Salmo trutta (river trout): 115152300
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Entry
115152300 CDS
T08542
Name
(RefSeq) iroquois-class homeodomain protein IRX-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115152300
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115152300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
115152300
NCBI-ProteinID:
XP_029552911
Ensembl:
ENSSTUG00000003101
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Position
17:complement(46394169..46397563)
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AA seq
448 aa
AA seq
DB search
MAYPQGFLFQPSVSLALHSCPPFSSSVILGGPRTEELGRSSSGSAFAPYAGSPAFNGSSP
GFNSHLQYSAEQTAALNSFVGSAYDPSAGIAGSLEYHPFGVALGYPYGDPAYRKNATRDA
TATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNR
SEDEEEDDNIDLEKNDDDEEPLKPTAEIGSKNVAVGQHPNPVGFPCEKYKEDNCGNDMEP
VLIDPNVKDHGDRRVPEMPRPTTAASPQNADLGVERDSDSAASESPPRRNDSGNSSNATS
VIHSALPAPKPKLWSLAEIATSSDKCKGCSDASQTVPRQLRTEIPGGRPMTSPLRDAPQN
LFPHSAALSRHVYYTSPFFQGYSNYHGTFGHLQSPGSNVGPATHLNGLHQTMLHRAEALA
RDSQARSQTQIDICKDLRYERKKGMTHV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcctcaaggctttctcttccaaccgtcggtgtctctagctctccattcctgt
cccccgttcagttccagtgtgattttaggaggaccaaggactgaggaactgggccggtcg
tcttcaggctcagccttcgccccatacgcgggatcaccggcattcaatggttcgtcccct
ggcttcaattctcacctccagtatagcgcagagcagacggcggcactgaactcatttgtg
ggttccgcgtacgatccctcagcgggtatcgctggctctttagagtatcacccgttcggt
gttgcattgggctatccatatggagaccctgcatacaggaaaaatgctacaagagatgcg
actgccactctcaaagcgtggctcaatgaacaccgtaaaaacccctacccaaccaagggt
gagaagatcatgctggccatcattactaagatgacccttacccaagtgtccacctggttc
gccaacgccagacggcggttgaagaaagagaataaaatgacgtggaccccgaggaataga
agtgaggatgaggaagaagatgacaacattgacctggagaagaatgacgacgacgaagag
ccacttaagcccacggcagaaattgggtcgaaaaatgtagcagttgggcagcatccaaat
ccagtgggattcccctgtgagaaatacaaagaggacaattgcggcaatgacatggaacct
gtcttaattgatccgaatgtaaaggaccacggggacaggagagtgcccgagatgccacgg
cccaccaccgcagcatctccccaaaacgcggaccttggagtggaaagggattcagactcg
gcagcctcggaaagtccaccgaggcgtaatgactcaggcaactccagcaatgccacatca
gtgattcactcggctcttccggccccgaaaccaaaactgtggtcgctcgcggagattgca
acttcttcggataaatgtaaaggatgtagtgatgcctctcagaccgtgcccagacaatta
cgtacagagattccgggcggtaggcctatgacatctccattgcgagacgctcctcagaat
cttttccctcacagtgcagccctatccagacatgtctattatacgtctccctttttccag
ggttactcgaactatcatggcacttttggacacctgcagagtcccggatccaacgtgggg
ccagcgacacatttaaatggattacatcaaactatgttacacagagccgaggctctggca
agagacagccaagccaggagccaaacacagatagatatttgtaaagacttgagatatgaa
cgtaagaaaggtatgacacatgtctag
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