Salmo trutta (river trout): 115150816
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Entry
115150816 CDS
T08542
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecule (CAM) interaction
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115150816
04519 Cadherin signaling
115150816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115150816
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Major cadherins
115150816
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Ig_CLSTN
Fibulin_C
F59B103_C
NCMAP
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
115150816
NCBI-ProteinID:
XP_029550367
LinkDB
All DBs
Position
16:complement(44209013..44445032)
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AA seq
926 aa
AA seq
DB search
MNLGSVLILTCTLLVDTSWATKADQPPKPPCRPGFSESFYTVFVSRDLLRGQSILKDTTL
SSERVKFDDCQHSKAVDFESSDPNFSVRPDGSVYAEQEVANLSEPVQFMVTARGGHDPHI
WETTVKLALAGHPPSVPVSQIGVEDMIARAWDSNPRVIKFPRKHQRSSFANSLRRQKRDW
VIPPINVPENSRGPFPQMLVRIRSDQDLEKGIRYSITGAGADQPPIDVYNIDPVHGKMFV
TRPLDREERASYHLRAHAVDMNGNKVESPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSK
PGTLVMQVTANDSDDDTTANGMVRYRILSQTPHMPIPNMFTINSETGDIFTVAAGLDREK
VSQYTIIVQATDMEGNLNFGLSNTATALISVTDINDNPPELTARTFSGEVPENRVNVVVA
NLTVIDRDQPHSPNWAAQYRIASGDPQGHFLIRTNPVNNDGMVTVVKPVDYEQNRAFMLT
VIVSNKAPLASGIQSSLQSSAGVTISVQDVNEPPVFPSNPKSIRFEEGVPAGTTLTVFAA
QDPDLFIHQTVRYSKLSDPANWLRINRTNGQITTMAVLDRESMYVRNNIYEATFLAADNG
SPPASGTGTLQIHLIDVNDNAPVLLPKEAQVCERASPRSRVNITASDADADPHVGPFVFE
LPSYPPSVRRNWTASRISGDYAQLRLRIPYLDAGVYDVPIIVSDSGNPPLSNRSMIKVKV
CPCDDNGDCTTTGAVAAAGLGTGAIIAILICIIILLTMVLVFVMWMKRREKERQAKPLLI
DPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPEALDHIICKPTGVRRVDERPVIAESQY
PVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGD
QDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaggctccgttcttatactgacgtgcaccttacttgtggacacatcttgggcg
accaaggcagaccaaccacctaaacccccatgcagaccaggcttttccgagagcttctac
acagtgtttgtctctagggatctactgcgaggccagagcattctcaaagacaccaccctg
tcgagtgaacgtgtgaagtttgacgactgtcagcacagcaaggctgtggacttcgagagc
agtgaccctaacttcagtgtgcgtcctgacggctcggtgtacgcggagcaggaggtggcc
aacctgtctgaaccagtccagttcatggtgaccgcccgcggaggtcatgaccctcatatc
tgggagaccacggtcaagctggccttggctggccacccgccttctgttcctgtgagtcag
attggagtggaggatatgattgcaagggcctgggactctaatcccagggttatcaagttt
ccacggaaacatcaaagaagctcttttgccaatagtctgagacgacagaagcgagactgg
gtcatcccaccaatcaatgtgcccgaaaactctagaggacccttcccacaaatgcttgtc
agaatccgctcggaccaggacctggagaaagggatccgctacagcatcactggagcaggg
gcggaccagcctcccattgacgtgtacaacattgaccctgtgcacggcaagatgtttgtc
accagacccctggacagagaggagagggcctcctaccatctgcgggcccatgctgtggac
atgaacgggaacaaggtggaaagccccatagacctgtacatctacgtcatcgacatgaat
gacaaccggccagagttccagaaccaggtctacaacggctctgtggctgaaggctctaaa
ccaggcacgttagtgatgcaggtgaccgccaacgactcagatgacgacaccacagccaat
gggatggtgcgctaccggatcctatcccagaccccccacatgccaatccccaacatgttc
accatcaacagcgagacgggagacatcttcacggtggccgccggcttggacagggagaaa
gtgtcccagtacaccatcatcgtccaggccacggacatggaggggaacctgaactttggc
ctgtccaacacggccaccgccctcatctctgtgaccgacatcaacgacaaccctcccgag
ctgaccgccaggacgttttcgggggaggtcccagagaacagggtgaatgtggtggtggcc
aatctgacagtgattgacagggatcagcctcacagccccaactgggctgcccagtaccgc
atcgccagcggagacccccagggtcacttcctcatccgcaccaaccctgtcaacaatgac
ggcatggtcactgtggtcaagccggtggactatgagcagaacagggccttcatgctgacg
gtgatagtctctaacaaggcccctctggccagtgggatccagtcttctctccagtcttca
gcgggggtcaccatctccgtacaggatgtcaacgaaccccctgtcttcccttccaacccc
aagtccatccgtttcgaggagggtgtccctgcaggcaccacactcaccgtgtttgctgcc
caagaccctgacctcttcatccatcagactgtccggtactcgaagctgtctgacccagct
aactggctgaggatcaacaggaccaacggtcagatcaccaccatggccgtgctggacagg
gagtccatgtacgtcaggaacaacatctacgaggccaccttcctggctgccgacaatggc
tctcccccagccagtgggacaggtactctacagatccatctgatagatgtgaatgacaac
gctccagtgctgttgcccaaggaggcccaggtgtgtgaacgcgccagcccccgctccagg
gtcaacatcacagcttccgacgccgacgctgaccctcacgtggggccttttgtgttcgag
ctgccctcctacccccctagcgtccgacgcaactggaccgcctcccgcataagcggtgac
tatgcccagctgagactgaggattccctacctggatgcaggggtgtatgatgttcccatc
atagtgtcggactctgggaacccgcccctctctaacaggtctatgataaaggtcaaggtg
tgtccgtgtgatgacaacggagactgtactaccaccggagctgtagctgccgccggactg
gggaccggagcgatcatagccatactcatctgtatcatcatactgcttacaatggtactg
gtgtttgtgatgtggatgaagcggagggagaaggagcgtcaggccaagcccctgctgatc
gacccagaggacgacgtcagagacaacatcctgaaatacgatgaggagggaggaggagag
gaggaccaggactatgacctaagccagctgcagcagcccgaagctctggaccacatcatc
tgtaaaccaacgggagtgcgcagggtggacgagaggcctgtcatcgctgagtcccagtac
cccgtcagacccagcctgcctcatcccggagatatcggagacttcatcaacgacggtctg
agggcagcagacaacgaccccacagccccgccctatgactccctgctggtgtttgactac
gagggcagcggctccacagccggctctgtcagctccctcaactcctcaagctcaggggac
caagactacgactacctcaacgactggggcccccgcttcaagaagctggctgacctctac
ggcggaggagacgacgactga
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