Salmo trutta (river trout): 115151954
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Entry
115151954 CDS
T08542
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115151954 (ctcf)
03036 Chromosome and associated proteins [BR:
stru03036
]
115151954 (ctcf)
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115151954 (ctcf)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115151954 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
115151954
NCBI-ProteinID:
XP_029552192
Ensembl:
ENSSTUG00000027473
UniProt:
A0A674AX70
LinkDB
All DBs
Position
17:complement(26440242..26447400)
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AA seq
797 aa
AA seq
DB search
MKYSFLVQVLPMDGGPTDVVVEAKDSITYEGEEVVADLLQQAAEGVMDQQPVGEGGLDPQ
ELVDGVNVEMMVMDSLDPALLQMKTEVMDAPVVTAHEATVTTVDETQIITLQVVNLEEQQ
LGGLGELQLVQVPVSAVPVTQATVEELQGTFVDATAMPKDGNPMICHTLPLPEGFQVVKV
GANGEVETVEQDELQHQEEEQQVQPEEEEEELHCEPQPEDPQWTTDPDYQPPAKKTAKKA
KKSKLRYNTEGDKDNMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKT
FQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQ
DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS
YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTV
IARKSDLGVHLRKQHSFIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCR
QERHMLMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTAFVCTKCGKTFT
RRNTMARHAENCNGDPTEGENGTPPKRGRGGRKRKMRSRKDDDDDSEDNADPELDDIDEE
DEDAEEALLEEEEEMELEQAPPTKPIPAPVEPPVKRKRGRPPKNAPKPASPAKASKAAPK
GKAAAAAAIIQVEDENTGVIENIIVKNEPEAEQAAIEVVVEQSEEAEAGVETVELPVAEA
APNGDLTPEMILSMMDR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcctttctggtgcaggtattaccgatggacggcggaccaaccgacgttgtg
gttgaggccaaggacagcatcacctatgagggggaggaggtggtggcagacctgctccag
caagcagcagagggggtaatggaccagcaacctgtgggagaggggggcctagatccccag
gagctggttgatggagtcaatgtggagatgatggtaatggattccctggacccggccctg
ctgcagatgaagactgaggtgatggacgcccctgtggtcacagcccacgaggccacggtc
accacagtggatgagacccagatcatcactctgcaggttgtaaatttggaggagcagcag
cttggaggtcttggggagctacagctcgtccaggtgcctgtctctgctgtgcctgtaaca
caggccactgtagaggagctacagggcaccttcgtggacgccacggccatgcccaaagat
ggaaaccctatgatctgccacaccctgcccctgccagagggcttccaggtggtgaaggtg
ggtgcgaatggtgaggtggagacagtggagcaggatgagctccagcaccaggaggaggag
cagcaggtccagcctgaggaggaggaggaggagctgcactgcgagccccagcctgaagac
ccacagtggaccacagacccagactaccaacccccggccaagaagactgccaagaaagca
aagaagagcaagctgcgctacaacactgagggggacaaagacaacatggacgtgtctgtc
tatgactttgaggaggagcagcaggaggggatgctctctgaggtcaacgcagagaaggtg
gtgggcaacatgaagccccccaaacccaccaagatcaagaagaagggtgtgaagaaaaca
ttccagtgtgagctatgtagctacacctgtccccgccgctccaacctggaccgacacatg
aagagccacacggacgagaggccccacaagtgccatctgtgtggaagggccttcaggacc
gttaccctgctgaggaaccacctcaacacacacacaggtaccagaccacacaagtgtcaa
gattgtgacatggcctttgtgaccagcggagagctggtccgacatcgtcgctacaagcac
actcatgagaaacctttcaagtgctccatgtgtgactatgccagtgtggaggtgagcaaa
ctgaagcggcatatccgttcccacactggggagcgtccgttccagtgcagtctgtgcagc
tacgccagcagagacacctacaagctgaagagacacatgaggacacactcaggagagaag
ccgtacgagtgctacatctgccacgcccgtttcacccagagtggaaccatgaagatgcac
attctgcagaagcacacagagaacgtggccaagttccactgcccccactgtgacacagtc
atcgcccgcaagagtgacctgggcgtccatctgcgtaagcagcactcattcattgagcag
ggccggaaatgccgttactgtgatgctgtgttccacgagcgctatgctctcatccagcac
cagaagtcccacaagaatgagaaacgcttcaagtgtgaccagtgtgactactgctgcaga
caagagcgtcacatgctgatgcacaggcgcacccacacaggagagaagccttacgcctgt
agccagtgtgagaagaccttccgtcagaagcagctcctggacatgcacttccggcgctac
catgaccccaactttgtgcctactgcctttgtgtgcaccaagtgtggcaagaccttcacc
cgcaggaacaccatggctagacatgcagagaactgtaacggagatcctactgagggagag
aatggaaccccacccaagagaggacgaggtgggaggaagaggaagatgcgctcaaggaag
gacgatgatgacgatagtgaggacaatgctgatcctgagctggatgacattgatgaagag
gatgaggatgccgaagaggcactgctggaggaagaggaggagatggagttggagcaggct
ccacccaccaagcctatccccgcccctgtggagccgcccgtcaagaggaaacgtggtaga
ccccccaagaatgcgcccaaacctgcctcacctgccaaagctagcaaggctgcccctaag
ggcaaggctgctgcagcagcagccatcatccaggtggaggatgagaatacaggtgtcata
gagaacatcatagtgaagaatgagccagaggctgagcaggctgccatagaggtggtggtg
gagcagtcggaggaggcagaggcaggggtggagacagtggagctgcctgtagcagaggct
gctcccaacggagatctcacccctgagatgatcctcagcatgatggaccggtga
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