Salmo trutta (river trout): 115151040
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Entry
115151040 CDS
T08542
Name
(RefSeq) spermatogenesis-associated protein 13-like isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
stru
Salmo trutta (river trout)
Pathway
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115151040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115151040
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115151040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
DUF664
PH_5
Motif
Other DBs
NCBI-GeneID:
115151040
NCBI-ProteinID:
XP_029550823
Ensembl:
ENSSTUG00000012685
LinkDB
All DBs
Position
2:13826612..13846598
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AA seq
832 aa
AA seq
DB search
MRGRSTFTLVEEREAGERTVEDLKERETQASGQRPASGLSLAMVLIHCVHFQCVWTRPDQ
DQEDQEVRGHLWGTLDEQGREALLGGEETPPPSATSTPSLTPTCPPESPTSSMSPTKIGS
TETSTSFIPRQRAGRSRPRPISDYAQLVARKYAIPEEETELHPKERTKNGTPCQDCKSNG
GSQDSDSPENYNMNGDLQCRRRRPMSVIGGAEEREDRLTSPLSRPPVPSHQVPPYKAVSA
RFRPSTFSQSTPIGLDRLGRRKLHRLLSVEDAGSERSAAVDGDSVSEEEGSFDELSDVTT
YLQPGVELSALSQWISQGQAVYAEALWDHVTMEEQELAFKAGDVIRVLEAPHKDWWWGMG
ADREAWFPSSFVRVRVNQEEDSGAESVESCALDQEDPHTATRDTHTHSAEHREQMRTNVV
KEIMNTERIYIKHLRDICEGYIRQCGKHPGMFTELQLKTIFSNIEDIYKFQRQFLKDLER
KYNTDQPHLSEIGACFLLQGEGFSIYSEYCNTHPAACGELQRLMKLGRYKHFFEACRLLQ
QMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYGGVSDAYEAMKNVASLINEGK
RRLESVDAIAHWQVAILHWEGADVLERSSELIHSGELTRIVRQGNKTQQRSFFLFDHQLV
FCKKDVLRRDLLHYRGRLDMDNTSVLQMPDGRDPELGILLRNALRLRNSSTLETLCYLCC
RKPQDRQRWLQAFARERQRVQEDQEMGMKISETQRKQAIFNARRSKQGKMKTIGYSGSVP
PHHHHQPLHPIHQRHVTVPTSVPQQQVFTLAEPKRKPAHLWYTFTRHALFRK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaggggaaggagcacatttactttagttgaagagcgagaagcaggggaacgtacagta
gaggacctaaaggagagggagacccaggcctcgggacagaggcctgccagtgggttgtca
ttggccatggtgctgatccactgtgtacatttccagtgcgtatggaccagaccagaccaa
gatcaggaggaccaggaggtaagaggacatctctggggtacgttagacgaacagggcaga
gaggcactattagggggtgaagagacgccccctccttcagccaccagtaccccttctctc
acaccaacatgtcccccagagtctcccacttcatccatgtcaccaacgaaaataggttcc
acagaaacgtccacgtccttcatccccaggcaaagggcgggccgatcgaggcctcggcca
atctctgactacgctcagctggtagccaggaagtacgccatccccgaggaggagacagag
ctacatcctaaggagaggactaaaaatggaactccctgtcaagactgcaaaagcaatgga
ggctcgcaggacagtgacagcccagagaactacaatatgaatggagatctccagtgccgg
aggagacggccaatgtctgttattggaggagctgaggagagagaggaccgtctgacttct
cccctgtcgcgcccccctgtcccgtcccaccaggtgcccccctacaaagcggtgtcggcc
aggttccgcccctccaccttctcccagagcacccccatcggactggaccgcctcggacga
cgcaaactacacagactcctcagtgttgaggacgccggctcagagcgttctgcagcggtg
gatggtgacagtgtgagtgaggaggaggggagctttgatgagctcagtgatgtcacaacg
tacctgcagcctggggtggagctgtctgctctcagccagtggatcagccagggtcaagca
gtgtatgcggaggccctgtgggaccatgtgacgatggaggagcaggagctggcgttcaag
gcgggggatgtgatccgggtgctggaggcccctcacaaggactggtggtggggcatgggg
gcagacagggaggcctggttcccctctagcttcgtcagggtgcgtgtgaaccaggaggag
gactcaggagcagaaagtgtagagagttgtgctctggaccaagaggacccacacactgcc
acccgggacactcacacacacagcgccgagcaccgtgagcagatgaggactaatgtggtc
aaagagatcatgaatactgaacgcatctacatcaaacatctccgggacatctgtgagggc
tatatccgtcagtgtggtaaacacccgggcatgttcactgagctgcagctgaagaccatc
ttcagtaacatcgaggacatctacaagttccagagacagttcctcaaagacctggagagg
aagtacaacacagaccagcctcacctcagtgagataggagcctgtttcctcttacagggg
gagggtttttccatctactctgagtactgtaacacccaccctgcagcgtgtggagagctg
cagcgcctcatgaagctgggcaggtacaagcacttctttgaggcctgccggctgctgcag
cagatgattgacatctccatcgccggcttcctgctcacgcccgtccagaagatctgcaag
taccccctgcagctgggagagctgctcaaatacacccccaaagaccacagtgactatggt
ggagttagtgacgcgtacgaggcgatgaagaatgtggcgagcctgatcaacgaggggaaa
aggaggctggagagtgtcgacgccatcgctcactggcaggtggccatcctacactgggag
ggagcggatgttctggagcgcagctcggagctgatccactctggggaactcacccggatc
gtccggcagggcaacaagacgcagcagcgcagcttcttcctgttcgaccaccagctggtg
ttctgtaagaaggatgtactgcgccgcgacctgctgcactaccgtggtcgtctggacatg
gacaacacatcggtgctgcagatgcctgatggcagggaccccgagctgggcatcttgctg
aggaacgccttgcggctccggaacagctccaccctggagaccctgtgttacctctgctgc
aggaaaccccaggatagacaacgctggctgcaggccttcgccagggagagacagagggta
caggaggaccaggagatgggaatgaagatcagtgaaacgcagagaaaacaagcaatcttc
aatgcaagaagatccaaacaagggaaaatgaagaccataggctactctggctctgtcccg
ccccaccaccaccaccaacccctgcatccaattcaccagcgccatgttactgtgccaacc
agtgtgcctcagcagcaggtgttcacattggccgagcccaagcgaaagcccgcccacctg
tggtacaccttcacccgacatgccttgttcaggaagtga
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