Salmo trutta (river trout): 115151664
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Entry
115151664 CDS
T08542
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
stru
Salmo trutta (river trout)
Pathway
stru03010
Ribosome
stru04120
Ubiquitin mediated proteolysis
stru04137
Mitophagy - animal
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
115151664
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115151664
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115151664
04137 Mitophagy - animal
115151664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
stru03011
]
115151664
04121 Ubiquitin system [BR:
stru04121
]
115151664
Ribosome [BR:
stru03011
]
Ribosomal proteins
Eukaryotes
Large subunit
115151664
Archaea
115151664
Ubiquitin system [BR:
stru04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
115151664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
115151664
NCBI-ProteinID:
XP_029551653
Ensembl:
ENSSTUG00000006141
LinkDB
All DBs
Position
17:14863299..14864921
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatattcgtgaagacgttgacggggaaaacaatcacccttgaggttgagcccagc
gatactattgaaaatgtcaaggccaagatccaggataaggaaggcattcctcctgatcag
cagcgtctgatcttcgctggcaaacaacttgaggatggtcgcaccttgtcagactataac
atccagaaagagtccacccttcatcttgtgctgcgtcttcgtggaggcattatcgagcca
tctctgagacagctggcccagaagtacaactgtgacaaaatgatctgccgcaagtgctac
gctcgcctccatcctcgtgctgtcaactgccgcaagaagaagtgtggacacaccaacaac
ctgcgccccaagaagaagctgaagtaa
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