Salmo trutta (river trout): 115151695
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Entry
115151695 CDS
T08542
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
stru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115151695
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115151695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115151695
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115151695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
115151695
NCBI-ProteinID:
XP_029551704
Ensembl:
ENSSTUG00000008429
LinkDB
All DBs
Position
17:15556260..15597443
Genome browser
AA seq
2350 aa
AA seq
DB search
MGIGTQLLLLLWKNITYRRRNKVQLIIELVWPLFLFLILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWVQGIICNINNPCFHNPTQGETPGRVGNFDNSILSRLLVDSQTILSYSGNQT
AFSGFQDLLDTIRRLGERPGAWPNLPVGEYLRANQTFSNFLLTNGSLSPSALDQLFRARL
NFQVVSLAGTGVMLKDIVCNGTVLSQFLTVDQEDSMAELQSQLCAIPADTLQQAEQLFLS
QLDFSKFFTRDRLRANAGDLRVISQAVTSVSKELAVLMDDLSSLASFRELNSELRLLSPE
NRSSLPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDNDMDKDNVTT
PYCKSLIQSLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVLDVMKEVNKTFQDLQILQEL
NGAWMEVAPGIKTYMESSVEIQLLQDLLRRPEVAVLVNLQLENTSWTAKRIARFLSTPNE
PRKEGAPPTWLDVYSDLNNTITTLAQVTQCFSLNKLEGAATEGQMIDRALELLEEREFWA
GIVFLLPNTSLPGLPPHVTYKIRMDIDDVARTNKIKDRFWDPGPAADPFSDMRYIWGGFV
YVQDLVERAVARVLSGVEQSTGLYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAM
IIKGVVYEKEARLKETMRIMGLGTGQLWVSWFISSLVPFLVSAGLLIALLKWGDILPYSN
PAVVFFFLTAFATATIMQCFLISTFFSRANLAAACGGLIYFALYLPYVLCVAWRDHLTTT
HRVLASLFSPVAFGFGCEYFSQYEEQGVGIQWFNLHSSPMEGDTYNFTTSIIMLHIDACI
YALATWYIEAVFPGEYGVPRPWNFVFSLNYWGGIPLEAGMPIPPAPRGQGGDCIEADPSH
LILGVAIRNLVKIYKQGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTA
GTVYIKGMDIRTDMDIIRKTLGVCPQHNVLFDILTVEEHVWFYGRLKGLSGDEVRKELDT
LLEDVGLLHKRHEQTRNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLL
LKYRKDRTIILSTHYMDEADLLGDRIAIISQGKLCCCGSPLFLKAKLGTGYYLTVVKKEG
LDTRTPSSASATKLPPATKDSDSSMSDDTGLGSDVSGSDLAALLTLAQRHIPGAQLVEDV
GREAVINLPQKSAEDSSLAIFLTELDRRQADLGITSYGLSDTTLEEIFLRVAEETGVDVD
PEDSPGQADTPHGQGQGQGLSGEPSEDPGRKRLRKQEPQETDLLSGDGHGGVPLTGWGLT
WQQLRALFIKRWLYALRSRRGFFAQIVLPAVFVLIALLFSLIVPPFGKYPSLQLQPWMYG
EQYTFFSNDAPGDPAIQNLLDALLDRPGFGTKCMENSTDPQCLQEEEGMFMRPQILYSTW
QLFNRGNWTADKPSPDCECSSEEVRRMLPDCPEGAGGIPPPQVQRLTGDILQNMTGRNIS
DYLVKTYPQIMKKSLTSATKKWINEFRYGGFSLGGRGTQAVPQAYQMEDSVMSIRSRYKV
AQNSSLNQLLGRLPEFLGGLNSQNNVKVWYNNKGWHAMASFVNVMNNGLLRASLPPGPER
MKYGITAYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFSMSFVPASFVLFLIEERVSKA
KHLQFVSGVRPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSETNLPALVLLLLL
YGWSITPLMYPASFLFSVPSTAYVVLTSINLFIGINGSIATFVLELFVDQHLNDINKILK
KVFLIFPHFCLGRGLIDMAKNQAMSDAFQRLGAKQTLDPLEWDFVGKNLFAMAVEGVVFF
LFTILLQYKFFVNCRPCSEPELPPLGPEDEDIARERERVKSGKAQADILTMMDLSKVYKA
GKKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTAITYGEAFLSHHSVLTEMER
VHQLMGYCPQFDAICDLLTGREHLEFYARLRGVPEESVAKVAQWGVKKLGLTQYAEREAG
GYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVIKEGRAVVLTSHS
MEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIVLRLSGTKPPEDPCPVDTYIKG
SFPGIELKERHQNVLQYQLPSHSCSLARVFDVLSNNHEELGIADYSVSQTTLDQVFVNFA
KEQSDDDLLREVTVNGGTPAPQPRRAAQPTQPGQTAKAAQTTKPPQSVKSSDCRPRETKP
NGVTDSGMAMTSRLQEKPQSSRGESRRELSSRRSSKESSANGSKGTRETSGNKDPTSLFL
VGSSTQDSSV
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgggactcagctcttgctcctgctctggaagaacatcacttaccgcaggagg
aacaaggtccagttgattatcgagctggtctggcctctgttcctcttcctcatcctcatc
tcagtgcgtcactctcatcctccctacaaacagagccaatgtcatttccccaacaaggca
cttccctcagcaggcaccctgccatgggttcagggaatcatctgcaacatcaacaacccc
tgcttccacaaccccactcagggggagaccccagggcgggtgggcaactttgacaactcc
atactctctcgactgttagtggactcccagacaatcctatcctacagtggcaaccagaca
gccttctctggctttcaggaccttctagatactatacggagacttggagagaggccaggc
gcctggccaaatcttcctgtgggagaatacctgcgagccaatcagaccttctccaacttt
cttctgaccaatggcagcctgtctccctctgccctagaccagctgttcagggctcgcctg
aactttcaggtggtgtctctggcaggcactggggtgatgctgaaggacattgtgtgcaat
ggtactgtgctgagccagttcctcactgtagatcaagaggattctatggcggagctgcag
agccagctctgtgccatcccagccgacaccctgcagcaagcagagcagctcttcctctcc
cagctggacttcagcaagttcttcacgagagacagactgagggccaacgccggtgacctc
cgggtcatcagtcaagcggtcacctccgtgtccaaggagttggcagtactcatggatgac
ctgtcctctctcgctagctttagggagttgaactcggagctgcgtctgctctcgccagag
aaccgttcaagcctgccgcgggagagcttcagggccttctccaggattatgtgtggccac
cctgaggtgggcggcgagaggatcccttcactcaactggtacgaggacaacgacatcaag
tccttcctgggcaagaacggcaccgaggacaacgacatggacaaggacaacgtcaccacc
ccgtactgtaaaagcttgatccagagcctggagtccaacccactgtctcgcattgtgtgg
cgagggatcaagcccctgttcattggcaaactgctgtacacaccagacacccctgccgta
ctcgacgtcatgaaagaggtgaacaagaccttccaggacctgcagatcctacaggagctg
aatggtgcctggatggaggtggcacctggtatcaagacctacatggagagtagtgtggag
atacagctgctgcaggatctgctgaggcggccagaggtggccgtgttggttaatttgcag
ctggagaacacttcctggacagccaagcgcattgcccgcttcctgtccacgcccaatgaa
cccaggaaagaaggagcgccccctacctggctggacgtgtactccgacctgaacaacacc
atcaccactctggctcaagtcacccagtgtttctccctgaacaagctggagggtgctgcc
acagagggacagatgattgacagggccttggagctgttggaggagagagagttctgggct
ggcatagtgttcctccttcccaacacgtccttacccggtctgccccctcatgtcacctac
aagatccgcatggacatcgacgatgtcgcacgcaccaacaagatcaaggacaggttctgg
gacccgggcccagcagctgaccccttcagtgacatgcgctacatctgggggggctttgtg
tatgtacaggacctggtggagagagctgtggcccgtgtgctgagcggtgtggagcagtcc
actggcctctacatccagcagatgccttacccctgctacgtagatgacgtttttctacgc
gtgctgaaccgctcgctgcccctgttcatgacgctggcgtggatctactcggtggccatg
atcatcaagggtgtggtgtacgagaaggaggcacggctcaaggagaccatgaggatcatg
gggcttggtacaggccagctgtgggtcagctggttcatcagcagcctggtgcccttcctg
gtcagcgccggcctcctcattgctctgctcaagtggggggacatcctgccctacagcaac
ccggctgtggtgttcttcttcctgacggccttcgctacggccaccatcatgcagtgtttc
ctcatcagcaccttcttctcccgggccaacctggcagctgcctgcggaggcctcatctac
ttcgccctctacctgccctatgtgctgtgtgtggcctggagagaccacctcaccaccaca
caccgtgtcctagcaagcctgttttctcctgtggcctttggctttggctgtgagtatttc
tcccagtacgaggaacaaggagtgggcatccagtggttcaacctgcactccagccccatg
gagggagacacctacaatttcaccacttccataatcatgctgcatattgatgcatgtatc
tacgctctggccacctggtacattgaagctgttttcccaggtgaatatggggtccccagg
ccatggaacttcgtgttcagtttgaactattggggaggaattcctctagaggccggcatg
cccatccctccggctcccagaggacagggaggagattgcatcgaagccgacccctctcac
ctcatacttggtgtggccatccgcaacctggtaaaaatctacaagcaaggtgccaagctg
gcagtcaaccacctcaatctcaagttctatgaagggcagatcacctccttcctggggcac
aacggtgctggcaaaacaaccaccatgtctatcctgacgggtctgtttccccccacggct
gggactgtgtacattaagggcatggacatccgcactgacatggacatcatcaggaagacc
ctgggagtgtgtcctcagcacaatgtcctttttgacattctgaccgtagaggagcatgtg
tggttctatggtcgtctgaagggcctatcaggcgatgaagtgaggaaggagttggacact
ctcctggaggatgtgggcctgctgcacaaacgccacgaacagaccaggaacctgtctggt
ggtatgcagaggaagctgtcggtggccatagcatttgtggggggttcgaaggtggtggtc
ctggatgagcccacagctggggtggacccctactcccgtcgaggcatttgggacctgctg
ctcaagtaccgcaaagatcgcaccatcatcctctccacccactacatggatgaggctgac
cttctcggagaccgcatagccatcatctcccaggggaagctgtgctgctgcggctcccct
ctcttcctcaaggccaagctggggacgggctactacctcaccgtcgtcaagaaggaggga
ctggatactcgaacccccagtagtgccagcgctaccaaactgccccctgccacaaaggac
agcgactcctccatgagtgatgacacaggtctgggcagtgatgttagcggctcagacctg
gctgccctgttgaccctggcgcagcgtcacatccccggggcgcagctggtggaggacgtg
gggcgtgaggcggtcatcaacctgccccagaagtcggcagaggacagcagtctggccatc
ttcctcacagagcttgacaggaggcaggctgatctgggcatcaccagctacggcctgtct
gacaccaccctggaggagatctttctgagagtggctgaggagacaggggtggacgtggac
ccagaggacagcccaggacaagccgacacaccccatgggcagggtcaaggacagggcttg
tctggagagccatctgaggatccaggaagaaaacggcttcgcaagcaagagccccaggag
acagacctgctgagtggggatggccatggcggtgtccctctgaccggttggggtttgacg
tggcagcagctgcgtgcgctcttcatcaagaggtggctgtatgccctccgcagtcgcagg
ggcttcttcgctcagatcgtgctgcctgctgtgtttgtgttgatcgctctccttttcagc
ctcatcgtccctccgttcggaaagtacccctcgctccagctacagccctggatgtacggg
gaacagtacaccttcttcagcaacgatgcccctggggatcctgccattcagaatctgctg
gatgcccttctggaccggcctggatttggaaccaagtgcatggaaaacagcacggatcct
cagtgtttgcaggaggaggaaggcatgttcatgaggccccagattctctactccacctgg
cagctcttcaacaggggcaactggactgcagacaagccatctcctgactgtgagtgcagc
tctgaggaggtccgcaggatgctaccagactgccccgaaggagccggaggcatcccccct
ccacaggtccagagattgacaggggatatcctgcagaatatgaccggccgcaatatctcg
gactacctggtcaagacttaccctcagataatgaagaaaagcctaacttcagccactaag
aagtggatcaatgaattcagatatgggggcttctctctggggggcagaggtactcaggct
gtcccacaggcctaccaaatggaggactcagtcatgtctatacggtcacgttacaaagtg
gcacagaatagctcattaaatcagctcctcggtcgcctaccagagtttctgggtggactg
aatagtcagaacaatgttaaggtgtggtataacaacaagggttggcacgccatggcatcg
tttgtcaatgtcatgaacaatggcctgctccgtgccagcctgcccccagggccagagcga
atgaagtatggcataaccgcctacaaccaccctctcaacctcaccaaggaacagctcact
gaaattgccatgatgaccacctcagtagatgttctggtgtccatctgtgtgatcttctcc
atgtcctttgtgccggccagctttgtgctgtttctcatcgaggagagggtcagcaaagcc
aagcaccttcagtttgtcagcggagtccggcccattctctactggctggctaacttcacc
tgggacatgctgaactatacagtcccggccactatggtggtcctcatcttcatttgcttc
cagcaacagtcctatgtgtctgaaacaaacctccctgctctggtcctgttgctcttgctt
tatggctggtctatcactcctctcatgtatccagcctccttcctgttcagtgtccccagc
actgcctatgttgtcctcacctcaatcaacctcttcatcggcatcaacggcagcatagcc
acctttgtcttggagctgttcgtagatcagcacttgaacgatatcaacaagatcctaaag
aaagtcttcctgatcttcccccacttctgtctgggtcgaggcctcatcgatatggctaaa
aaccaggctatgtcggacgctttccagagactgggcgcaaagcagaccctggaccccctg
gaatgggactttgtggggaagaacttgtttgccatggctgtggagggtgtcgtgttcttt
ctcttcacaatactgctacagtacaagttctttgtcaactgcaggccctgctctgagcct
gagttgccccctcttggcccggaggacgaggacatcgccagggagagagagagagtgaag
agtgggaaagcccaagccgatatactcaccatgatggacctgagtaaggtgtacaaagct
ggcaagaagccagcagtagatcgtctgtgtctgggtattcctcgtggagagtgctttggg
ctgctgggggtaaatggggctgggaagacctccacgtttcgcatgctgactggagacact
gcgatcacctatggagaagcatttctcagtcatcacagtgtgctgacggagatggagcgg
gtccaccagctgatgggctactgcccccagtttgatgccatctgcgacctgctgactggc
agggagcacctggagttctacgctaggctccgaggggtgccagaggagtctgtggccaag
gtggctcaatggggagtgaagaagctggggctgacccagtacgcagagcgagaggccgga
ggctacagcggaggcaacaaacgcaaactctccactgctatctccctgatcggagctccg
cctgttatattcctggatgagcccaccactggcatggaccccaaggccaagagattcctg
tggaactgcatcctgagcgtcatcaaggagggaagggccgttgttctcacctcccacagt
atggaggaatgcgaagctctctgcacacgaatggccatcatggtgaacggaaggttccag
tgtctgggctccgttcagcaccttaagaacaggttcggggacggctacacaatcgtcctg
cgcctgtcggggaccaagcctcccgaggatccgtgcccggtggacacctacattaagggc
tccttcccaggcatcgagctaaaggagaggcaccagaacgtgctgcagtaccagctgccc
tcccactcctgctccttggcgcgggtcttcgatgtgctttccaacaaccacgaggagctg
ggcatcgccgactactcagtgtcacagaccaccctggaccaggtgtttgtcaactttgcc
aaggagcagagcgatgacgacctgctgagggaagtgacagtcaacggtgggacaccagca
cctcaacccagaagagcggcccagcccacccaaccagggcagacagccaaagcagctcaa
acaaccaagcctccccagtctgtcaagtcctcagactgcagacccagagagaccaagcca
aacggggtcacggacagtgggatggcgatgacaagcaggctacaggagaagccccagtcg
agcaggggagagagcaggagagagttgagtagtcggaggtcaagcaaggaatcgtccgcc
aacggatccaagggcacaagggagacttcaggcaataaggatccaaccagtctgttccta
gtgggtagcagcacacaagacagcagtgtgtaa
DBGET
integrated database retrieval system
