Salmo trutta (river trout): 115151648
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Entry
115151648 CDS
T08542
Name
(RefSeq) survival motor neuron protein 1-like isoform X1
KO
K13129
survival motor neuron protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115151648
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
115151648
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Gene cluster
GFIT
Motif
Pfam:
SMN_Tudor
SMN_YG-box
Tudor_3
Motif
Other DBs
NCBI-GeneID:
115151648
NCBI-ProteinID:
XP_029551620
Ensembl:
ENSSTUG00000005546
LinkDB
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Position
17:14145834..14152635
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AA seq
423 aa
AA seq
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MAECPASIVLRSEGVESSNIEKESGEKLLPNLQKLFESELSESCVPSLETVDPRANSKSD
EKESDEKLADNPQKFSESCVPCKGPFDPKANLKWEVGSHCKAVWSQDGRVYPATLVWLEG
ERCKVKFDNYGNEEEMDLSAMLPEAADQPRKEKRSDEKESDEKLADNPQKLMELKLSESD
VPNKGPVHPKANSKVWMLGSRCRAVYSEDGLVYPAVLVWMRGERCRVKFEGYGNEEELEL
SSLLLPDDLGRHCGRATAKAVEGFRSTSNNSSDWKKDREWRTPQQEGREEPSSPRPLEFP
PGKGYNLGNEQGDKKKPSSQKEEPNGRIREPNDHPFPFFPPVPPPNGSLDFLSLLPPPPP
PPCVWPPRAGLVDAGDGLDSAVTDLSSMLLSWYLCGYHTGCYMAMQQTAASRKRAHKEKR
AEE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtccagcaagtattgtattgcgaagtgaaggagtcgagagctcaaacatc
gaaaaagagagtggggagaagcttctccccaatctacagaaactgtttgagtcagaactg
tccgaatcttgtgtgccaagtctggaaaccgttgacccaagggcaaactcaaagagcgat
gaaaaggagagtgatgagaagcttgcagacaatccacagaaattctcagaatcttgtgtg
ccatgtaagggaccgtttgacccaaaggcaaacttaaagtgggaggtagggtcccactgc
aaggctgtgtggtcacaggatgggcgggtttatcctgccaccctggtctggttggaggga
gagcgctgcaaggtgaagtttgacaactatggaaacgaggaagagatggacctgagcgcc
atgctacctgaagctgctgaccagccccggaaggagaaacggagcgatgaaaaggagagc
gatgagaagcttgcagacaatccacagaaactgatggaattgaaactctcagaatctgat
gtgccaaataagggaccggttcacccaaaggcaaactcaaaagtgtggatgctgggttcc
cggtgccgtgctgtgtactcagaggatggactggtctacccagcggtactggtgtggatg
agaggcgaacgctgccgggtgaagtttgaaggatacgggaacgaggaggagctggagctg
agctccctgctattgccagatgacctgggacgacactgtggaagagctactgccaaggct
gtggaagggttcaggtccactagtaacaacagctcagactggaagaaggatagagagtgg
aggacacctcaacaagagggacgagaggagccttcctcacctcggccacttgagtttcct
ccaggaaaaggctataaccttggcaatgagcagggggataagaagaagccaagtagtcag
aaagaggaaccaaatggccggattcgggaaccaaatgatcacccctttcctttttttcct
ccagtgccaccgcccaatgggtctttggacttcctgtcactcctgcctcctcctccacct
ccaccgtgtgtatggcccccccgagcagggctggtggatgctggcgatgggctagactcg
gccgttacagacttatccagcatgctgctctcctggtacctgtgtggctaccacactggc
tgctacatggcaatgcagcagacagcggcaagtcgcaagagggctcataaagagaaacgg
gcagaggaatag
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