Salmo trutta (river trout): 115151831
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Entry
115151831 CDS
T08542
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
stru
Salmo trutta (river trout)
Pathway
stru04150
mTOR signaling pathway
stru04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115151831
04150 mTOR signaling pathway
115151831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115151831
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115151831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
SGL
EGF_LRP2
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
115151831
NCBI-ProteinID:
XP_029551952
Ensembl:
ENSSTUG00000004468
LinkDB
All DBs
Position
17:complement(20458915..20545096)
Genome browser
AA seq
1624 aa
AA seq
DB search
MELKLRAIAMDVFLVELLFYSTLLSVVNGSPLLLFANRRDVRLVDVEMGRPESAVVVSDL
EDAAAVDFLYSEGLIFWTDVSEEAIKQTYYNQSTDSLKEALGTRQTVVVSGLDSPDGLAC
DWLGRKLYWTDSETNRIEVANLDGTSRKVLFWLDLDQPRAIALNPAHRYMYWTDWGEEPR
IERAGMDGSNRKIIVEVDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSSRETVVEG
TLTHPFALTLSDETLYWTDWQTRSIHACNKHTGDKRREILSGIYSPMDIQVLGSDRQPDI
HTPCSDSNGGCSHLCLLSPMQPFYSCACPTGVKLKEDGKTCRPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVDDIRHAIAIDYDPVDGYVYWTDDEVKAIRRSRIDGTEAQTLVTTEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRRILISENLDEPRAIVLDPVNGYMYW
TDWGEKPKIERANLDGMERLVLLNTSLGWPNGLAIDYEAGKLYWGDAKTDKIEVIDVDGS
NRMTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKTNAIREIIIDQLPDLMGLKATR
VTEVSGTNGCVEDNGGCSHLCFHRPQGLRCDCPMGLELLNDMRTCVVPEAFLLFTNRADI
RSISLGTNSNDVAIPLTGVKEASALDFDVSENRIYWTDVSTKTISRAFMNGSSVEHVIEF
GLDYPEGMAVDWMGRNVYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLALNPANGYM
YWTEWGGKPRIARAHMDGSNIMTLVDKVGRANGLTIDYIDQRLYWTDLDTCMIESTNMQG
LQREIVADDLPHPFGLTQYRDYIYWTDWNLRSIERADKRSGLNRTMVQGHLEYVMDILVF
HSSRQDGANDCSQNNGNCAHLCLASPAGSQCRCASHYILDSNSRNCSSPSSFLLFSQKAS
ISRMVLGEQSPDIILPIHVLRNVRAISYDPLDHLVYWVDGRQNIRRARDDGTQSSVVVST
TSTHQQQPDKQPHDLSLDTYSRTVYWTCEATNTINLQRLDGDAVGVVLRDEHDKPRAIVV
NAEKGYMYFTTMQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLK
RIESSDLTGANRIVLQDSNILQPMGLTVLGEHLYWIDRQQQMIERVDKLIGEKRTRIQGR
IAYLTSIHAVEDMDPTEFDSHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLPNLLICG
DPPTCSTEQFTCATGDIDCIPMAWRCDGVAECDDNSDEENCPVCSAIQFQCDKGQCVDAQ
LRCNGEPDCADNSDEQDCDTICLPNQFRCNNKQCILKKQQCDSYNDCADNSDELFCEFLT
PPSSDVQSPSHTSTIGPVIGIILSVFVMGGMYFVCQRVVCRRYKGPNGAFPHDYISGTSH
VPLNFIAPSSSQHGTFTGISCGKSMMSSVSLMGSSCSGAPLYDRNHVTGASSSSSSSTKG
AFYPQMLNPPPSPATDRSLYNAEIFYSSNSPSTTRSYRPYLMRGVAPPTTPCSTDVCDSD
YATSRWKSNKYYMDLNSDSDPYPPPPTPRSQYLSAEESCPPSPSTERSYFHLCPPPPSPC
TDSS
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaagctacgagcaattgcaatggacgtttttctcgtggaattactgttttat
agtaccttgctctccgtagttaatggatcccccttgctgctgtttgccaaccggcgggat
gtgaggctggtggatgtggagatgggaaggccagaatcagcagtggtggtcagtgatctg
gaggatgctgctgctgtggacttcctctactctgaaggactcatcttctggaccgatgtc
agcgaggaggccatcaagcagacctactacaatcagtccaccgactctctgaaagaggcc
ttggggacaaggcaaacggttgttgtgtcgggcctcgactcccctgacggactagcttgt
gattggctgggccgtaaactatactggaccgactcggagaccaatcgcattgaggtagcc
aacctggatggcacctctcgcaaggtgctattctggttggacctggaccagcccagggcc
atcgccctgaacccagcccaccgctatatgtactggacagactggggggaggagcctcgc
atcgagagggcagggatggacggaagcaacaggaagatcatcgtggaggtggacatctat
tggcccaatggcctcaccattgacctggacgagcagaaactgtactgggcagacgccaag
ctgagcttcatacacagagccaacctggacggctcctcacgggagactgtggtggagggc
accctcacccacccgtttgccctcaccctgtcagacgagactctctactggacagactgg
cagacccgctccatccacgcctgcaacaaacacactggagacaagaggagggagatactt
agtggaatctactcccccatggacatccaagtgctgggttcagatagacagccagatatc
cataccccatgcagtgacagcaatggaggctgctcccacctgtgcctgctgtcgcccatg
caacccttttacagctgtgcatgccccactggagtcaagctcaaggaggatgggaagacc
tgtcgcccaggtgcggagcaggttcttctgctagccaggcggactgacctgaggaggatt
tctctggacctcccagacttcaccgacatcgttctgcaggtggacgacatccgccatgcc
atcgccatcgactatgaccctgtggatggatatgtgtactggacagacgacgaggttaaa
gccatccgccgctcccgcattgacggcaccgaggcccagaccctggtcaccacggagatc
aaccacccagatggcattgcggtggattgggtggcccggaacctttactggacggatacg
ggtactgaccgtattgaggttacaaggctgaacggaacctcgcgccgcattctgatctca
gagaacctggatgaaccaagggccattgtgctggaccctgtcaatggttacatgtactgg
acagactggggggagaagcctaagatagagcgtgctaacctggatggaatggaacgtctc
gtgctgctcaatacctcgctaggttggcccaacggtttagccattgactatgaagcagga
aaactgtactggggcgatgccaagacggacaaaattgaagtgattgatgtggacggctcc
aacaggatgaccctgctggaggacaagctaccccacatctttggcttcacactgctgggc
gactacatctactggacggattggcagaggaggagcatcgaaagggtccacaagaccaac
gccatccgagagatcatcattgaccagctgcctgatctcatgggactcaaggccaccaga
gtcactgaggtctccggcacaaacggctgtgtggaggataatggcggttgcagccacctg
tgtttccaccggccccagggcctgcgctgtgactgtcccatgggcctggagctccttaat
gacatgaggacgtgcgtggtgcccgaggctttcctgctcttcaccaaccgggctgacatc
cgctccatctccctcgggaccaactccaacgacgtggccatccccctcaccggggtcaag
gaggcctccgccctcgactttgacgtctccgaaaacaggatctactggactgacgtcagc
accaagaccatcagcagggccttcatgaacggcagctctgttgagcatgtgatcgagttt
gggctggactacccagaaggcatggcagtagactggatgggcaggaacgtgtactgggcc
gacacagggaccaaccgcatcgaggtggcccggctggatggacaataccgacaggtcctg
gtgtgtaaggacctggacaaccctcgctccctggcccttaaccctgccaatggctacatg
tattggacagagtggggaggcaagcccaggatcgccagggcccacatggacggcagcaac
ataatgaccctagtggacaaagtgggcagagccaacggcctcaccatcgactacatcgac
cagcgactctactggaccgacctggacacctgtatgatagagtcaaccaacatgcaaggt
ctacagagggagatagtggctgacgacctccctcatccgttcggtctgacccagtaccgg
gactacatctactggacagactggaacctgcgcagcatcgagcgggccgacaagcgctct
gggctgaaccgcaccatggtccagggacacctggagtacgttatggacatcctggtcttc
cactcctctcgccaggacggtgccaatgactgttcccagaacaacggcaactgtgcccac
ctgtgcctggcgtcgcccgccggctcccagtgccgctgtgcctcccactacatactggac
tcaaacagcaggaactgcagctccccctctagcttcctcctgttcagccagaaggcctca
atcagccgcatggttctgggtgagcagagccccgacatcatccttcccatccacgtcctc
cgcaacgtccgggccatcagctacgaccccctagaccacctggtctactgggtggacggg
cggcagaacatcaggagggcccgcgacgatggcacacagtcgtcagtggtggtgtccacc
acttccacccaccagcagcagcctgacaaacagccccacgacctaagcctggacacctac
agccgtactgtctactggacttgtgaggccaccaataccatcaacctccagcgcctggac
ggagacgccgtgggcgtggtgctgcgagatgaacatgacaaacccagagccattgtagtc
aacgccgaaaaagggtatatgtatttcacgaccatgcaggatcgctctgccaagatcgag
ggagcgtctctggatgggacggagcgggagtctttgttcaccacgggcctgatccggcct
gtagccctggccctggacaacaagctggggaaactcttctgggtggacgctgacttgaaa
cgcattgagagcagtgacctcactggagccaataggatcgtcctccaggactctaacatc
ctgcagcccatgggtctgacagtgctgggggagcacctgtactggatcgacagacagcag
cagatgatcgagagggtggacaagctgattggggagaagaggactcgtatccagggccgc
attgcctacctcaccagcattcacgctgtggaagacatggaccctacagagtttgattct
catccctgttcccgtgacaacggaggctgctcacacatctgcatcgccaaaggagacggg
acacctcgctgctcctgtcccatgcacctggtcctgctgcccaacctgctcatctgtgga
gatccacccacctgttccacagagcagttcacctgtgcaacgggcgacattgactgcatc
cccatggcatggcgctgtgacggcgtcgctgagtgtgatgacaacagtgacgaggagaac
tgccccgtgtgttcggcaatccagttccagtgtgataagggccagtgtgtggatgctcag
ctacgctgcaacggagagccagactgcgcagacaactccgatgaacaggactgtgacacc
atatgcctgcccaaccagttccgctgcaacaacaagcagtgcatcctgaagaaacagcag
tgtgactcctacaatgactgtgctgacaactctgacgagctcttctgtgaattcctcacc
cccccgtcaagcgacgttcaatcaccatctcacaccagcaccatcggcccagtcattggc
atcatcctgtcagtgtttgtgatgggagggatgtactttgtgtgtcagcgggtggtgtgc
cgccgttacaaaggtcccaacggagccttcccccacgattacatcagtggcacctcacac
gtacccctcaacttcatcgcccccagcagctcacagcacggaaccttcacaggtatctcg
tgtgggaagtctatgatgagttctgtcagtctgatggggagcagctgtagtggggcgcca
ctctatgacaggaaccatgtgacaggggcctcctccagcagctcctccagcactaaggga
gccttttatccacagatgctcaacccgcctccctctccagccacggatcgctccctgtat
aatgcagagatcttctactcctctaacagtccctccaccaccaggtcttacaggccttat
ctaatgcgcggtgtggcaccccccaccaccccatgcagcactgacgtctgtgacagcgac
tacgccacaagtcgttggaagagcaacaagtactacatggacctaaactcagactctgac
ccctatcctcccccccccactccccggagccagtacctatcagcagaggagagttgcccc
ccttctccatccacagagcgcagttactttcacctctgtcccccacccccgtcaccctgc
actgactcttcatga
DBGET
integrated database retrieval system
