KEGG   Salmo trutta (river trout): 115152277
Entry
115152277         CDS       T08542                                 
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
  KO
K14307  nucleoporin p58/p45
Organism
stru  Salmo trutta (river trout)
Pathway
stru03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115152277 (nup58)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115152277 (nup58)
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115152277 (nup58)
SSDB
Motif
Pfam: Nucleoporin_FG2 FapA Nup49_C Tox-ODYAM1 PSY3 JAKMIP_CC3 PBC
Other DBs
NCBI-GeneID: 115152277
NCBI-ProteinID: XP_029552860
Ensembl: ENSSTUG00000046714
LinkDB
Position
2:17273437..17285900
AA seq 634 aa
MSGFNFGSGAIGSTNAGGGFSFGAAASTPAAAGTGGFTLGGALGATAPASTTTTSSLGLG
VSLFSQKPTGGFSFNTPASGAAALTQGLTLGAPAASTAPTTGFSMTFNKPSASAQPFSLT
AASSAPTGAGLTLGSVLTSTAPQQGATGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTG
LSQSTLGGLGFALGLYGCQTNICMVVFVRVSVFICVNVCLFSGLGQTTLGSGGLTLGSLA
STSTAVSAAPSLGLGGVDFSTSSEKKSDKSSGASPQDSKALKDENLPPVICQDVDNFQKF
VKEQKQVHEEISRMSSKAMLKVQDDIKSLKQLLSVSASGLQRNALAIDKLKMETAQELKN
ADIALRTQKTPPGLQHDNTAPYDYFRCLVEQFEVQLQQYRQQIEELENHLTTQGSGSHIT
PQDLSLAMQKLYQTFVALAAQLQSVHENVKTLKQQYLGYRRAFLKDSTDVFESKRVASKK
WQSAPRITTGPAPFSSVPNAAAVAMAATLSQQQQPGPGSQASLGSGLGNPFALGVGSSLG
TSGLGVFGGGPGFGGVATGGSSFGFSSASKPSGGSLSAGFGSNSSSGFNFSNPGLNASAG
LTFGVSNPPATGFGTGGPLLQLKKPPVGNKRGKR
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgtcaggctttaatttcggatccggggctattggttccaccaatgctggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgggt
ggagctctgggtgctacagccccagcctccaccaccaccacctcttctctgggcctgggc
gtgtcactattctcacaaaaacctactggggggttctcttttaacactcctgcctcagga
gctgctgcactcacccaaggccttacattaggtgcaccagcagcctctacagcccctact
acgggcttcagtatgaccttcaataaaccctctgcctcggcccaacccttctccctcact
gcagcctcctcagcccccacaggggcaggactgacactaggctccgtcctcacctccact
gcaccacagcaaggagccacaggattctctctcaacctagggggtgtggccgcaagtaca
gccccatccacaggtctatcgctgggttccagtatgttctctaacatggctactactggt
ctgagtcagtccactcttggaggactggggtttgcgttaggtttgtatgggtgtcagact
aacatttgcatggttgtgtttgtgcgtgtcagtgtgtttatttgtgttaatgtttgtctg
ttttcaggtttgggccagactactctcggatcaggggggttgacgttaggttccctggcc
tctacctccacagcggtgtcagcggcccccagccttggactgggcggagttgacttcagc
acctcctcagagaagaaaagtgacaaatcatcaggggccagcccacaagacagtaaagct
ttgaaagatgaaaatttgcctccagtcatctgtcaggatgtagacaacttccagaagttt
gtgaaggagcagaagcaggttcacgaggagatcagcaggatgtcatctaaagccatgctg
aaggttcaggacgacatcaagagtctcaaacagctgctgtctgtcagcgcctcgggacta
cagagaaacgccctggctatagacaaactgaagatggagactgcacaggagttgaagaat
gcagacatagctctgcggactcagaagactccccctggactccaacacgacaacacagct
ccgtatgattatttccggtgtttagtggaacagtttgaggtccagttgcagcagtacaga
cagcagatagaggaactggagaatcacctcactacacagggcagtggatcacacatcaca
ccacaggatttgtcactggccatgcagaagttgtaccagacttttgtggctctggctgct
cagctccagtcagtacacgagaacgtcaagaccctgaagcagcagtacctgggataccgc
cgggccttcctgaaggactccacggatgtcttcgagtccaagcgggtggccagtaagaag
tggcagagtgccccacgcatcaccactggccccgcccccttcagcagcgtccccaatgcg
gcggcggtcgccatggcagccacgctgagccagcagcagcagcccggcccagggagccag
gcgtccctggggtctggcttgggaaacccctttgccttgggagtgggctctagcttgggc
acctcaggcctcggagtgtttggtgggggtccaggtttcgggggggtagcgacggggggc
tcctcatttggtttctcctccgccagcaagccctcgggagggagcctgagtgcaggtttt
ggaagcaacagtagttcagggtttaacttcagtaaccccggcctcaacgcgtctgcaggc
ctgacgtttggcgtgtccaaccctcccgccacgggcttcggcactggaggtccactgctg
cagctcaagaagcccccggtgggaaacaagaggggcaagagatag

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