Salmo trutta (river trout): 115151789
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Entry
115151789 CDS
T08542
Symbol
sbno2b
Name
(RefSeq) strawberry notch homolog 2b isoform X1
KO
K26273
protein strawberry notch
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115151789 (sbno2b)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115151789 (sbno2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
115151789
NCBI-ProteinID:
XP_029551877
LinkDB
All DBs
Position
17:complement(18402196..18505050)
Genome browser
AA seq
1652 aa
AA seq
DB search
MPSLPSPSPAMDGENYLHPEGPQLDSSIFEVASSNMESYLYPSGSWGSFSQQSGGYSAHC
PMQSGNQQYHLNAPMPDMHMDMFSHSGFHDDFLNLPRNGDFPQDLSCIDDLSNSLFSSPA
DSLSEYADAQAFIPTDNLAHVPTIWDINTPAQSQLELNVNRFQGLNSLEDISAIISTPPL
GGYQAQRNQTPAEEEAEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSVP
PPDITYTLSIPDSTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRT
VAGIILENYLKGRKKALWFSVSNDLKYDAERDLKDIDAPTIPVHALNKIKYGDTATSEGV
LFATYSALIGESQAGGQHRTRLKQILDWCKTGFDGVIVFDECHKAKNATSTKMGKAVLDL
QHNLPLARVVYASATGASEPKNMIYMSRLGIWGEGTPFKTFDDFLHAIEKRGVGAMEIVA
MDMKVSGMYIARQLSFSGVSFRIEEIGLDDDFKLVYNKAAKLWAEALAVFMRAADELCLV
SRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAKKELKAGKCIVIGLQSTGEARTREVLD
ENDGHLDRFVSAAEGVFKALVQKHFPSEKQRREKARGNKRKRKPRGRQPKFPKHTMVHLG
GVINISDDSSTDTDGMDTDSNSSPDSLMDNNDDVIFVQHTSCHTASIEKMKQSLLNKIAD
LGKELPLNTLDELIDQFGGPEMVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKE
KDRFMCGEKMVAIISEAASSGISLQADKRVKNQRRRVHITLELPWSADRAIQQFGRTHRS
NQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTK
ALDKITKAILGHIESKVSPPKGYPGGDALFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSI
TKFLNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQET
FMTVGNPQDGQVVLYKISVDRGMPWEEAYEKVQNLNSPDEGFYLSHKLRGNHPCVLLAEQ
GRGRNFIVYKPNIGKQAHPESLDNLQLRYHKVTPDQAKDSWESQFNFSFGKCSHANWNGK
CKKIEEGQECLQGMRLRQYHMLCGALLRVWKYVADVVSDITCSSILQIVRLKTKNSNKQV
GIKIPENCVARVRQELLKMDEEVKRRRKEKEQQRAQEQRLAEERQLQNQHLLAKLYSQRQ
TLNHSFKNQNLSQSLSQGLKTQRLSLAQANPLQVRPLLQPKPSQLKPQLGPVNQLPSMAS
PTSHFSNFPHHFPSLPLLQPDPSSSSKPPRTGEEVLDLTVSPSPSPDSKEKGLVLDCLTR
DGFGLDSLILLSELAAQNTAHKLQQPLQPLPPLTKPQQLQSPQQIQPQLQSPQQIQTQLQ
SPQQIQTQLQSPQQIQPQLQSPQQIQPQLQSPQQIQPQLQSPQQIQPQLQSPQQIQTQLQ
SPQQIQTQLQSPQQIQTQLQSPQQIQTQQRLDSPTLINSDHQDYYDILKLLEDPDHLPYS
LSSQTTTNPSSSSNTVAQVSSGLFSSPSTPPSSSLFSSSVLAPSEQQPLPLANGHCSTDA
LINVREVLDNMLRTSADRQTVIHYRLPEWDSV
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctcccatcaccctcaccggccatggacggggagaactacctgcacccagag
gggccacagctggacagcagcattttcgaagttgcctcttccaatatggagagttatctg
tatccctctggttcctggggatcattttcacagcagtctggaggctacagcgcacactgc
cctatgcaatctggaaaccagcaataccacttgaatgcccctatgcccgatatgcacatg
gacatgttcagccattcagggttccatgacgatttcctcaacctccccaggaacggagac
ttccctcaggacctgtcctgcatcgatgacctctccaactctctgttctcctctccggcc
gactcgctgtcagagtacgccgatgcccaggccttcatccccacagataacctggcccac
gtgcccacgatatgggacataaacacaccagcacagagccagctggagctgaatgtcaac
aggtttcagggtttgaacagtttggaggatatctctgccattatcagcaccccacctttg
ggaggataccaggctcagagaaaccagactccggcagaagaggaggcagaggaggaggag
gaagagacagaggagctgggacatgtagacacctacgctgactacaaaccatccaaatcc
accatagggatctcccacccagacatagtggtggagaccaacacgctgtccagcgtccct
ccacctgacatcacctacactctgtccattcctgactccaccatcaactgtggcctgctc
tctgccctgcagctagaggccatcatctacgcatgccagcaacacgaggtaattctgcag
aacaaccagagagcaggcttcctaataggagacggtgccggagtaggtaagggccgcacg
gtggccggcatcatcctggagaattacctaaagggaaggaagaaagcgctatggttcagt
gtatccaatgacctgaaatacgacgcagagagagatctgaaagacatagatgctcccacc
attcctgtgcatgccttaaacaagataaagtatggagacacagctacctcagaaggagtc
ctgtttgcgacatactctgcactgattggggagagccaagcaggggggcagcaccgcacc
agactcaagcagatcctggactggtgcaagaccggctttgatggagttattgtgtttgat
gaatgccacaaggccaagaatgctacgtccaccaagatgggcaaggccgtgctggacctg
cagcacaacctgccactggccagggtggtttacgccagtgccacaggtgcctctgagcca
aagaacatgatctatatgagccgcctggggatctggggcgagggcacgcccttcaagacc
tttgacgacttcctgcacgccatcgagaagaggggtgtaggcgccatggagattgttgcc
atggacatgaaggtgagtgggatgtacatcgcccggcagctgagcttctcaggggtgtcc
ttccgcattgaggagatcggcctggatgacgacttcaaactggtctacaacaaagctgcc
aaactgtgggcggaggcgctggccgtgttcatgcgtgcagcggacgagctgtgtctggtc
agcaggaagtccctgtggggtcagttctggtcgtctcaccagcgcttcttcaaatacctc
tgcatcgccgccaaggttcgctgcctggtggagctggccaagaaagaactgaaagctggc
aagtgcatcgtgattggtctacagtccacaggagaggcccgaaccagagaggtcctggat
gagaacgatgggcacctggacagattcgtatctgcagcagagggtgtgttcaaagctctg
gtacagaaacactttccctcagagaagcagaggagagagaaggcgcgtggaaacaagaga
aaacgtaagcccaggggccggcagcccaaattcccaaagcacaccatggtgcatctgggg
ggcgtgatcaacatcagtgacgacagcagcacggacacggacggcatggacaccgactcc
aactcctcgccagactccctgatggacaataacgatgacgtcatcttcgtccagcacacc
agctgtcacacagccagtatagagaagatgaagcagagcctcctgaacaagatcgctgac
ctgggaaaggaactacctctgaacactctggacgagctcattgaccagtttggaggacca
gagatggtatcggagatgacgggtcgtaagggtcgcgtggtgcggcgtcctgatggaagc
gtgcgctacgagtcgcgtgcagagcagagccataccatagaccacatcaacctcaaggag
aaggaccgcttcatgtgtggagagaagatggtggccatcatctcggaggcagccagctcg
ggcatctccctgcaggcagacaagcgggtgaagaaccagcgtcggagggtccacataacc
ctagagctgccctggagtgcagacagagccatccagcagtttggtcgtacccatcgctct
aaccaggtgacggctccagagtacatcttcctcatctctgagctggccggggaaagacgc
ttcgcctccattgtggccaagagactggagagcctgggtgcattgacccacggtgacagg
agagccacagagtccagagacctgagcaaatacaactttgaaaacaagtacggtaccaag
gctctggataagatcaccaaagccatcctgggccacatcgagagcaaggtgtcccctccc
aaaggttaccccgggggtgatgctctgttcttcagagacatgaagcatggcatgatggac
gtgggtatcttctgcaaggagccacggtttggtctcagcactgagaaagactgcagcatc
accaagttcctcaacaggatcctgggcctggaggtccacaagcagaactctctgttccag
tacttcaccgacaactttgactacctgatcgagaaggacaagaaggagggcaaatacgac
atgggaatcctagatctggccccaggtaatgatgaaatctacgaggagaagcaagagacc
ttcatgacagtgggaaacccccaggacggacaggtcgtgctctacaagatcagcgtggac
agaggtatgccctgggaggaggcctatgagaaggtccagaacctcaacagtcctgacgag
ggcttctacctctcccacaagttgcgggggaaccacccgtgtgtgctgctggcggagcag
ggtcgagggaggaacttcatcgtctacaagcccaacatcggcaagcaggcccacccagag
agcctggataacctgcagctacgctaccacaaggtgactccagaccaagccaaagacagc
tgggagagccagttcaacttctcctttgggaaatgtagccatgctaactggaacgggaag
tgtaagaagattgaggagggtcaggagtgtctgcagggaatgcgtctgcgccagtaccac
atgctgtgtggtgcgctactgcgcgtctggaagtatgtggccgacgtggtctctgacatc
acctgctccagcatccttcagatcgtacgcctcaaaaccaaaaatagtaacaagcaagtc
ggtatcaagatcccagagaactgtgtggcccgagtgcggcaggaacttctcaaaatggac
gaggaggtgaagagaaggcgcaaggagaaggagcagcagcgcgcccaggagcagcggcta
gccgaggagcggcagcttcagaaccaacatctgctggccaagctttacagccagagacag
accctgaaccacagcttcaagaaccagaacttgtcgcagagcctcagccagggcctcaag
acccagcgcctgagcctggcccaggccaatcctctacaggtcaggcctctactccagccc
aaaccttcacagctcaaaccccagctcggtccagtcaaccagctccccagcatggccagc
cccacctcccacttctccaatttcccccaccacttcccctccctgcccctcctgcagccc
gacccctcctcctcctccaagccccctcggaccggggaggaggtcttagacctgacggtg
agcccctctccctccccagacagcaaagagaaaggcctggtcctcgactgcctgaccaga
gacggctttggcctggactctctgatattgctgagcgagctcgccgcccagaacactgca
cacaaactgcagcaacctttacagccactgccaccactgacaaagccacagcagctacag
tcgccacagcagatacaaccacagctacaatcgccacagcagatacaaacacagctacag
tcgccacagcagatacaaacacagctacagtcgccacagcagatacaaccacagctacag
tcgccacagcagatacaaccacagctacagtcgccacagcagatacaaccacagctacag
tcgccacagcagatacaaccacagctacagtcgccacagcagatacaaacacagctacag
tcgccacagcagatacaaacacagctacagtcgccacagcagatacaaacacagctacag
tcgccacagcagatacaaacacagcaacggttggacagtccgactctaatcaacagcgac
caccaggactactatgacatcctcaaactgctggaagatccagaccatctgccttactct
ctgtctagccagacaactactaacccctcctcttcctccaacacagtggctcaagtctcg
tccggcctcttctcttccccctctacccccccctcctcctctcttttctcttcttcggtc
ctggccccctcagaacagcagccactccctctggccaacggccactgcagcacggacgcc
ctcatcaatgtgcgcgaagtgctggacaacatgctgcggaccagcgcagaccggcagacg
gttatccattaccggctgcctgaatgggactctgtgtaa
DBGET
integrated database retrieval system
