Salmo trutta (river trout): 115151953
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Entry
115151953 CDS
T08542
Name
(RefSeq) rho family-interacting cell polarization regulator 1-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115151953
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115151953
Cilium and associated proteins [BR:
stru03037
]
Other cilia and associated proteins
Stereociliary proteins
115151953
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
115151953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
HR1
FAM92
DUF5955
Motif
Other DBs
NCBI-GeneID:
115151953
NCBI-ProteinID:
XP_029552189
Ensembl:
ENSSTUG00000027556
LinkDB
All DBs
Position
17:complement(26447815..26584464)
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AA seq
1102 aa
AA seq
DB search
MYSGYGGSPSKAVSTMSLSVRPSRRVISRSITRSQSFAGVNSYDKPYRNLSVFSTPRVTR
KPSRASRMFTLSAKSPPPKVPQPERLDEVYEALKRGLQSYLQVHQIELDSLSRQMRESKR
NSRLGFLYELDKQVKVVERFMRRLEFHLSKIDELYEAYCMQHRLRDGANKMVKAYTVSQG
SREARESLSEANKGYKEYTENMCMLESELENQLGEFHVKMKGLAGFARLCAGDTYEIFMK
YGRQRWKLRGRMEINGKQVWDSEDMVFLPLITEFLSIKVTELKSLANHVVVGNVSCETKD
LFAALPRTVAVDINDLGTIKLSLEVTWNPFDKDDQASAASTVNKPPTVNKRFSTYNQSPP
DTPSLREQAFYNMLRRQEEMENGTAWSNSSESSDDSSSPQLSLGLRHANKNLVQLEVQAA
APSIEISFAPRDSATSTPTRSAKPEDVQKEEPDTGTAGKEEDSGKQAVPNGQTRYSRSLS
HISENSVDGVLMDRSTCESVEPSEATSLQSGISINDIEMEMPARAESAPVTAETVVVGEP
SEPLAPATVTMEESRPESRYSAVSVESDTGLEVVSGAVSEVEPELQSSAPTRTDAVSQQG
ASLDLRADSQAQTQSTEEISYTAHRAVVVEAEKPGPVVEASPAEGEKQQAVDSEVEEALS
AVIASLDDYRGQFPELQVLEQELRLLEETLTGHTCSCSSSVQSLAVETALGSFDFLNTSD
LEDEDEEDGEKRNVTDSERHSAPGRPPEESAGEDECCEERCWESHSSGPVSTGCQALDHT
LLVHLKNCSAQLLRLGTFGPLRCGEMYALDRLLREARVLELIRRVAKETPGGATQPDEVV
PQLEQCQGATLLWQQCTNDGSVYSTSTDAFLTTLAAAYTNRLPERGVSLADTVFLRLVER
ILERRLPKRGGGAARDMLTLFQFWSYLEAEGVSELDTHIIELAEEVWLVQSLQSGDQEVL
VKALKRPPESSLKREGLHAVSLLLRDPRGKVSASASSLLRSLADQPRHRERALVSCLELL
ENESVETRVCGCKALACLKAKESIDQLVYLCRSDKEDVRDAAKQALLVLGEEGKLAHRHV
EISLQEGVPRLFSPGSMASTAF
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtggatatggagggagtccctccaaagctgtctccaccatgtccctttccgtg
cgcccatcgcgccgagttatctccagatccatcactaggagccagtcctttgccggggtc
aactcctacgataagccctacaggaacctgtcggtgttcagcaccccgagggtcaccagg
aagccctccagagccagtaggatgttcaccctctccgccaaatccccaccgcccaaggtg
ccacagccagagaggctggacgaggtctacgaggctctgaagagaggcctgcagtcttac
ctgcaggtgcaccagatagagctggacagcctgagccgacaaatgagggaatccaagagg
aactctcgtctggggtttctctatgagctggataagcaagtgaaggtggttgagaggttt
atgcgacggcttgagttccatctaagcaagattgacgagctgtatgaggcctactgtatg
cagcaccggctgagggatggagccaataagatggtgaaggcctacacagtctcccagggc
agccgcgaggccagagagagcctgtctgaggccaacaaaggctacaaagaatacacagag
aacatgtgcatgttggagagcgagctggaaaaccagctgggggagttccatgttaagatg
aagggtctagcagggttcgcacggctttgtgctggggacacgtatgagatctttatgaag
tatgggcggcagcgctggaagctgaggggaaggatggagatcaatggcaagcaggtgtgg
gacagcgaggacatggtctttctgcctctcatcacagagttcctatcaataaaggtgaca
gagctgaagagcctggccaatcatgtggtagtggggaacgtgtcatgtgagaccaaagac
ctctttgctgctctaccccggacggtggccgtggacatcaatgacctcgggaccatcaaa
ctaagcctagaggtcacctggaaccctttcgacaaggatgaccaagcctcagccgccagc
actgtcaacaaaccccccacggtgaacaaacgcttctccacctacaaccagagtcctcct
gataccccctccttacgggaacaggccttctataacatgctgaggaggcaggaggagatg
gagaatggcacagcctggtctaactcctcggagtcgtcagatgactcgtccagcccccag
ctgtccctggggctgcgtcacgccaacaagaatctggtccagctagaggttcaggccgcc
gcgccctccattgagatctcctttgctccccgagactctgccacctccacccctacccgc
tcagccaaaccggaggatgtgcagaaggaggagccagacactggaacagcagggaaagag
gaggattctgggaaacaggctgtgcctaacggccaaacacgttattcacgctccctcagc
catatcagtgagaacagtgtcgatggcgtactgatggacaggtcaacttgcgaatcagtg
gagccctctgaggccacctccctgcagtctgggatctctataaacgatattgagatggag
atgcctgctcgggcggagtcagcccctgtcacagctgagactgtggtggtcggggaacca
tctgagccactcgccccagctactgtcaccatggaggagagcaggccggagagcaggtat
tctgcagtgtctgtagagtcagacacggggttagaggttgtttcaggggctgtttcagag
gtagagccagaactccagagctctgcacccactaggactgatgctgtgtctcagcaaggt
gcctctctggatctcagggcagactcacaagcacagacccagagcacagaggaaatatca
tacactgcccacagggcagtggtggtggaggccgagaagcctgggcctgtagtagaggcc
agccccgcagagggtgagaagcagcaggctgtggacagtgaagttgaggaagccctgagt
gcagtcattgcctctctggatgactacaggggacagtttcctgagttacaggtcctggag
caggagctcagactactggaggagacattaacgggccatacatgcagttgttcgtccagt
gtccagagtctggcggtggagacggctctcggcagctttgacttcctcaatacctcagac
ctggaggatgaagatgaggaggatggggagaaaaggaatgtgacagacagtgagcgccac
agcgcccccggcaggccaccagaggagagtgcaggggaggatgagtgctgtgaggagaga
tgctgggagtcccactcctctggacctgtgagcacaggctgccaggctctagaccataca
ctactggtccatctgaaaaactgcagtgcacaacttctgaggctggggacctttgggcct
ctgcgctgtggggagatgtatgctctggaccgcctgctcagagaggcccgcgtcctcgag
ctcatcagacgtgttgccaaggagacccctggaggagccactcagccagatgaggtggtt
ccccagttagaacagtgccaaggggcaacattgctatggcagcagtgtacgaatgatggc
agtgtgtacagcacctccacagacgctttcctcacaacactggccgctgcttacaccaac
agactgcccgagagaggagttagcctggcagacacagtgttcttgcgtctggtggagagg
attctggagaggaggctgcccaagcgtgggggcggggcagccagagacatgctgaccctc
ttccagttctggagctacctagaggccgagggagtgagcgagttggacacacacatcatt
gaactagcggaggaggtgtggctggttcagagcctgcagtcaggggaccaggaggtgctg
gtgaaggccctgaagaggcctccagagagcagcctgaagagggagggcctgcatgctgtc
agcctactgctcagggacccgcgggggaaggtgtctgcctctgccagctccctgctccgg
agcctcgccgaccagccacgccatcgagagagggccctagtaagctgtctagagcttctg
gagaatgagagtgtggagacgagagtgtgtggctgtaaagcacttgcatgtctgaaggcc
aaagagagcattgaccagctggtctatctctgtcgatcagacaaggaggatgtgagggat
gctgccaaacaagcgctgctggtgcttggtgaggaggggaagttggcccacagacatgtt
gagatatcactgcaggagggagtgccacgcctcttctcccctggcagcatggccagcacc
gccttctaa
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