Salmo trutta (river trout): 115152277
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Entry
115152277 CDS
T08542
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115152277 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115152277 (nup58)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115152277 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
Tox-ODYAM1
PSY3
JAKMIP_CC3
PBC
Motif
Other DBs
NCBI-GeneID:
115152277
NCBI-ProteinID:
XP_029552860
Ensembl:
ENSSTUG00000046714
LinkDB
All DBs
Position
2:17273437..17285900
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AA seq
634 aa
AA seq
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MSGFNFGSGAIGSTNAGGGFSFGAAASTPAAAGTGGFTLGGALGATAPASTTTTSSLGLG
VSLFSQKPTGGFSFNTPASGAAALTQGLTLGAPAASTAPTTGFSMTFNKPSASAQPFSLT
AASSAPTGAGLTLGSVLTSTAPQQGATGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTG
LSQSTLGGLGFALGLYGCQTNICMVVFVRVSVFICVNVCLFSGLGQTTLGSGGLTLGSLA
STSTAVSAAPSLGLGGVDFSTSSEKKSDKSSGASPQDSKALKDENLPPVICQDVDNFQKF
VKEQKQVHEEISRMSSKAMLKVQDDIKSLKQLLSVSASGLQRNALAIDKLKMETAQELKN
ADIALRTQKTPPGLQHDNTAPYDYFRCLVEQFEVQLQQYRQQIEELENHLTTQGSGSHIT
PQDLSLAMQKLYQTFVALAAQLQSVHENVKTLKQQYLGYRRAFLKDSTDVFESKRVASKK
WQSAPRITTGPAPFSSVPNAAAVAMAATLSQQQQPGPGSQASLGSGLGNPFALGVGSSLG
TSGLGVFGGGPGFGGVATGGSSFGFSSASKPSGGSLSAGFGSNSSSGFNFSNPGLNASAG
LTFGVSNPPATGFGTGGPLLQLKKPPVGNKRGKR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcggatccggggctattggttccaccaatgctggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgggt
ggagctctgggtgctacagccccagcctccaccaccaccacctcttctctgggcctgggc
gtgtcactattctcacaaaaacctactggggggttctcttttaacactcctgcctcagga
gctgctgcactcacccaaggccttacattaggtgcaccagcagcctctacagcccctact
acgggcttcagtatgaccttcaataaaccctctgcctcggcccaacccttctccctcact
gcagcctcctcagcccccacaggggcaggactgacactaggctccgtcctcacctccact
gcaccacagcaaggagccacaggattctctctcaacctagggggtgtggccgcaagtaca
gccccatccacaggtctatcgctgggttccagtatgttctctaacatggctactactggt
ctgagtcagtccactcttggaggactggggtttgcgttaggtttgtatgggtgtcagact
aacatttgcatggttgtgtttgtgcgtgtcagtgtgtttatttgtgttaatgtttgtctg
ttttcaggtttgggccagactactctcggatcaggggggttgacgttaggttccctggcc
tctacctccacagcggtgtcagcggcccccagccttggactgggcggagttgacttcagc
acctcctcagagaagaaaagtgacaaatcatcaggggccagcccacaagacagtaaagct
ttgaaagatgaaaatttgcctccagtcatctgtcaggatgtagacaacttccagaagttt
gtgaaggagcagaagcaggttcacgaggagatcagcaggatgtcatctaaagccatgctg
aaggttcaggacgacatcaagagtctcaaacagctgctgtctgtcagcgcctcgggacta
cagagaaacgccctggctatagacaaactgaagatggagactgcacaggagttgaagaat
gcagacatagctctgcggactcagaagactccccctggactccaacacgacaacacagct
ccgtatgattatttccggtgtttagtggaacagtttgaggtccagttgcagcagtacaga
cagcagatagaggaactggagaatcacctcactacacagggcagtggatcacacatcaca
ccacaggatttgtcactggccatgcagaagttgtaccagacttttgtggctctggctgct
cagctccagtcagtacacgagaacgtcaagaccctgaagcagcagtacctgggataccgc
cgggccttcctgaaggactccacggatgtcttcgagtccaagcgggtggccagtaagaag
tggcagagtgccccacgcatcaccactggccccgcccccttcagcagcgtccccaatgcg
gcggcggtcgccatggcagccacgctgagccagcagcagcagcccggcccagggagccag
gcgtccctggggtctggcttgggaaacccctttgccttgggagtgggctctagcttgggc
acctcaggcctcggagtgtttggtgggggtccaggtttcgggggggtagcgacggggggc
tcctcatttggtttctcctccgccagcaagccctcgggagggagcctgagtgcaggtttt
ggaagcaacagtagttcagggtttaacttcagtaaccccggcctcaacgcgtctgcaggc
ctgacgtttggcgtgtccaaccctcccgccacgggcttcggcactggaggtccactgctg
cagctcaagaagcccccggtgggaaacaagaggggcaagagatag
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