Salmo trutta (river trout): 115151108
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Entry
115151108 CDS
T08542
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115151108
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
General mRNP proteins
115151108
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
115151108
NCBI-ProteinID:
XP_029550957
Ensembl:
ENSSTUG00000035109
UniProt:
A0A674C7Y0
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Position
16:complement(58405901..58454341)
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AA seq
539 aa
AA seq
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MADDFDIEAMLEAPYRKDEIKHSSPNGHKERSKKKKKSRSRSRDGKRSRSRDRKKSHDHK
RSRSHERKRSRSRERHRSRSRSRERSGRYRDHKTTFSGPKFNGGSRGKIGPPPVIKLSRR
RSRSRSPFKKEKSPVRQVFLGEMTQKSSIRQPIDNLTPEERDARTVFCMQLAARIRPRDL
EEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQ
VMAEKNRAAAMANNLQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSET
GRSKGYGFITFSDTECAKKALDQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERT
GIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAIAIGAMAAVSAAMNPAMNMNMNT
AMNLPSQPLATHCFQLSNMFNPQSEDNPDWDVDIQHDVIEECNKHGGVVHIYVDKNSTEG
NVYVKCPSIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSVTATQLLIPPARR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgacatagaagcaatgcttgaggctccatatcgaaaggatgagatc
aagcacagtagtccaaatgggcacaaggaacgcagcaagaagaaaaaaaagagcaggagc
cgaagcagagacgggaagagaagcagaagccgggatcgcaagaagagccatgaccacaag
cggagccgcagccacgagcgaaagcggagccgcagcagggagaggcaccggagccgctct
cggagcagagagcgcagcggccgttacagggaccacaagaccaccttctctgggccgaag
tttaacggtggttccagagggaagattggccccccacctgtcatcaagctaagccgaaga
cgttccagaagccgaagcccgttcaagaaagagaagagtcctgtgaggcaagtgttcctt
ggggagatgacgcaaaagagctcaatcaggcagccaatagataacctgactccagaggaa
agggacgctcgcacagtgttctgcatgcagctggcagccagaatccgaccacgagacctg
gaggagttcttctctgcagtgggaaaggtgagagatgtgcgcatgatctctgacagaaat
tcgaggaggtcgaaggggattgcttacatcgagtttgtggaggccaactcggtgccactg
gctataggattgtctggccagcgacttctgggggtgccaataattgttcaggcctcacag
gtaatggctgagaaaaacagggctgctgccatggccaacaacctgcagaagggcaacgct
ggcccgatgagactctacgtcggatccttacactttaacatcacagaggagatgctacga
ggaatatttgagccttttggaaagattgagagtattcagctcatgatggatagtgagacg
gggagatccaaaggatatggcttcatcactttctcggacacagagtgtgccaagaaggct
ttggatcagttgaacggctttgagctggctggccggccgatgaaggtgggccatgtgact
gagcgcacagacgcctccactgccagctccttcctggacagcgacgagctggagaggaca
ggcatcgacctgggcacaactgggcgcctgcagctcatggccagattggctgaaggcacg
ggactgcagattcccccagcagcacagcaagccctgcagatgagtggggccattgctatt
ggtgccatggccgctgtatcagctgccatgaatcctgctatgaacatgaacatgaataca
gctatgaacctaccctcacagccacttgctacacactgtttccagctgtctaacatgttc
aaccctcagtctgaagataacccagactgggatgttgacattcagcatgatgtcattgag
gaatgcaacaaacatggtggagttgtgcacatatacgttgacaagaattccactgaaggc
aacgtgtatgtgaaatgtccatccattcctgctgccatggctgcagtaaacgcattacat
ggtcgatattttgcaggtaaaatgatcacagcggcatacgtccctctcccaacatatcac
aaccttttccctgactctgtgacggcaacccagctcctgatccctcctgctcgccgatga
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