KEGG   Salmo trutta (river trout): 115150804
Entry
115150804         CDS       T08542                                 
Name
(RefSeq) interferon regulatory factor 8-like
  KO
K04693  interferon regulatory factor 9
Organism
stru  Salmo trutta (river trout)
Pathway
stru04217  Necroptosis
stru04620  Toll-like receptor signaling pathway
stru04621  NOD-like receptor signaling pathway
stru04625  C-type lectin receptor signaling pathway
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    115150804
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    115150804
   04621 NOD-like receptor signaling pathway
    115150804
   04625 C-type lectin receptor signaling pathway
    115150804
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115150804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115150804
Transcription factors [BR:stru03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    115150804
SSDB
Motif
Pfam: IRF IRF-3
Other DBs
NCBI-GeneID: 115150804
NCBI-ProteinID: XP_029550357
Ensembl: ENSSTUG00000010762
LinkDB
Position
2:complement(12844070..12852349)
AA seq 432 aa
MASGRVRSTRRLRSWMVDQVTSGKYPGLIWDDDAKTMFRIPWKHAGKQDFRSEEDGAIFK
AWAVFKGKLSDGGRVDPASWKTRLRCALNKSPEFREVPERSQLDISEPYKVYCLVPMNEQ
VLGNVKLKGRARAGGRKRRSSDSDSEEEVKEEEEEVVVKQMKEEVITAPITMSVQEVEES
VLTIQQDQFDQPLVILKSDGTVDELQVNVTIETVPPPGARDSFHVLVKYIGQEVLKREVI
GSDVRIAYLPSSPVPPTLMMGGFPRIPLPESPSTLTSSPGIGPRLQALSTLLPFMEKGVI
LTSTGAGIYAKRYCQGRVFWTGPHSTTTGPHKMNRAVEPVLLFDREAFKMELDHFRSYGG
DPPQCGITLCFGEEFSATEDPSSKLIITQITLPWAQQQVKEAEDFRESMTYLRDIASQSG
DVTINLVPVPYP
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcatctgggagagttcgctcaacccgcagactacgctcctggatggtagaccaggtc
accagtgggaagtaccctggcctgatatgggacgatgacgccaagaccatgtttcgtatc
ccctggaaacacgccgggaaacaggacttccgcagtgaagaggatggtgccatcttcaag
gcatgggcggtgtttaaggggaagttgtccgatgggggtcgtgtggaccctgcctcctgg
aagacccggctgcgctgtgctctcaataagagcccggagttcagagaggtccccgagagg
tcccagctagacatctccgaaccatacaaagtttactgccttgtaccgatgaatgaacaa
gtgttggggaatgttaaattaaagggccgagccagagcaggagggaggaagagaaggagc
agcgattcagatagcgaggaggaggtgaaggaggaggaggaggaggttgtggtcaaacag
atgaaagaggaggtcatcaccgctccaatcaccatgtctgttcaggaggttgaggaaagt
gttcttaccatccaacaagaccagttcgatcagcccttggtcatcctgaagagcgatggg
acggtcgatgagctccaggtgaacgtcacgattgagaccgtccctccccctggagcacgg
gactcgttccatgtcttagtgaaatacataggacaggaggtgcttaaacgtgaggtcata
ggcagcgatgtccgaatcgcctacctgccctcatcgcctgtcccccccaccctgatgatg
ggtgggttcccacgcatccccctcccagagtccccctccaccctgacctccagccctggc
atcgggcctcggctccaggccctctccacactgctgcccttcatggagaaaggggtgatc
ctgacctccacgggggcagggatctatgctaagcgctactgccagggccgggtgttctgg
acagggccacattcaaccacgacgggaccccacaagatgaaccgtgctgtggagcctgtg
ctgctctttgacagagaggctttcaaaatggagctggaccacttccgcagttacggggga
gaccctcctcagtgtggcatcaccttgtgtttcggagaggagttcagtgccacagaggac
ccatccagcaaactcatcatcacacagataaccctaccctgggctcagcagcaggtcaaa
gaagctgaagacttccgggagtcaatgacctacctccgcgacatagccagccaatcagga
gatgtcaccatcaacctggtaccagtgccttacccctga

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