Salmo trutta (river trout): 115151063
Help
Entry
115151063 CDS
T08542
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115151063
03015 mRNA surveillance pathway
115151063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115151063
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115151063
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115151063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Eap1
Motif
Other DBs
NCBI-GeneID:
115151063
NCBI-ProteinID:
XP_029550871
Ensembl:
ENSSTUG00000030430
UniProt:
A0A674BES1
LinkDB
All DBs
Position
16:55012024..55030349
Genome browser
AA seq
493 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGSLQIKDKLEENGTASTATTTAAAASASTPAKMEGGEGNK
TEEEDDKDDKAAQSLLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQG
VYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKFPQCL
CVSPTYELALQTGKVIEQMGKYYSEVKLVYAIRGNKLQRGTQLQEQVVIGTPGTMLDWCL
KFKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKQCQMLLFSATFEETVWNFAQ
RIVPDPNIIKLKREEETLDTIKQYYVLCNSKEEKFMALCNIYGAITIAQAMIFCHTRKTA
GWLAGELSREGHQVALLSGEMQVEQRAAVIDRFREGKEKVLVTTNVCARGIDVEQVSVVI
NFDLPVDRDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKFSMNVLNKIQDHFNKNIEKL
DTDDLDEIEKIAS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggactcctgggcccaggctgtggacgaacaagaagccgcggcggaatcgatt
ggtagcctgcaaatcaaagacaagcttgaggaaaatggcacagcaagcaccgcaacaaca
accgcagcagcagcaagtgcatcaacgcctgcaaagatggaaggaggcgagggaaacaaa
acggaggaggaagacgacaaagatgacaaggcggcacagtcgttgttgaataagttgata
cgcagtaatctagtgaacacaaccaatcaagtagaggtccttcagcgggatcctaactct
ccactctactctgtaaaatcatttgaggagctgcggcttaaacctcagctgcttcaggga
gtatacgccatgggcttcaaccgcccctccaaaatccaagagaacgctttacccttgatg
ctcgcagaacccccacagaacctgatagcccagtctcagtcagggacggggaagacggct
gctttcgtcctggccatgctcagtcacgtcgaccccaacaacaagtttcctcagtgtctg
tgcgtgtctcccacttatgagctggccctacagacagggaaggtcattgagcagatgggg
aagtactactctgaggtcaaactagtctatgccatcagaggaaacaaactgcagagaggc
acgcagctccaggagcaggtggtgattgggacgccaggcaccatgctggactggtgtctg
aagtttaaattcatcgaccccaagaagattaaagtgtttgtcctggatgaggctgatgtc
atgattgctacacagggacaccaggaccagagcatacgcattcaaaggatgctacccaaa
cagtgtcagatgctcctgttctctgccacgtttgaggagacggtgtggaactttgcccag
cgcatcgtcccagaccccaacatcatcaagctgaagagggaagaggagacgctggacacc
atcaagcagtactacgtcctctgtaacagcaaagaggagaagttcatggccctctgcaac
atctacggggccatcaccattgctcaggccatgatcttctgtcatacaaggaagactgcg
ggctggctggcaggtgagctgtcccgggagggccaccaggtggcgctgctcagtggggag
atgcaggtggagcagagagctgctgtcatcgaccgcttcagagaaggaaaggagaaggtc
ctggtcaccaccaacgtctgcgccagaggtattgatgtggagcaggtttccgtggtgata
aacttcgacctgccggtggacagagatggtaacccagacaatgagacgtacctgcaccgg
attggccgcacaggtcgttttgggaagaggggattggccatcaacatggtggacagcaaa
ttcagcatgaatgtcctcaacaagatccaggatcacttcaataagaacattgagaagctg
gacacagatgatctggatgagattgaaaaaattgcaagctga
DBGET
integrated database retrieval system
