Salmo trutta (river trout): 115152275
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Entry
115152275 CDS
T08542
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115152275
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115152275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
115152275
NCBI-ProteinID:
XP_029552831
Ensembl:
ENSSTUG00000020447
LinkDB
All DBs
Position
17:45160015..45176210
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AA seq
468 aa
AA seq
DB search
MPQKEYYNRATWESGVASMMQNKVYDICNEGHSGVNQLGGVFVNGRPLPDSTRQKIVELA
HSGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVA
TPEVVGKIAIYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSLSVSSINRVLRNLASEK
QQMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNTDGCPQSDGGGENTNSISSNG
EDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI
QVWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQPTTPGWISFSSGS
MLGRPDTALTNTYSALPPMPSFTMANNLPMQAPVPSQTSYSCMLPTSPSVNGRSYDTYTP
PHMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaaagaatactataaccgggccacgtgggaatctggcgttgcgtccatgatg
caaaacaaggtgtatgacatctgtaacgaaggtcacagcggagtgaatcagctcggcgga
gtgttcgtcaacggcagacccctgcccgactccaccagacagaaaatagtcgagcttgct
cacagtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaa
gtccaagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcaga
tactatgaaacaggctccatccgaccaagggcgatcgggggtagcaaaccaagagtagca
actccagaggtggtcggaaaaattgccatatacaagagggagtgcccgtcaatcttcgcg
tgggaaattcgtgacagactgctttcagagggggtctgcacaaacgataatatacccagt
gtaagttcattgagtgtgtcatcgataaacagagtactgcgcaacctggctagcgaaaag
caacagatgggcgcagatggcatgtatgagaagttgagaatgctgaacggtcagactggg
acgtgggggacccggccgggctggtaccccggaacctcagtgccaggacagcccaacaca
gatggctgcccacagtcagacggtggaggtgagaacactaattcaataagttcgaatgga
gaagactcggatgagactcaaatgagacttcagctcaaaagaaaactgcaaaggaaccgc
acttcgttcacacaagaacagatagaagcgcttgagaaagagtttgaaagaactcactat
ccagatgttttcgcaagggaaagacttgctgcaaaaattgacctcccagaggccagaata
caggtgtggttttcaaatagaagggcaaagtggaggagagaagagaaactccggaatcaa
aggcggcaagccagtaactcctccagtcacatccctatcagcagcagtttcagcaccagt
gtctaccagcccatcccacagcccacgacaccaggttggatatcgttctcgtcaggatcc
atgttgggaagaccagacacagcccttacaaacacatacagtgccctgccacctatgcca
agcttcaccatggccaacaacctgcctatgcaagctcctgtgcccagccagacctcctac
tcctgcatgctgcccaccagtccctcagtcaatgggcggagctacgacacgtacacccct
cctcatatgcaggcacatatgaacagccagtcaatggcaggctcaggaggcaactcaaca
ggtctcatctctcctggagtatctgttcccgttcaagtcccaggcagtgaagcagacatg
tcccagtactggcccaggctacagtag
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