Salmo trutta (river trout): 115152363
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Entry
115152363 CDS
T08542
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115152363
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115152363
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
115152363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
115152363
NCBI-ProteinID:
XP_029553015
Ensembl:
ENSSTUG00000031557
LinkDB
All DBs
Position
17:complement(51032921..51248751)
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AA seq
921 aa
AA seq
DB search
MDNDLCMVKDDSNFDHSDVGVCKKGCRLLLQTDIVQGDHCCLDALRMLNDALQERSVTLE
HEARMQRLRWVRREQSLLAQVSSLQSEAQLSALRYQRKLHQFMLNINNIAKQVIGHYKSD
SGASGVCLSQLSEQGPTDALDGLQDQEEHGLVPEVNGKDLSKASHDEAVEAFRSAKDPIV
VQVLRRNTAGRGSHVSSTQEVDVVDVVDMCTQTDITFEHIMALAKLRATTPPVPDICPFL
LSDSCHSLHTMEQDYYEGTADGGRTEEFEYEEVELCRLNSQEKLGLTLCYRTDEEEDMAI
YVSEVGPNSIAARDGRIREGDHILQINGQDVQDREEAVAVLSSEDTRNIVLLVARPEIQL
EEAWLDDEHSEFLEQLKMEMLEEQQREEMELEALQEEQEQPRGTEEDDITATCSSLTQDK
DSELGMSDHNALLTHIQRRLSQCLRDRQDTGHHRLDEEEEEEELEVEEGDRFQQLLELKC
QIRNSGEYDLFYSRHSTIECSLGEPAGGVQHELRMLNEELCSIELECQNIMQAHKLRKGP
GGTQRDQVQQVSPITGRPVPKDQSFLRGSRDSPSRGKLADINERQEKPEKSDKDSSSAYN
TAESSRSTPLAMDRSPEHSLQRRMVTITNQRNLHSSLASLHATASPSPSPSPTQRSLHRA
PIPGKASSPDHSPNRYESDQTALADDERSGNGKVKPQHPPRASQIPYLSPSRSSQHRQPN
TNIPAHAHHYQSYMQLIQQRSAVEYAQSQLSLLSVVKEPQLIPTNEPKMEWKVKIRSDGT
RYITKRPIRDKILRERALKIKEERSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQR
RRREFMQRSRLESLRESPQSSSEGRKEVSIIELSHRKMMKKRNKKILDNWMTIQELMTHG
AKTPDDPRAKVHNAFLSVTTV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggataatgatttgtgtatggtaaaagacgactccaactttgaccacagcgacgtgggt
gtctgtaagaaaggatgcagacttctcttgcagacagacatcgtccagggagaccattgc
tgtttagatgcgcttcgtatgctgaacgatgcgctccaggaacggagtgttaccttggag
catgaagcccggatgcagcggctcaggtgggtcaggagagagcagtccctactggcccag
gtgtcatccctccaaagcgaagcgcagctgagtgctctgaggtaccagcgaaagttgcac
caattcatgctgaacatcaacaacatagccaaacaggttattggacattacaagagtgac
tcaggagcttctggagtctgcctgtcccagctatctgaacaaggtccaactgatgcactg
gacggactacaggaccaggaggagcatggcctggtaccagaggtgaatggaaaggacctc
tccaaggccagtcatgacgaggcagtggaggcgttccgctctgctaaggaccccattgtg
gtgcaggtcctcaggaggaacactgctggccgcggcagccatgttagctccactcaggaa
gtggacgtggtggacgtggtggacatgtgcacgcagacagacatcaccttcgaacatatc
atggccctggccaagctccgagccaccactcctcctgtgcctgacatctgcccctttctg
ctgtctgacagctgtcactctctccacaccatggaacaggattactatgaggggacagct
gacggagggaggacagaggagtttgagtatgaggaggtggagctgtgtcgactgaacagt
caggagaagctgggcctgacgttgtgctacaggacagacgaggaggaggacatggctatc
tatgtcagtgaggttgggccaaacagcatcgctgcaagggacggacgcatcagagaagga
gaccacattttacagatcaatggtcaggatgtgcaggacagagaggaggctgtagctgtg
ctctccagtgaagacacaaggaacatcgtactgctggtcgccaggcccgagatacagcta
gaggaggcgtggttggatgatgaacacagtgagttcctggagcagttgaagatggagatg
ttggaggagcagcagagagaagagatggagctggaagcactacaggaggaacaggagcag
cccagaggaacagaagaggatgacatcactgccacctgttcctccctaactcaggacaag
gacagtgaactggggatgtctgaccacaatgcccttctaacccacatccagagacgactg
tcccagtgcctgagggatagacaggacactggacatcatcgtctggatgaagaagaggag
gaagaggagttggaggtggaggagggtgaccgcttccagcagctcctggagctgaagtgt
cagatccgtaacagcggggagtacgacctgttctacagcagacacagcaccatcgagtgt
agtctgggagagccggctggcggtgtgcagcatgagctccgcatgctcaacgaggagctc
tgcagcattgagcttgagtgccagaacatcatgcaggcccacaagctccgcaagggaccg
ggggggacccagagagaccaggtgcagcaggtgtctcccataaccggccgccccgtaccc
aaggaccaaagcttcctccgaggcagcagggactcgcccagcaggggcaagctggctgac
atcaacgagcgccaagagaaaccggagaagtcagacaaggacagctcgagcgcctacaac
acggcggagagctcgcgcagcacgccgctggccatggaccgctcccccgagcactccctc
cagaggaggatggtcaccatcaccaaccagaggaacctccacagcagcctggcaagcctt
catgccacagccagccccagtcctagccccagcccaacacaacggtcgctccaccgagcc
cccatcccaggcaaggccagtagccccgaccacagccccaaccgctatgagtcggaccag
actgccctggcagacgatgaaaggagtgggaacgggaaagtgaagcctcagcatcctccc
agggcttcccagatcccttacctctccccgtcccgtagctcccagcataggcagcccaac
accaacatcccggcacacgcccaccactaccagagctacatgcagctgatccagcagcgc
tcggctgtggagtacgctcagagccagctcagcctgctcagcgtggtcaaggagccccag
ttgatccccaccaacgagcccaagatggagtggaaggtcaagatccgttcagatggcacg
cgctacatcacaaagagacccatcagggacaagatcctgcgggaacgcgccctcaagatc
aaggaggagcgcagcggcgggatgaccacggacgacgacgctatgtctgagatgaagatg
gggcggtactggagtaaagaggagaggaagcagcatctggtcagggctaaagaacagcgg
aggagacgggagttcatgcagcggagtaggctggaaagcctgagggagagtcctcagagc
agcagcgaaggacgcaaggaggtcagcatcatcgaactgagccacaggaagatgatgaag
aagcgcaacaagaagatcctggacaactggatgaccattcaggaactgatgactcatggg
gccaaaacccctgatgaccccagggccaaagtacataacgccttcctgtcggtcaccact
gtataa
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