Salmo trutta (river trout): 115152130
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Entry
115152130 CDS
T08542
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115152130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115152130
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
NGL family
115152130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Mid2
DUF7617
Sp38
Ig_6
DUF4293
Ntox46
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
115152130
NCBI-ProteinID:
XP_029552529
Ensembl:
ENSSTUG00000043580
UniProt:
A0A674DMI5
LinkDB
All DBs
Position
17:36763409..36952633
Genome browser
AA seq
645 aa
AA seq
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MLNKMTSSRQQQTMRGPRWNRALSDPLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLGNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIKTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRSTVWQKVGPTP
SAGSWETVSSTSTTTTMARTPLSTQATEKTFTIPVTDLNDSSMTGLDEVMKTTKIIIGCF
VAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTGGPAMEGHLTLPPLEH
EHLNHYNTYKSAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttctcggcagcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgaccctttgtttgtgctgctcctagccctccagctcctggcggtggcg
ggcctggtgcgcgctcagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacgcggcgggggctccgtgaggtccccgacggcatctccaccaacacacgc
tacctgaacctgcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctgcagctgagcaagaaccacatccgaaacattgagattggggcc
ttcaacggcctggccagtctcaacaccctggagctgtttgacaaccgcctcaccacaatc
cccaatggggcctttgagtacctctccaagctcaaggagctgtggctaaggaacaacccc
atcgagagcattccctcgtatgcgttcaacagggtaccctcgctacggaggctggattta
ggggaactcaaacgcctctcgtatatctcagagggggctttcgagggcctcggcaacctg
cgctacctgaacctgggcatgtgcaatctgaaggagatccccaacctcatcccactcgtc
aagctggatgagctagagatgtcagggaaccagctgacggtcatcagacctggctccttc
aaagggttgatccacctgcagaagctgtggatgatgcatgcccagatcaaaaccattgaa
aggaactcctttgacgacctgcagtcgctggtggagctcaacctggcccacaacaacctc
accctgctgccccatgatctcttcacccccctgcaccacctggagagagtccacctccat
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gttccagccaacaccagctgctgcgctcgctgcagttccccagccagccacaagggacgc
tacataggtgagctggaccagaactatttccactgttatgcacctgttattgtggagcca
ccagcggacctgaacgtgacagagggtatggctgcagagctgaagtgcagggccagctct
ctgacctcagtcagttggattacgcccaatggctccatcatgacccacggtgcgtacaag
atccgcatttctgtgctcaacgacggcacgctgaacttcaccaatgtcaccatgcaggac
acgggaacctacacctgcatggtaagcaactcagcaggcaataccacagcatctgccact
ctcaacgtgtcttccacagagaacgtcctcagctactttaccacagtgacagtggagacc
atcgagccagtgcacgacgaggggcgctccaccgtgtggcagaaggtgggccccaccccc
tccgccggatcctgggagactgtgtcgtccacctccaccaccaccacaatggcccggacg
cccctctccacccaggccacagagaagacctttactatccctgtcacggacctgaacgac
agctccatgaccggcctggatgaggtgatgaagaccaccaagatcatcatcggctgcttc
gtggccatcaccctcatggccgccgttatgctaatcatcttctacaagatgaggaagcag
caccaccagcagaaccaccatgcgccacagcgcaccatcgagatcatcaacgtagacgag
gactgtgtgacaggcgggccggccatggagggccacctgactctgcccccgctggagcat
gagcacctgaaccactacaacacctataagtctgcgtacaaccacgtctccactatcaac
tccatacacagctcggcgcacgaacctttgttaatccgggccagttcgaaagacaatgta
caagagacccagatctaa
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