgcctcctgg
aagacccggctgcgctgtgctctcaataagagcccggagttcagagaggtccccgagagg
tcccagctagacatctccgaaccatacaaagtttactgccttgtaccgatgaatgaacaa
gtgttggggaatgttaaattaaagggccgagccagagcaggagggaggaagagaaggagc
agcgattcagatagcgaggaggaggtgaaggaggaggaggaggaggttgtggtcaaacag
atgaaagaggaggtcatcaccgctccaatcaccatgtctgttcaggaggttgaggaaagt
gttcttaccatccaacaagaccagttcgatcagcccttggtcatcctgaagagcgatggg
acggtcgatgagctccaggtgaacgtcacgattgagaccgtccctccccctggagcacgg
gactcgttccatgtcttagtgaaatacataggacaggaggtgcttaaacgtgaggtcata
ggcagcgatgtccgaatcgcctacctgccctcatcgcctgtcccccccaccctgatgatg
ggtgggttcccacgcatccccctcccagagtccccctccaccctgacctccagccctggc
atcgggcctcggctccaggccctctccacactgctgcccttcatggagaaaggggtgatc
ctgacctccacgggggcagggatctatgctaagcgctactgccagggccgggtgttctgg
acagggccacattcaaccacgacgggaccccacaagatgaaccgtgctgtggagcctgtg
ctgctctttgacagagaggctttcaaaatggagctggaccacttccgcagttacggggga
gaccctcctcagtgtggcatcaccttgtgtttcggagaggagttcagtgccacagaggac
ccatccagcaaactcatcatcacacagataaccctaccctgggctcagcagcaggtcaaa
gaagctgaagacttccgggagtcaatgacctacctccgcgacatagccagccaatcagga
gatgtcaccatcaacctggtaccagtgccttacccctga
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integrated database retrieval system