Salmo trutta (river trout): 115150879
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Entry
115150879 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115150879
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115150879
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
115150879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
Sina_ZnF
PDZ_Tricorn
zf-rbx1
RING_XB3-XBAT31
U-box
zf-TRAF
zf-RING_6
TRAF2_zf
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
115150879
NCBI-ProteinID:
XP_029550513
Ensembl:
ENSSTUG00000035228
UniProt:
A0A674C8H3
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All DBs
Position
16:complement(47254799..47378534)
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AA seq
1054 aa
AA seq
DB search
MGFELDRFKGAVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQSSCPVKCQRIS
TKELNHVLPLKNLIMKLDIKCDNHARGCEKVVKLQHLAEHTEMCDYSPAKCRNKGCNEVF
NLKDMDAHMRESCDCRPVGICENGCGLMLTHKEQKLDTHCCLKALKAHNSALHVKVVSLD
KEFKKQSLKSSKREKSLLAQLSAVHNELQMTALKYQKKFTENSARIDSLTKTLAPPCKGG
ETKNVTAILHREGGSLGFNIVGGRPCTDDHDGPSNEGIFVSKIVENGPADKEGGLQIHDR
IMEVNGKDLSKVTHDQAVEAFRTAKEPIMVQVLRRAPRPKPSSPASDTQVVDISTQTDIT
FQHIMALTKLPAAAPTVAVLEQYLMPEEHSPGHEYFDPNDFLEGMQQEMEREELEYEEVD
LYRANIQDKLGLTVCYRTDDEDETGIYVSEIDPNSIAAKDGRIREGDRIIQINGIEIQNR
EDAVALLTSEENQNVCLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEQQHHQAMQFTAS
MLQQKKREEDGGTTDTATLLSNHHEKDSGVGRTDESTRNDESSEQENLGDDQTAASNTLG
SCSRRKLAYSQDTLGSVDLPFSGESFISADYDHADFLGIPADECERFRELLELKCQVRSA
GGPQELYCQSAGARGAEEGVDKELELLNEELRSIELECLNIVRAHKMQQLREQYRESWML
HNSGFHNYNTSIDARRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRR
GAENQGESGASSSTGPNSRILKPLLSPVQEAGDPSRIRPSSSKESECGVQVEGKEHKLGE
STHKLAQPRSLYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSLVSRGDPVNPGD
ILDPKMEWKVKIRSDGTRYITKRPVRDKLLKERALRIHEERSGMTTDDDAISELKMGRYW
SKGERKQHAVRAKEQKQRREFMKQSRADCLKEQASLDDDKKEPNIIELSHKKMMKKRNKK
IFDNWMTIQELLTHGAKSPDGTRVYNSLLSVTTV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgagttggatcggtttaaaggggctgtggacccagattttaaatgcaatttg
tgtaataaagttctagaagacccgctcactactccgtgtggtcacgtcttctgcgctggc
tgtgtgctgccttgggttgtccagcaaagcagttgccccgtcaaatgtcaaaggatctcc
acgaaagagctgaaccacgttctccctctgaaaaacctgattatgaagctggacataaag
tgtgacaaccatgccagaggctgtgaaaaagtggtgaagctgcaacatctggcagagcac
accgagatgtgcgattactcgccggcaaaatgcaggaataaaggatgcaacgaggtgttc
aatctgaaggacatggatgcacatatgcgcgaatcgtgtgattgcagaccggtcgggata
tgcgaaaatggatgtggattgatgctcacccacaaagagcaaaaactagacacccattgc
tgtttgaaagccctgaaagcacataatagtgcattgcacgtgaaggtggtcagcttggac
aaagagttcaagaagcaatctttgaaatcgagcaaaagagagaaatctcttcttgctcaa
ctctctgctgtgcataatgagctacaaatgacagcactgaagtatcagaagaaattcact
gaaaacagtgcaaggatcgactcgctgactaagacccttgctcccccgtgcaagggtggg
gagaccaaaaacgtcacagccatccttcatcgggagggcggttctctgggcttcaacatc
gtgggaggaagaccatgtacggacgaccatgatggcccttcgaatgaagggatctttgta
tcgaagattgttgagaacggaccagcagacaaggagggaggccttcagatccacgacaga
ataatggaggtgaatgggaaggacctgtccaaggtcacccatgaccaggcagtggaggcc
ttccgcacagccaaggagcccatcatggtccaggtacttcgccgggccccccgccccaaa
ccctccagccctgcctcagacacccaggtggtggacatcagcacccaaacagacatcacc
ttccaacacatcatggccctcaccaagctgcctgctgccgcccccaccgtggctgtgttg
gagcaatacctcatgcctgaggagcattcccccgggcacgagtacttcgaccccaatgat
ttcctggagggcatgcagcaggagatggagcgagaggagctggaatatgaggaagtggat
ttgtacagagccaacatccaggacaagcttgggttgaccgtctgctacaggactgatgat
gaggacgagactgggatctacgtcagtgagattgacccaaacagcatcgctgcgaaggat
ggcaggatcagagagggagatagaattatccagatcaacgggattgagatccagaaccga
gaggatgctgtggctttgttgaccagtgaggagaatcagaatgtgtgtctactggtggcc
agaccagagatccagctggatgagggctggatggatgatgacaggaatgacttcctggat
gacctccacatggacatgctggagcagcagcaccaccaggccatgcagttcaccgccagc
atgctgcagcagaagaagcgtgaggaggatggtggaacgactgacacagccaccctgttg
tccaaccaccacgagaaagacagtggggttggccgcaccgacgagagcacgcgcaacgac
gagagctctgagcaggagaacctgggggacgaccagaccgcggcctccaacacgctgggc
agctgcagccgcaggaagctggcctacagccaggacaccctgggaagcgttgacctgccc
ttcagcggtgagtccttcatctctgcagactacgaccacgctgacttcctgggtatcccc
gccgacgagtgtgagcgcttccgagagctcctggagctgaagtgccaagtgaggagcgcg
gggggcccccaggagctgtactgccagagtgcaggggctagaggggccgaggagggggtg
gacaaggagctggagctgctgaacgaggagctacgcagcattgagctggagtgcctcaac
atcgtccgggcccacaagatgcagcagctgagggagcagtaccgtgagtcctggatgctg
cacaacagcggcttccacaactacaacaccagcatcgacgcgcgccgccatgagctctcc
gacatcacagagctgcccgagaagtcagacaaggacagctccagcgcctacaacaccggt
gagagctgtcgcagcacccccctcaccctagagctgtccccagacaactccctccgcagg
ggggcagagaaccagggcgagtctggggcctcaagcagcacagggcccaacagcaggatc
ctcaagcctctgctgtcccctgtccaggaggccggtgaccccagcagaatcaggccctcc
tcctctaaggagtctgagtgtggcgtgcaggtagaggggaaggagcataagctgggagag
tctactcacaagctggcccagccccgctccctgtacaaacacgcccacatcccggcccac
gcccagcactaccagagctacatgcagctgatccagcagaagtctgccgtggagtacgcc
cagagccagatgagcctggtcagtctggtcagccgcggtgaccccgtgaaccccggagac
atactggatcccaagatggagtggaaggtgaagatccgcagcgacggcacgcgctacatc
accaagaggcccgtcagggacaagctgctgaaggagcgcgccctgcgtatccacgaggag
cgcagcggcatgaccacggacgacgacgccatcagcgagctgaagatggggcggtactgg
agcaagggggagaggaagcagcacgcggtgcgcgccaaggagcagaagcagcgccgcgag
ttcatgaagcagagccgcgctgactgcctgaaggaacaggccagcctggacgacgacaag
aaggagcccaacatcatcgaactgagccacaaaaagatgatgaaaaagaggaacaagaaa
atctttgacaattggatgactatccaggaacttttgacccacggtgctaagtcgcctgac
ggcacgcgagtgtacaactccctcctgtccgtcaccactgtgtag
DBGET
integrated database retrieval system
