Salmo trutta (river trout): 115151422
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Entry
115151422 CDS
T08542
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04810
Regulation of actin cytoskeleton
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115151422 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115151422 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115151422 (cyfip1)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115151422 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
115151422 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
115151422
NCBI-ProteinID:
XP_029551200
Ensembl:
ENSSTUG00000046923
LinkDB
All DBs
Position
17:1162326..1248201
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPCSLMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGHDELLAD
IVNLCVDYYENRMFLTPNEKHMLLKVMGFGLYLMDGSNSNIYKMDAKKRINLNKVDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKNRWSCTSTGSSPQYNICEQMVQIREDHMRFI
SELARYSNSEVVTGSGRQEAHKTDHEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYSIEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSVLQDFAQLTLRDPLRQAIKKKKNVVQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTIMDMEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGGRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEGLMNINRLTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
IFGFYRHFVGPPHIKAMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVRTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAITREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIISLLGQQRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIHKFQVLNDEIYAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggtgaccctggaggatgctttgtccaatgtggaccttctggaggagctg
cctctcccagaccagcagccttgcatcgagcccctgccttgctccctcatgtaccagccc
aacttcaacaccaactttgaagaccgtaatgcctttgtgacggggatcgccagatatatc
gagcaggccaccgtccactctagcatgaatgagatgctggaggagggccaggagtatgct
gtgatgctgtacacatggaggagctgctctcgcgcgatcccacaggtgaagtgtaatgaa
cagcccaacagagtggagatctatgagaagacagtggaggtgctggagcctgaggtcacc
aagctcatgaactttatgtacttccagcgaacggctatagaccggttctgtggggaggtg
cgtcgtctctgccacgctgaaaggaggaaggactttgtctctgaggcctacctcctcacc
ttggggaagttcatcaacatgttcgctgtgctcgacgaactcaagaacatgaagtgtagc
gtcaagaacgaccactctgcctacaaacgagctgcccagttcctcaggaagatgtcagag
ccctcgtccatccaggagtctcagaatctctccatgtttctggccaaccacaacaagatc
actcagtctctgcagcagcagttggaggtgattaacggccatgatgagctgctggctgac
atagtcaacctgtgtgttgattactatgaaaacaggatgttcctgacccccaacgagaaa
cacatgctgctcaaggtgatggggtttggtctttacctgatggatggcagtaacagcaac
atctacaaaatggacgccaagaagaggatcaacctgaacaaggttgacaagttcttcaag
caactgcaggtggtgcctctgtttggtgacatgcagattgagctgtccaggtacatcaag
accagcgcacactttgaagagaacaagaaccggtggtcatgtacctcaacaggcagcagt
cctcagtataatatctgtgagcagatggtccagatcagggaagaccacatgaggttcatc
tctgagctggctcgctacagtaacagtgaggtggtgacaggctccggtcgtcaggaggcc
cacaagacagaccatgagtacaggaagctgtttgacctggctctgcaggggatgcagcta
ctgtcccagtggagcgctcacgtcatggaagtgtactcgtggaagctggttcatccaacg
gataagtactccaacaaggagtgtcctgacaacgcggaggagtatgaacgagctacacga
tacaactacagcatcgaggagaagtttgccctggtcgaggtgatggccatgataaagggt
ttgcaggttctgatgggtcgtatggagtctgtgttcaaccacgctatccgccacaccatc
tactcggtcctgcaggacttcgcccagctcaccctgagagacccgctacggcaggccatc
aagaagaagaagaacgtggtgcagagtgtcctgcaggccatcaggaagaccatctgtgat
tgggagacaggacgtgagccccacaatgatcctgccctgcgaggagagaaagaccccaag
ggaggctttgacatcaaggtcccccgccgtgccgtcggcccctccagcacacagttgtac
atggtccgtaccatgctggagtctctgatcgctgataagagtggatctaagaagactctc
cgcagcagtctggagggccccaccatcatggacatggagaagttccaccgagagtccttc
ttctatacccacctgctcaacttcagcgagaccctgcagcagtgctgtgacctgtcccag
ctgtggttcagagagttcttcctggagctgactatgggtgggaggatccagttccccatc
gagatgtccatgccctggatcctcacagaccacatcctggagaccaaggaggcctcaatg
atggagtatgtgctgtaccctctggacctctataatgacagtgctcactacgctctgacc
aagttcaagaagcaattcctctacgatgagattgaagccgaggtcaacctgtgttttgat
cagtttgtctacaagctggctgatcagatatttgcctactacaagattctagctggaagt
ctgctgctggacaagcgtctgagagcggactgtaagaaccagggagccaacatcccctgg
cccgcgtccaaccgctacgagaccctgctgaagcaacgccacgtccagctgctgggtcgt
tccatagacctgaaccgtctgatcacccagagagtgtctgctgctctctacaagtctctg
gagctggccatcaaccgcttcgagagcgaggacctcacatccatcgtggaactagaaggt
ctgatgaacatcaaccgtttgacccacaagctgctgtcgaagttcctgacgctggacagt
atggacgccatgttccgggaggccaatcacaatgtctccgccccctacggacgcatcaca
ctccacgtcttctgggaactcaactacgacttcctccccaactactgctacaacggatct
actaacaggtttgtccgcacggtcctgcccttctctcaggagttccagagggacaagccg
cccaacgcccagccccagtacctgtacgggtcaaaggctctgaacctggcgtacagcagt
atcttcggtttctacagacactttgttggtcctcctcacatcaaggccatgtgccgtctg
ctggggtaccagggcatcgctgtggtcatggaggagctgctgaaagtggtcaagagcctg
ctccaggggaccatcatgcagtatgttaggaccctgatggaggtgatgcctaagatctgt
cgtctccctcgccatgagtacggctccccgggtatcctggagttcttccaccaccagctg
aaggacatagtggagtacgccgaactgaagactgtctgctttcagaacctcagggaggtg
ggcaatgctctgctcttctgtctgctcagcgagcagagcctgtctcaggaggaggtgtgt
gacctgctacatgccgcaccattccagaacattcttcccagggtccatgtcaaggagggt
gagcgtcttgatgccaagatgaaacgtctggaggctaaatacacagccctgcacctggtt
cccctaatagaacgcctgggaaccccacagcaaatagccattacccgtgaaggcgacctg
ctgaccaaagagcgtctctgctgtggcctgtccatgttcgaggtcatcctcacgcgcgtc
cgcggtttcctggacgaccccatctggcgcggcccgttgcccagcaacggcgtgatgcac
gtggacgagtgcgtggagttccaccggctgtggagcgccatgcagtttgtttactgcatc
cctgtcggagcacacgagttcaccgtggagcagtgtttcggggacggtctccactgggct
ggatgtatgatcatctccctactgggtcaacagagacgcttcgacatcctggacttcagc
tatcacctgctgaaggtgcagaaacacgatggaaaagatgagataatcaagagtgtgcct
cttaaaaagatggtggacagaatccacaagttccaggttctcaacgatgagatctacgcc
attctgaacaagtacctgaagtcaggtgatggggaaaatatgcctgtggagcacgtccgg
tgtttccagcctcctatccaccaatccctggccagcaactga
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