KEGG   Salmo trutta (river trout): 115150935
Entry
115150935         CDS       T08542                                 
Name
(RefSeq) WD repeat-containing protein 82 isoform X1
  KO
K14962  COMPASS component SWD2
Organism
stru  Salmo trutta (river trout)
Pathway
stru03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    115150935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115150935
   03036 Chromosome and associated proteins [BR:stru03036]
    115150935
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     115150935
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     115150935
    COMPASS/SET1 complex (yeast)
     115150935
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C WD_LRWD1 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 VPS8_N MinC_C
Other DBs
NCBI-GeneID: 115150935
NCBI-ProteinID: XP_029550641
Ensembl: ENSSTUG00000048278
UniProt: A0A674ELM6
LinkDB
Position
16:49416841..49420294
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILVSTNGGALRLLDAFKGAVMHSFGGYNNSKA
VTLEASFTPDSQFIMIGSEDGKVHVWNAESGMKVAVLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaatgtgctgcggagcttcagggttgcaaaggttttccgggaaaat
tcagacaaaatcaactgttttgatttcagctcaaacggcgaaaccatcatttctagcagc
gacgacgactccctagttttatacgactgccaggagggaaaacccaagcggaccctctat
agtaagaagtatggagtggatctgatcaggtacacacatgcagccaacactgtggtgtac
agctccaacaaaattgatgacactatccggtacctctccctccatgacaacaagtacatc
cggtacttccccggacacaacaaaagagtgacgtctctctccatgtcccctgtggatgac
acgtttatctcaggatctttagacaagacaatccggctatgggatctgcggtctccaaac
tgccagggcctgatgcacctacaggggaagcctgtttgctcatttgatccggagggtctg
atctttgctgctggcgtgaactcggagatggtcaaactgtacgacctgcggtcctttgac
aagggtccttttgctaccttcaagctacagtacgaccgtacgtgtgagtggacaggactc
aagttcagcaacgatgggaagctcatccttgtctcaaccaatgggggtgctctccgcctc
ctcgacgccttcaagggagctgtgatgcattcctttgggggctacaacaacagcaaagct
gtgacgctggaggcctccttcactcctgattctcagttcattatgattggctctgaggat
gggaaggtccacgtttggaatgcagagagtgggatgaaggtggctgttctggatgggaag
cacacgggtcctgtcacctgccttcagttcaaccccaaattcatgacttttgctagtgct
tgttcaaacatggcattctggctgcccaccattgacgattga

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