Salmo trutta (river trout): 115151996
Help
Entry
115151996 CDS
T08542
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
KO
K10373
tropomyosin 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
stru04814
Motor proteins
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115151996
04820 Cytoskeleton in muscle cells
115151996
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115151996
04261 Adrenergic signaling in cardiomyocytes
115151996
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115151996
04147 Exosome [BR:
stru04147
]
115151996
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
115151996
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of microglial cells
115151996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
TMF_DNA_bd
DUF3450
PUMA_CC
Lebercilin
DUF745
Crescentin
GAS
CENP-F_leu_zip
DUF724
Motif
Other DBs
NCBI-GeneID:
115151996
NCBI-ProteinID:
XP_029552268
Ensembl:
ENSSTUG00000048203
LinkDB
All DBs
Position
17:29791041..29808418
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDEISELEKKLRITEDERDKV
LDEFQAAEEKLLSAEEVATKAEADVASLNRRIQLVEEELDRAQERLTTALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDMERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQSEKYSHKEDKYEEEMKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEEKLAHAKEENLDMHQMLDQTLMELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagggagccgagggagacaagaaggcagcagaggacaagagcaaacagttagag
gatgaaataagtgagttggaaaagaaattgcggatcaccgaagatgagagagataaagtg
cttgatgaattccaagccgccgaggaaaaattgctgagtgccgaggaggtggccaccaag
gctgaggccgatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctgacgactgccctgaccaagctggaggaggctgagaaggcggct
gatgagtctgagagaggcatgaaggtcattgagaacagggcctccaaggatgaggagaag
atggagctgcaggagatccagctgaaggaggccaagcacatcgctgaggaggctgaccgc
aaatacgaggaggttgcccgtaagctggtcatcattgagagtgatatggagcgtacagag
gagcgcgctgagctttcagaaggcaaatgctctgagcttgaagaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccagtctgagaagtactcacataaggaggacaag
tatgaggaggagatgaaggtcctcaccgacaagctgaaggaggctgagacacgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgacgacttggaagagaaactg
gcacatgctaaagaggagaaccttgatatgcaccagatgctggaccagactctaatggaa
ctaaataacatgtga
DBGET
integrated database retrieval system
