Salmo trutta (river trout): 115152118
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Entry
115152118 CDS
T08542
Name
(RefSeq) interferon regulatory factor 7-like
KO
K09447
interferon regulatory factor 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04622
RIG-I-like receptor signaling pathway
stru04623
Cytosolic DNA-sensing pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115152118
04621 NOD-like receptor signaling pathway
115152118
04622 RIG-I-like receptor signaling pathway
115152118
04623 Cytosolic DNA-sensing pathway
115152118
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115152118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115152118
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115152118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
115152118
NCBI-ProteinID:
XP_029552514
Ensembl:
ENSSTUG00000042851
LinkDB
All DBs
Position
17:complement(35254403..35264080)
Genome browser
AA seq
416 aa
AA seq
DB search
MQSCKPQFADWLIEQVRTEQYTGLFFMDNNKFRVPWKHNSRKDCSEDDRKIFRAWAVVSG
KITEHPNDKAKWKTNFRSALNSLCRRFKMVEDHSKDSNDPHKVYLVINEYNYESPHIEEI
TLENYGIDHALTPTENTPPGMEHDILNFSNLTLNHLDLNQHTENYIPVHTHHPVPPVLIQ
QPYAQVNPDALLNLPAAHSSLWDLEITISYRGSEMLKTQVSGPRVQLHYQCNALEPNTQP
LCFPSTDGLPDHKQIDYTNCILRSVQRGLLLEVQNTGIYGYRQDKCHVFSSTSNPREAHP
EPRKMPQNEMVQLLNFQQYENELIAFKENRRGSPEYTIHMCFGEKFPDGKPLEKKLIVVK
VVPLICRYFHEVAQQEGASSLQNDNISLQISHHNSLMELINATWPNGPQHTMGQYF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctgcaaacctcagttcgctgactggctgatagaacaggtgcggaccgagcaa
tacaccggtttgttctttatggacaacaataagttcagagtcccgtggaaacacaattct
aggaaggattgctccgaggacgaccgtaaaatattcagggcatgggcagtggtcagcggt
aaaatcactgagcatcccaatgacaaggcaaagtggaagactaacttccgctctgcactg
aacagcctgtgcaggcgtttcaagatggtggaagaccactctaaggactcaaacgacccc
cataaagtctacctggtcatcaatgagtataactatgagagcccgcacatagaagaaatc
actctggagaactatggcattgaccatgctctcacccctacagaaaacacccccccaggc
atggagcatgatatactgaactttagcaacctaaccttgaaccacctagacctgaaccaa
catacagagaattatataccggtacacacacaccacccagtgccaccagtcctaatacag
cagccatatgcccaagtaaacccggatgccctgctcaacctgcctgccgcccactcatct
ctctgggacttggagatcaccatctcctatagggggagcgagatgctaaagacccaggtg
tcaggccccagggttcagctccactaccagtgtaatgctctcgagcccaacacccagccc
ctctgcttccccagcactgacgggctaccagaccacaaacagattgactacaccaactgc
atcctaagaagcgtccaaaggggtcttctcctcgaggtacaaaacactggtatctatggt
taccggcaggacaagtgccacgtgttctccagtactagcaaccccagagaggcacacccc
gaacccaggaagatgccccaaaatgaaatggtacaactgttgaacttccagcagtacgaa
aatgagctgatagcgtttaaggagaacaggcgaggctcacctgaatataccatccacatg
tgctttggtgagaagttccctgacggaaaacccctggagaagaaactcatcgtcgtcaag
gtggttcccctgatctgtcgttacttccacgaggtggcccagcaggagggggcgtcgtcc
ctccagaatgacaacatcagcctgcagatctcccaccacaacagcctgatggagctcatc
aatgccacctggcccaacggcccacagcacaccatggggcagtacttctag
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