Salmo trutta (river trout): 115152198
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Entry
115152198 CDS
T08542
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115152198
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Cadherin related
115152198
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
Cadherin_pro
EGF
Cadherin_4
hEGF
Big_9
EGF_Teneurin
EGF_Hmr-1
EGF_2
cEGF
Motif
Other DBs
NCBI-GeneID:
115152198
NCBI-ProteinID:
XP_029552653
LinkDB
All DBs
Position
17:40702484..40801200
Genome browser
AA seq
2786 aa
AA seq
DB search
MEALDADSGKNAELTYFPVPKNGSFYVVPKTGEVLLMDSLLGLLSVIKFYVFAKDHGWPC
RISKGVEFTVTPRQWCPLRPGQTGELGSLGRAGRMHRALLDSGSMVFLNVSEDASIGSVV
MSLSPARFQAASFELVYPKTDITPINVGKESGDIVIAMRLDRETEPFIEITVKIQDERGP
DWYLTKVKLRVTDVNDNVPEWAMEPYPYLAVVSPEAPPGELVYPLHARDGDEGSSGEVEY
FLADGGNGCFAVDKKSGHILTTGLPLQRDREYLLSVVAFDMLGSRSAPAMVSVIAGPRTP
QFTKASYAISIPENTPEGQPFLVMFAISFQKQPISYSLLINPSSLFRMQQETGEISLTRT
LDYENDQRRYLLMVRASEGRGGLSSAIEVQVVITDENDCVPEFLQSIYSVDGVPETVTTA
TSLLQVLASDCDSGSNAELTYYTLSPDFSISAHGTIFPVGRLDYERPNHLYEFVVMAVDN
GEEPHSGTATIRLRMANVNDQAPEFSQTVYRTFVAEDAGPNTLVATVLAKDPDGDGIVYS
FTAGNEEGNFVIDSQKGLIRLRSTPPPKLQGLEYVLNVTATDDNTSGGPHPLSATARVIV
GVDDVNNNKPIFEKCQQYREQASVLENQPTGTFVLQVHAVDADEGANGKVKYGLMHRDRA
MPAFRVHPDTGVIVTARRFDRERQREYSITVTATDWADEPLIGICQLNVLILDQNDNSPK
FENLRYEYFLREDTMIGTSFLRVAAHDDDFGTNAVVTYSMSQEQPEYLRVNPVTGWVYVN
QPISQRSYITREVVATDGGNRSTSVELSVTITNVKNQPPQWEKDSYSVVIPENTARDTSI
VTIKATSLLGDPRVTYNLEEGVVPETNMPVRFYLSPNREDGSASILVSEPLDYETTPSFS
LRVRAQNVAAVPLAAFTTIYVNVTDVNDNVPFFTSSIYEASVTEGAKVGTMVLQVSAHDK
DLGLNGQITYSLLSDSSGDHRLFRVDPELGSIYTEAVFDREAQGSYLLEVQSEDGMESAR
PGRNKQPNFDTAYVRVFISDVNDNKPVFAQRLYEVGIDEDADVGLAVVTVGANDEDEGAN
AKLRYQITSGNTGGVFDMEPEVGTIFIAQPLDYELQKRYKLLVLASDGKWEDYAAVVVNV
VNKNDEAPVFSMNEYYGSVTEELDGSPVFVLQVTATDPDKDADQVAVRYSLHGQGSQSKF
VIDEITGKMYAQKTLDREERAVWRFVVLATDEEGEGLTGFTDVIINVWDINDNAPSFVCV
PDSCHGNVAENSPPGTFVMEMTATDLDDTAVGQNAILSYRILENAHDAGAADFFTVDAST
GTISVATRGLDREVAERHQLVVEAKDGEGRMGTATATIIITDLNDHTPRFKDEWCGARVS
ESSPPDSTVLKLDAVDPDSGPHGLLGFSVVAGDQGERFYMVSHKAEQSGTLRLRKRLDYE
RPGEQQFNLTIRVEDSDFSSVIHCIIQVVDENDHAPLFAPTSYSLAPLPEDVAVGTSITQ
VMASDSDSDLNGEIIYSISPESDPYGHFTVDGNGVMTVTRPLDREIVSEYQLVVLATDRG
SPALTGSTTVQLSLLDVNDNGPELEVTYNPVLWENSPAPQVVWLNQTSTLLHVIDRDSPE
NGPPFSLSLPRLYATDFHLQDHGDGTATLTALHRFDRERQREFFLPVVMTDSGGPPMTVT
NTLTVTVGDQNDNAHQEGEKEIYVHSRRGKMQTTSLGKVYAPDPDDWDNKTYTLDARGMK
YFTLDKSTGDLAIRQNTLAGSYYLRVGVSDGVWPDVVSGVTVHVRELEDKAIHLSASLRL
TGITARDFIESQVDKTSRQDMFRGFLSEHLSVRSGAINVFSLTDVGLKALDVRFSVHSDS
YLRPEKLHGYLAVHKKKLQSLLRVNVSQVQVDECVYTDCRAGGGCSTYLSVSDTPTLVDA
GNMALVSVTVTSSAVCGCTARDRVHQACSSYPTNPCFNGGTCMDTLSGYRCQCPPQYEGP
ECQQTRRSFFGNGYAWFPPIRPCFDSHLSLEFITGAEDGLLLYSGPLATLLPGDPEDYMA
IELIGGTPSLKINHGSGTLVLQLPGNVVVSDRRWHRLDVRSNSKEVRFTLDRCSSAIVME
TEGVDSWAMTEDRSSCEVRGVTPNRDRYLNGSQVLQLGGVNENMSYEYPQLQHKHFTGCL
RNLVVDSALYDLGYPSESSSSAPGCSLTDGNCVNMGVPVCGARGRCNGQWDSFRCQCGPG
YTGIHCEDEVPEFSFDGRSHVQYQVGWSLPARHTSVQLQVRTQVPSGVLLSLLSQEQNEY
LRLEVFQGLLAVFYNLGDRLYNLTLPFQRLDNGEWHEVELDRHGKEFTLRLDGGGGRQEV
TAAPGTSQEIVIDQTVVMLGNTFPSGNNHSFLGCLRDLRLNGRPMPMAKQPSVGSKGLQV
VTSQGVSPGCPSDACRKHQCSPPFICVDLWRKHECRCPPGHMTKENDSSKVCVYTLCVSR
PCRHGTCVAHSPAKYSCHCSEGYRGRHCEVSLTLYHNNDNNTLSLSSAFAISICVLAFLV
LMLGLSLYSCWRRHKGLKEGVYHVSAHHGEWEDIRENVLNYDEEGGGEQDQNAFNMVELQ
RSLRPSPAQSLWYSYPQCIISYPQTTKPPDTKNGTKPKGPNGPKNGSTAIALRLAHPPSG
SATLTSPIAMRRSHKSLSFSSQDLARYLCEVIRDTDRSPGDNPGYMTSLRPLSNKAQRGR
LAVRSLSSLSDEGQGSEVRVQGGQESLERQRSQSPRLDRLKALRAVASELRVDGAVDSAA
AKSTEGQKDKVKDRECRAQPNCEKSG
NT seq
8361 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcttgatgcagacagtggaaagaacgcagagttgacgtacttccctgttccc
aaaaacggcagtttctacgtggtaccaaaaactggtgaagttttgctgatggactcccta
ctgggcctcctatctgtaatcaagttctatgtttttgctaaagaccatggttggccctgc
agaatcagtaagggtgttgagttcacggttaccccacgacagtggtgcccactgcgccca
ggccagacaggggagttgggcagcctgggcagggcagggcggatgcatagggcattgttg
gactctggtagcatggtcttcctcaatgtctccgaagatgcaagcatcggttctgtcgtt
atgagcctgagcccagccaggtttcaggcagcctcctttgagctggtttacccgaagaca
gatattaccccaatcaacgtgggcaaggagagtggagatatcgtgatagccatgcgcctg
gacagggagactgaaccgttcatcgaaatcactgtcaaaatacaagatgaacgagggcct
gactggtacctgaccaaggtgaagctgagggtgacagatgtcaacgacaacgtccccgag
tgggccatggagccttacccctacctggcagtggtgtcccccgaggccccccctggggag
ctggtgtacccgctccacgctcgcgacggggatgagggcagtagcggcgaggtggagtac
ttcctggctgatggtggtaatggctgctttgcggtggacaagaagagtggtcacatcttg
accacaggtctccccctgcagagagacagggagtatctgctgagtgtggtggcatttgac
atgctgggcagtcgcagtgctccggccatggtgtcggtcatagcaggacccagaacacca
cagttcaccaaggcatcctacgccatttccataccagagaacaccccagagggacagccc
ttcctggtgatgttcgccatctccttccagaagcagccaatcagctacagcctgctgatc
aaccccagcagcctgttcagaatgcagcaggagacaggggagatcagcctgacccgcacg
ctggactatgagaatgaccagagacgttacctccttatggtcagggccagcgaggggcga
gggggcctcagcagtgccatagaggtccaggtggttataacggacgagaacgactgtgtc
ccagaatttctccagtccatttacagtgttgatggagtccctgagacagtaaccacagca
acctctctcctgcaggtgttagccagtgactgtgactcggggtcgaatgcagaactcaca
tactacactctaagcccagacttcagcatttcagcccacggcaccatcttccctgtgggc
cgtctggactacgagaggcccaaccacctgtatgagtttgtggtgatggcggtggataat
ggggaggagcctcactctggtaccgccaccatccgcctccgcatggccaatgtcaacgac
caggcccccgagttctcccagactgtctatcggacctttgtcgccgaggacgctggcccc
aacacactagttgccacggtactggctaaggacccagacggtgatggaatagtgtactca
tttacagctggcaacgaggagggcaactttgtcattgacagccagaaagggttgatccgg
ctgcgctccaccccccctcccaagctccagggcctggagtatgtcctcaatgtgacggct
acggacgacaacacttccggagggccacacccactctctgcaacggcccgggtcatcgtg
ggtgttgatgatgtcaataacaacaaacccatctttgagaagtgtcagcagtacagggag
caggcgtctgtgttggagaaccagcccacagggaccttcgtgctgcaggtgcacgcggta
gatgcagacgagggggccaatgggaaggtcaagtatggcctgatgcacagagacagagcc
atgcctgccttcagagtccaccctgacacaggtgtgatcgtgacggcacggcggttcgac
cgggagcgtcagagagagtactccatcacggtgacggctacagactgggctgacgagcct
ctcatagggatctgtcagctcaacgtcctcatcctggaccagaatgacaacagccccaag
tttgagaacctgcgctacgagtactttctgagagaggacaccatgatcggcaccagtttc
ttgcgtgtggcggcgcacgatgatgactttggcaccaacgccgtcgtcacctactccatg
tcccaggagcagcctgagtacctgagggtcaaccctgttaccggctgggtgtacgtcaac
cagcccatatcacagaggtcctacatcacacgggaagtagttgccacggacggggggaat
cgcagcacatctgtggagctgtctgtcaccattaccaacgtgaagaaccagcccccgcag
tgggaaaaggacagctacagcgtggtcatcccagagaacacagccagggacacttccatt
gtgacgatcaaagcgacctcgttgctaggcgaccccagggtgacttataacctggaggag
ggcgtggtcccggagactaacatgcctgtgcggttctacctgtcgcccaaccgcgaggac
ggctctgcctccatcctggtgtcggagccgctggactatgagaccacacccagtttctcc
ctgagggtgcgggctcagaacgtggcggcagtaccactggctgcattcaccacaatctat
gtcaacgtcacagacgtgaacgacaatgttcccttcttcacctcctccatctatgaggca
tcagtgactgagggagccaaggtggggaccatggtcctccaggtgtctgctcacgacaag
gacctaggtctcaacggacagatcacctactccctcctgagtgacagtagtggggaccac
cgtctgtttcgtgtggatccagagctgggctccatctatacagaggcggtgtttgaccgc
gaggcacagggatcctacctactggaggtgcagtctgaagacggcatggagtcagcacgg
cccgggaggaacaaacagcccaactttgacacagcatatgtgcgggttttcatcagcgac
gtgaacgataacaaacccgtctttgctcagcgtctctatgaagtcggcattgacgaggac
gcagatgtcggcctggctgttgtcaccgtcggtgctaatgacgaagatgaaggtgccaac
gccaagctgcgttaccagatcacatcgggcaacaccggaggggtgtttgacatggagcct
gaagtgggaaccatcttcatcgcccagcctctggactacgagctgcagaagaggtacaag
ctgctggtgctggcatcggacgggaagtgggaggactacgctgctgtggtggtcaacgtg
gtcaacaagaacgacgaggctccagtcttctctatgaatgagtactacggctcagtgacc
gaggagctagatggctcgccggtctttgtgcttcaggtgacagccacagacccagacaag
gatgcagaccaagtcgctgtgcgctactctcttcatggtcagggatcgcagtctaagttt
gtgatcgacgagatcacagggaaaatgtacgcccagaagacactggaccgcgaggagcgg
gcagtgtggcgctttgtggtcctggccacagacgaggaaggggaggggctcaccggcttc
actgacgtcatcatcaacgtgtgggacatcaatgacaacgcaccttccttcgtctgcgtg
cccgacagctgtcacggcaacgtggccgagaactcgcccccaggtaccttcgtcatggag
atgacggcgacggaccttgatgacacggcggtgggtcagaacgccatcctctcctaccgt
atcctggagaacgcgcatgacgcgggcgccgccgacttcttcaccgttgacgccagtaca
ggcaccatctcagtggcaaccagagggttggacagggaggtggcagagcggcaccaactg
gtggttgaagccaaggatggagagggtaggatgggcacggctaccgccactatcatcatc
acagacctgaacgatcataccccccggttcaaagacgagtggtgtggggctcgtgtgtct
gagagcagccctccagactcaaccgtgctgaagctggacgctgtggacccagactcaggg
cctcacggcctgctgggcttcagtgtggtggcaggggaccagggggagaggttctacatg
gtgagccacaaagcagagcagtctggaactctgaggctgaggaagaggctggattacgag
aggcccggcgagcaacaattcaacctcaccattcgtgtggaggactccgacttctccagc
gtcatccactgcatcatccaggtggtggacgagaatgaccatgccccactgttcgccccc
acctcctactccctcgcccctctgccagaggatgttgcagtgggaaccagcatcacccag
gtgatggccagcgactcagactctgacctgaatggggaaataatctatagcatctcccca
gagtcagacccgtatggtcatttcacagtggacggaaacggcgtcatgaccgtgacccgg
ccgctggacagagaaatcgtgtcagagtaccagctggttgtcctagcgacagaccggggt
agtccagccttgacgggtagcaccacggtccagctgagcctgctggatgtaaatgacaat
gggccagagctggaggtgacctataaccctgtcctctgggagaacagccctgctccacag
gtggtgtggctaaaccaaacctccaccctgctccatgttatcgaccgggactcccctgag
aatgggcctcccttctccctctccctccctcgcctctacgccactgacttccacctgcaa
gaccatggcgatggcacggcaacgcttacagcactgcaccgcttcgaccgcgagcggcag
agggagttcttcctgcccgtggtcatgacagacagcggtggtccgccaatgacggtcacc
aacacactcaccgtcaccgtgggcgaccagaacgacaacgcccaccaggagggagagaag
gagatttacgtccacagccggaggggaaagatgcagactacttcgctgggcaaggtctat
gcccctgatcccgatgattgggacaacaagacctacaccttagacgcaagaggaatgaag
tatttcaccttagacaagagtacaggtgacctggccatcagacagaataccctagcgggc
agctactatctcagagtgggcgtgtcggatggtgtgtggccggacgtggtgtcgggggtc
acagttcacgtgcgggagctggaggacaaggcaatccatttgtcagcctccctgcgtctc
acaggcatcactgccagggattttattgagtcccaggtggacaagacgagtcgacaggat
atgttcaggggcttcctgtctgaacacctgtccgtcagatcaggcgccatcaacgtattc
agcctgacagacgtaggactgaaggcgctggacgtgcgcttctctgtgcacagcgacagc
taccttcgcccagagaaactacatggataccttgcggtgcataaaaagaagctgcagtct
ctgctgcgggtgaatgtgtcccaggtacaggtggatgagtgtgtgtacacagactgcagg
gcgggtgggggttgctccacatacctcagcgtcagtgacacacccaccctggtggatgct
ggcaacatggccctggtgtctgtgacagtgacttcctcagccgtgtgtggctgcaccgcc
agggaccgtgtccaccaggcctgttcctcctaccccacaaacccctgcttcaatggaggc
acctgcatggacaccctcagcgggtacagatgccagtgcccaccgcagtacgagggtcct
gagtgccagcagacaaggcgaagtttctttggcaacggctatgcctggttccctcccata
aggccgtgctttgatagccatctctccctggagttcatcacaggggctgaggatgggctg
ctgctctacagcgggcccctggccaccctgcttcccggagacccagaggactacatggcc
atagagctgattggtggaacacctagcctgaaaatcaaccatgggtctggaaccctggtc
ctgcagttgccgggaaatgtggttgtgtccgacagacgctggcaccgtctggatgttagg
agcaacagtaaagaagtacgtttcaccctggatcgctgctccagtgccattgtcatggag
acggagggcgtggacagctgggccatgaccgaggaccgctcttcttgtgaagtcagagga
gtcacgcccaatagggacaggtacctgaatgggagtcaggtgttgcagctgggtggtgtc
aacgaaaacatgtcctatgagtatccccagctacagcacaagcacttcaccggatgtctg
cgcaacctggttgtggatagtgcgctctatgaccttggttatccctctgagtcctccagc
agtgccccaggctgctctctgactgatgggaactgtgtgaacatgggtgtaccagtctgt
ggggccagggggcgctgtaacgggcagtgggactccttccgctgccagtgtgggcccggt
tacacagggatccactgtgaagacgaagtcccagagttctccttcgatgggaggagccat
gtccagtaccaggtgggctggtctctcccggcccgtcacaccagcgtgcagctccaggtg
cgaacccaagtccccagcggtgtcctcctcagcctcctctcccaggagcagaatgaatac
ttgcgtctggaggtgtttcaggggctactggctgtcttttacaacctgggtgacagactc
tacaacctcacgctgcccttccaacgccttgacaacggagaatggcacgaggtggagctg
gatcgtcatggcaaagagttcacccttcgattggatggtggcggcgggaggcaagaggtc
acagccgctcctgggactagtcaggagatagtcatcgatcaaacagtggtgatgctgggg
aacactttcccttcaggaaacaaccacagcttcttagggtgtctgcgagatctgaggctg
aacgggaggcccatgcccatggcaaagcagccctccgtggggtccaagggcctccaggtg
gtcacatcccagggggtatccccaggttgcccctcagacgcctgcaggaaacaccagtgc
tctccccccttcatatgtgtggacctctggaggaaacacgagtgcaggtgcccccctggt
cacatgacgaaggagaatgactcgagcaaggtgtgcgtctacacgctgtgtgtcagcagg
ccctgtcgccacggcacctgtgtggcccactcgcctgccaagtactcgtgtcactgctcg
gagggctaccgtgggcgccactgtgaggtctctctgacgctctaccacaacaacgacaac
aacactctgagcctcagctctgcgtttgccatcagtatctgtgtcctagccttcctagtg
ctgatgctgggcctgtccctctactcctgctggaggagacacaagggcctgaaggagggc
gtctaccacgtctccgcacaccacggagaatgggaggacatccgagagaacgtgctcaac
tatgacgaggagggtggaggggagcaggaccagaatgccttcaacatggtggagttacag
aggtctctgcggcccagtccagcccagtcactgtggtacagctacccacaatgcatcatc
tcctaccctcagacgaccaagccgccagacacgaagaatgggaccaaaccaaaaggacca
aatggacccaaaaacggcagcacagcaatcgccctgcgcctggcccaccctccgtccggg
tcagccaccctcacctctcccattgcaatgcggcgttcccacaagtccctgtccttctcc
agtcaggacctggcccgctacctgtgtgaggtcatcagggacacggaccgctccccgggg
gacaaccccggctacatgacctcactgcgtcccctgtccaataaggcgcagcgtggtagg
ctggccgtgcgctcgctcagctccctcagcgatgaaggtcaggggtcagaggttagggtt
caggggggtcaggagagcctggagcgtcagagatcccagagcccacggctggacaggctc
aaagcactgcgagctgttgccagtgaactcagagtggacggtgctgtggactctgctgcc
gccaagagcacagagggacagaaggacaaagtgaaggatagagagtgcagggcgcagccc
aactgtgagaagagcggatga
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integrated database retrieval system