Salmo trutta (river trout): 115150843
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Entry
115150843 CDS
T08542
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
stru04980
Cobalamin transport and metabolism
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115150843
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
115150843
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115150843
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115150843
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115150843
03029 Mitochondrial biogenesis [BR:
stru03029
]
115150843
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115150843
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
115150843
HMT complexes
COMPASS/SET1 complex
115150843
MLL-HCF complex
115150843
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115150843
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115150843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Motif
Other DBs
NCBI-GeneID:
115150843
NCBI-ProteinID:
XP_029550424
Ensembl:
ENSSTUG00000034680
LinkDB
All DBs
Position
16:complement(45355584..45373150)
Genome browser
AA seq
1696 aa
AA seq
DB search
MTGSMVSGTTGSTLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHV
YNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWK
KLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAG
SSVVGWDIPITYGVLPPPRESHTAVVYTEKDSKKSRLIIYGGMSGCRLGDLWTLDIDTLT
WTKPSVNGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNL
DSMAWESVVMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLET
ERPHAPSRVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPAATAVTSPALNAATSLQG
NLPKSPATAAPSAQNLPHTGITIVPQASSPTILPNMPRSPLAASTARGPAILKVAAPPSG
TGTSLVTVRPNQAGKSPVTVTSLLPGVRMVVPAQTAQGTPVGNSPQMSGMAALAAAAAAT
QKIPPSSSTVLNIPAGATLVKTMAVSPGSTTVKMASPLMVSNPATRMLKTAAAQVGTATV
SSPNSPNRPIITVHKSGTVTVAQQHQVVTTMVGGVTKTITLVKSPLTMGGSGTLQISNLG
KMMSVVQTKPVQTSAVTGQASTNPLTQLIQTKGSLPAGTILKLVTSADGKPTTIITTSQA
GGTGNKPTILNISGMSPTTTKQGTTIIKTIPMSAIMTQPGATVTSSTGKTPYTIITTKMM
TTGTPGKIITTMPKLGTATGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTMSSVK
PNVTTLVVKGTTGVTTLGTVTGTVSSSLAGSFVASANASLATPITTLGTIATLSSQVINP
TAITVSAAQTSLTTATTLSTSTMSANQPTQVTLITTPSGVEAQPVQDLPVSFLASPTSEQ
PSSTEVGDAPGTVTMVCSNPPCETHETGTTNTATTASSDIGGVQRVCSNPPCETHETGTT
NTATTASTDMGGAMRTTTSSSPGTATGKQGPENLSTGTTFTPTTACSNMGSAQTGTVQSP
KPAMGSTVCLNPPCETHETGTTNTATQSLSSMGNGQTGTVQRVCSNPPCETHETGTTNTP
SQANSNMAGNQTGTVQRVCSNPPCETHETGTTNTATTATADGADSATSSTETPSTTASET
TPATIQSRAITTVTQSTPAPGPSVPSILSITEGAAGSTEEPMQTDTATEGRETAMETGLS
PELSEGQMGTGLSAEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGDSGST
GQQAITLPIVLTQQELAALVQQQHQLQEAQAQAQAQAQAQAQAQAQAQAQAQAQAQQQGN
AQALPTEGLAPADSLNDPASESNGHPEMAAAVSSAVASLLSRTSTETLAPSSTFAVASPA
KLQAAVAEVANGIEGGKLNPQPAPIKTLVKKENQWFDVGIVKVTNMVVTHFFIPEDDSQV
EDDSGAIPDYNQMKKMELQPGTAYKFRVAGINACGRGSFSEISAFKTCLPGFPGAPCAIK
ISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSTQTAEPKASTPAQLAFMRVYCGPNPSC
LVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGASAKPAPKRPVS
SPDAKAAGQKKARTDQ
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgactggttccatggtgtctgggaccactggttcaactctacagccacgatggaagcgg
gtactgggatggtctggccctgtccctcggcccagacatggtcacagagccgttgctata
aaggaattgatggttgtttttggaggaggaaatgaaggaattgtggatgagttacatgtc
tacaacacagcaacaaaccaatggtttatccctgcggttcgtggtgatattccccctgga
tgtgctgcatacggttttgtttgtgatggcacccggcttctggtttttggtggaatggtg
gaatatggaaaatacagcaatgatctctatgagctacaggccagcagatgggaatggaaa
aagttgaaagctaagactcccaaaaatggcccacctccctgtcctcgacttggccacagt
ttctcgctggtgggtaacaagtgctacttgtttggaggactggctaatgacagcgaggac
cccaaaaacaacatccccagatacctgaatgatctgtacaccctggagcttcgtgctggc
tccagtgttgtgggctgggatataccaattacttacggtgttttgccgcctcctcgcgag
agccacactgccgtagtgtacacagaaaaggacagcaagaaatctcgcctgattatctat
ggagggatgagtggctgtcgtctgggagatctatggacccttgacatcgacaccctgacc
tggactaagccatcagtgaatggcacagcacctctgcccaggagtcttcactctgccacc
accatcacaaacaagatgtttgtgtttgggggatgggttcccctggttatggatgatgtg
aaggtggccacacatgagaaggaatggaagtgcacaaacacactggcctgcctaaatctc
gactccatggcctgggaatcagtggtgatggatactctggaggacaatatcccaagggct
cgggcaggacattgctctgtggccatcaactctaggttgtatgtctggagtggccgtgac
ggttaccgtaaagcgtggaacaaccaagtctgctgtaaagacctctggtaccttgaaaca
gagaggccacacgctccctcgagagtgcagctagtccgtgccaacaccaactccctggag
gtaagctggggcgctgtgtccaccgcagacacctacctgctgcagctacaaaagtacgac
attccagccgccactgctgtgacctcgccggccctcaatgccgccacctctctgcaaggg
aacttgcctaagagcccagccacagctgctccctctgctcagaacctaccacacacaggt
atcactattgtgccccaggcttcctcccctactatccttcccaacatgcccagaagcccg
ctggctgcctccacagctcgtgggccagctatcttgaaggtggcagcgcctccatctggc
acgggtacctcccttgtcactgtgcgaccaaaccaggctgggaaatcccctgtcactgtg
acatcacttcttccaggagttcgcatggttgttcctgcccagaccgcccaaggaacacca
gtcggcaacagccctcagatgagtggcatggcagctttggctgcagctgcagcagccaca
cagaagatcccaccctcttcaagcactgtactcaacattccagcaggtgccacccttgtc
aaaaccatggctgtctcccctggctccaccacagtcaaaatggcatctcctctcatggtt
agtaacccagccactcgcatgctgaagacagctgcagctcaggtgggcacagcgaccgta
tcgtcacccaactcgcccaacagacccatcattactgtgcacaagtcgggcacggttacc
gtagcccagcaacaccaggtggttaccaccatggtgggaggagtcaccaagaccatcacc
ctggtcaagagccccctcacaatgggaggcagcggcactttgcagatctccaaccttggc
aagatgatgtctgtggtacaaaccaagccagtgcagacatcagctgttacaggccaggct
tccactaaccctctcacacagctcatacagactaagggttctctccctgccggcaccata
ctgaagctggtgacctcagcggacggcaagcccaccaccatcatcaccacgtcccaggcg
ggaggaacagggaacaaacccaccatcctgaacatcagcggcatgtcgcccaccacaacc
aaacagggcaccaccatcatcaagaccatccctatgtctgctattatgacccagcctgga
gccacagtgaccagcagcacagggaagacgccctataccatcatcaccaccaagatgatg
accactggcactccaggcaaaatcatcactaccatgcccaagcttggcactgcaactggc
cagcaagggctgacacaggtggttttgaagggagctccgggccaacctggcaccattctg
cgcactgtacccatgggtggagtccgactcgtcaccccggtcacgatgtcttctgtcaag
cccaatgtaactacactggtcgtcaagggaacaactggtgtcaccaccctggggactgtc
acagggacagtctcctccagtctggcagggagctttgtagccagtgccaatgcctctctg
gcaactccaatcaccaccctgggcaccatcgccaccctgtccagtcaagttatcaacccc
actgccatcactgtgtcagcagcccagaccagtctgaccacagctactaccctttccact
tccaccatgtcggcaaaccagccaacccaggtgactctcatcaccacccccagcggggtt
gaggcccagccagtgcaggacctgcctgtgtccttcctggcctcccccacctctgagcag
ccctcttctactgaggtcggcgatgcccctggcactgtcaccatggtctgctccaacccc
ccctgtgagacccacgaaacaggaaccaccaacaccgcaaccacagcctcctccgatata
ggtggggtgcagagggtctgctccaaccccccctgtgagacccacgagacgggcaccacc
aacaccgcaacgaccgcctccaccgacatgggcggggcaatgaggacgaccacctcttct
tcccccggaaccgccacaggcaaacagggaccagagaacctgagcaccggcaccacattc
acccccaccacggcatgctccaacatgggctcagcccagaccggaactgtgcagagtcca
aagccagccatgggctctacggtgtgcttaaacccaccctgcgagacacatgaaacaggc
acaaccaacactgccactcagtccttgtccagcatgggtaatgggcagactggcactgtg
cagagggtgtgctcaaacccaccctgcgagacccacgaaactgggaccaccaacaccccg
tcccaggccaactcaaacatggccgggaaccagactggcactgtgcagagggtgtgctcc
aaccccccctgtgaaacccatgagactggcaccaccaacaccgcaactactgccacagca
gatggagcggacagtgccaccagcagtacagagactccttccaccactgcatcagaaaca
accccagccaccatccagagcagagccatcactactgtgacccagtccacaccagccccg
gggccctcagtaccttccattttgtcgatcactgagggtgcagcaggttccacagaagag
cccatgcagacagacacggccacggaggggagagagacggctatggagactgggctgtcc
ccagagctgtcagagggacagatggggacaggtctgtctgcagaggagctggctgtgacc
gcagcagcggaggcagcggcgcaggctgcagccacggaggaggcccaggccctggccatt
caggcagtcctccaggcagcacagcaggcagtcatgaacgagggtgattctggctcgacc
ggacagcaggccatcacactccccatcgtcctgacccagcaggagttggcagccttggtc
cagcagcagcaccagctccaggaagctcaggcccaggctcaggcccaggctcaggcccag
gctcaggcccaggctcaggcccaggctcaggcccaggctcaggcccagcagcaaggaaac
gcccaggccctacccactgagggccttgcccccgcagacagcctcaacgaccctgcgtct
gagagcaacgggcacccagagatggctgcagctgtctccagcgctgtggcatcactgctg
tcgcgcacatccactgagaccctggccccctcaagcacatttgctgttgccagtccagcc
aagctgcaagctgctgtagcagaggtggccaatggcattgagggtgggaagctaaaccct
caaccagcccctatcaagactcttgtaaaaaaagagaaccagtggtttgatgttggcatt
gtcaaggtgacaaacatggtggttacgcacttcttcatcccagaggacgattctcaagta
gaggatgactcgggcgccatcccagactataaccagatgaagaaaatggagctgcaacct
ggcacagcctacaagttccgtgtcgctggcatcaacgcttgtggtcgtggttccttctca
gagatatctgcttttaagacctgtttaccaggcttccctggagcaccttgtgccatcaaa
atcagcaagagcccagatggtgcccacctcacctgggagcctccctcggtgacatcaggg
aagatcattgagtactctgtgtacctggccatccagagcacacagacagctgagcccaag
gcctccaccccagcccagctggccttcatgcgggtgtactgtgggcccaacccctcctgc
ttggtgcagtcctccagcctctccaatgcccacatagactacaccaccaagcccgccatc
atcttccgcatagctgcgcgcaacgagaagggctacggccctgccacacaagtcaggtgg
ctgcaagagtccagcaaagatggagcctcggcaaaacctgccccaaaaagaccagtttcc
tcgcctgatgctaaggctgctggtcaaaagaaagcaagaacggaccagtga
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