Salmo trutta (river trout): 115152370
Help
Entry
115152370 CDS
T08542
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
stru
Salmo trutta (river trout)
Pathway
stru04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
115152370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115152370
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115152370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
115152370
NCBI-ProteinID:
XP_029553039
LinkDB
All DBs
Position
17:complement(51634773..51701826)
Genome browser
AA seq
523 aa
AA seq
DB search
MDDDFDQRMELRRQRREQMRLEAEKGFSTTDDDEEVARERRRNAREERMKKAEMEESSSG
TVTTEVNNTHSVTETESYSTGAEVSSSAGDGDDVVLLDRLAKREERRQKRLKEALDRQKE
FDPTITDGNENSQEETFSSGRHQGTEEEKEEKPAQEEVTTNSWSREEEEVKEEEATPKEE
DPKRVTEPEKAEEVEEEKKEEEKSKKREAEKVELEKPKLRSVKKDEKESSLSKQQNGGVA
RSTEAEDQERLEAERKLEELKRRRDEADSEEFEKMKQKQQESEAELEELKKKREGRKKII
EEEEKQKKAEMAEKKAKEQEERKRLKEEIEQRRKDAAEKKKQMIEESGDGDKKPFTLGVT
PKGKIGERAEFLNQRAQKGCKTSHAPIVSKIGNRLELYTAAVQTNRDVRSPKSPVSDLPE
TPSIRNIKSMWEKGNIGGATESPKPMNKDAADIKVGVAGLTKGWGKSPADTGKAAAAAAE
KADDLKPVDVGNKRSLWETKGSSPAKVTVGGKNKSVTNAGVGR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgactttgaccagcgcatggaattgaggaggcagaggcgtgagcaaatgcgt
ctagaggcagagaagggcttcagcacaactgatgatgatgaggaggtggctcgcgagcgt
aggaggaatgctcgtgaggaacgaatgaaaaaggcggagatggaggagtctagcagcggc
accgtgacaacagaggtcaacaacactcacagtgtgacagagacagagtcctactccacc
ggtgcagaggtgagctcctcagcaggtgatggggatgacgtggtactcctggaccgcctg
gccaagcgggaggaacgcagacagaagaggttgaaagaggcactggatagacagaaggag
ttcgaccctaccatcaccgatggtaatgagaacagccaagaggagaccttctctagcggc
cgccaccaaggcacagaggaggagaaggaggagaaaccagcccaggaggaagtaaccacc
aactcctggagtagagaggaggaggaggtgaaagaagaggaggccacgccaaaggaggaa
gaccctaaacgcgtcacagagcctgagaaagctgaggaggtggaggaagagaagaaagag
gaggaaaagtcaaaaaagcgggaggctgagaaggtggagttggagaaaccgaagttaaga
tcagtgaagaaagacgagaaggagtcctccctctccaagcagcagaacggaggtgtggcg
cgctccaccgaggccgaggaccaggagcgcctggaggcggagcgtaagctggaggagctg
aagcggcgtcgtgacgaggcggacagcgaggagtttgagaagatgaagcagaaacagcag
gagtctgaggccgagctggaggagctgaagaagaagagggaggggaggaagaagattatt
gaggaggaagagaagcagaagaaggcagagatggcagaaaagaaggccaaggagcaggag
gagaggaagaggttgaaggaagagatagagcaaagaagaaaagacgctgcagagaagaag
aaacagatgatcgaggaatcgggtgacggagacaagaaacccttcacattgggtgtcacg
cccaagggcaagattggggagagagcggaattcttgaaccagagagcccagaaaggctgt
aagacatcacacgctcctattgtctccaagataggcaacagactggaactatacactgct
gcagttcagaccaaccgggacgtgaggtctcctaagtctccagtctcagacctgccagag
acaccaagcatccgcaacatcaagagcatgtgggagaaagggaacattgggggggccact
gagagccccaagcctatgaataaggatgctgctgatattaaagtgggtgtggctggactg
actaaaggctggggcaagagcccagcagacactggcaaggcagctgcagccgcagctgag
aaggctgacgacctgaaacctgttgatgtgggcaacaagcgcagcctatgggaaacaaag
ggctcctcccctgctaaggtgacagttggaggcaagaacaaatctgtcacaaatgcaggt
gtgggacgctaa
DBGET
integrated database retrieval system
