Salmo trutta (river trout): 115152423
Help
Entry
115152423 CDS
T08542
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1-like isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115152423
04137 Mitophagy - animal
115152423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115152423
03029 Mitochondrial biogenesis [BR:
stru03029
]
115152423
Membrane trafficking [BR:
stru04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
115152423
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
115152423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
DUF6274
Motif
Other DBs
NCBI-GeneID:
115152423
NCBI-ProteinID:
XP_029553150
Ensembl:
ENSSTUG00000039627
LinkDB
All DBs
Position
17:complement(53858987..53913790)
Genome browser
AA seq
1521 aa
AA seq
DB search
MSSKEALSLKPLHGELAAAEVTLPRAGREQWCGPGLYRRRTMASRHQRNSVRILSTRERG
SQAFGSQRLLQQMVEEKVRWMKWQSQKVELPDSPRSTFLLAFSPDRTLMASTHVNHNIYI
TEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVRIWDLHGGSESWFTESNVA
IASLTFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSETERVRLVRFDPLGHNLLTAI
VNPSNQQNDDDSEVPMDSVEMPHFRQRSFLPSQPVRRTPILHNFLHILSSRSSGAQAGGD
ASRPGGEDSGEPPSMPLGQYPASQDLGLPYPGCTQHLGMVCLCSRCMANRSPSLGEGPST
SRPVVHPELPQVASQPAPHASTFSARTEPRQPSEPTGAQQRPSAFTTVYYSAGSSLHRAV
PTTHVASQPLSQQLLPTPANHQHQPPSRPLPGPDWTCSLLNMRSSESGAGSGGSSGGGMG
GVGGGMLPPRTSSSSVSLLSVLRQQDGSSQSPVYTSATEGRGFPPQPGAELGSSPVANQR
GGSGGGGGGVGSSSGHHPFWDGTRSNPASFRNVLQCNLSRYFMEFDRMQDLELPLGAASV
DVGGGEGGQEQMQELLNNNIDPERPGPSVSSHYQPQPPPPAPTENNPPPFSSAAHSSRGH
LNRCRACHNLLTFNHDSQRWERTSPASSTSAVSTQEGSSSPWRQPPSLAYEEPHASSRSR
DPHPQPQERERRVVQPPEPSELQPSPGPDVAAMPFPTIASSSAQPGEQTVGLVFNQETGQ
WERVYRQAASSRSADAPPEAFSQEMPVDNPDEDSLRRRLLESSLLSLSRYDMGGSRDHPI
YPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRTLSSSSDSPAGNPSAAIENS
DLDFEELDDNGDRTRHRTPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATH
SSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVPNCKIYND
ASCDISADGQLLAVFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPM
GCYVMVGLASRRILLHPSTDHMVAQVFRLQQPHGGETSIRMVFNVVYPMAPDQRRHVSIN
SARWLPDPGMGLAYGTNKGDLVICRPVLYRSDGESPAEASTEPIFTVNNSGGGTSRTRGT
DRPGAPSRSSWRLDRDMGLMNAIGLQPRHPAPSVTSQGTQTPIVQLQNAETQTEMDLSGP
STSHAAAYVEARPEVPSTSRETQGGLEQPQTRRTEASAMGDSSTEAGTSTANTGEAPEYA
PGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRGSQTRTGAAAWL
PSNSDPNLPVAGHSTASISTSSACPLTITQPQPSQTLHLSLENSSAPTEPGPVWGLPFVS
QPQPPSLASGAGAGLSVAMDIDNVFEVASRMDNSEPGPSSSLIFSSSSSSSRRSYPPSSG
TNGNDNNSSSRDSYPGDPYSR
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaagaggcactgagtttgaagcctctgcatggcgagctagcagcagcagaa
gtgactctccctagagcaggcagagagcagtggtgtggccccggcctgtacaggaggaga
accatggcctctcgtcatcaaaggaactctgtgcggatcctgtccacccgggagcgcggc
tcgcaggcctttggctcccagcgcctcctgcagcagatggtggaggaaaaggtccgctgg
atgaaatggcagagtcagaaagtagagctgccagatagccctcgctccacgttcctgttg
gccttcagcccagaccggaccctcatggcttccactcacgtcaaccacaacatctacatc
acggaggtgaagactggaaagtgcctgcattcgctggtgggccaccgccgtacaccctgg
tgcgtgacctttcaccccaccatccccggcctggtggcctccgggtgccttgacggagag
gtccgcatctgggacctacatggtggcagtgagagctggttcacagagagcaacgttgcc
attgcctcgcttaccttccaccccaccgcccagctcctcctcatcgccaccaacaatgag
ctacacttctgggactggagtcggcccgagcccttcgccgtggtcaaaaccggcagcgag
actgaaagagtcaggttggtgaggtttgatcctttggggcacaatcttctgacggctatt
gtgaacccctccaaccagcagaatgatgatgactccgaggtccccatggacagtgtggag
atgccccacttccgccagcgctccttcctgccctcccagcctgtacgccgcacgccaatc
ctccacaacttcctgcacatcctgtcatcgcgctcgtcgggggcgcaggctgggggggat
gcgtcccgccctggcggggaggacagcggcgagccccccagcatgcctttgggccagtac
ccagcctcgcaggaccttggactgccctacccaggttgcacccagcacctgggcatggtg
tgcctctgcagccgctgcatggccaaccgcagcccctctctgggggagggtccctccacc
tccaggcctgttgtccaccccgagcttccccaggtggcctctcagccagccccccacgcc
tccaccttttcggcccgtacggagccccggcagccttcagagcccactggagcccagcag
cggccctcagccttcaccacagtctactacagtgccggcagctccctgcaccgcgccgtg
cctaccacccacgtggccagccagcccctgagccagcagctgttgcctacgcccgccaac
caccaacaccaacccccatcccgccctctgcccggacctgactggacatgcagcctgcta
aacatgagaagctcagagagtggggccggaagtggggggagcagtggagggggtatgggt
ggtgttgggggtgggatgctgcccccccggaccagctcgtcctctgtcagcctgctgtca
gtgctgcggcagcaagacggctcctcccagtcccccgtctacacttctgccactgaggga
cgaggcttccccccgcagccgggtgccgaacttggctccagccctgtggccaatcagaga
ggaggaagtggtggtggaggaggaggggtgggttccagcagtgggcaccaccctttctgg
gatggcacgcgcagcaacccggcctcgttccgcaatgtgctccagtgcaatcttagccgc
tacttcatggagttcgaccgcatgcaggacctggagttgccgctgggggctgccagcgtg
gatgtcgggggaggggagggcggccaggagcagatgcaggagctgctcaacaacaacata
gacccagagagacccgggccctccgtgtcctcccactaccagccccagccacccccacct
gcccctaccgagaacaacccccctcccttctctagcgccgcccactcctcccggggccac
ctgaaccgctgccgggcctgccacaacctgctcaccttcaaccacgactcccaacgctgg
gagcgcaccagcccagcctcctccacctccgctgtctccacgcaggagggctccagctct
ccctggcggcagccccccagccttgcctatgaggagccccatgcatcatcacggagccgg
gatccacacccccaaccccaagagagggagaggagggtagtccaaccccctgagcccagc
gagctacagccctccccaggccctgacgttgcggccatgcccttccccaccattgcgtcg
tcctctgcccagcctggggagcagacagtgggcctggtgttcaaccaggagacgggccag
tgggagcgcgtctatcgccaggccgcctccagccgctccgccgacgcaccgccagaggcc
tttagccaggaaatgcctgtagataacccggatgaggactctctgagaagaaggctgttg
gagtcctccctcctctctctctcccgctacgacatgggaggatcccgagaccaccctatc
tacccagaccccgccaggttatccccggctgcgtactatgcccagaggatgatccagtac
ctgtcaaggcgggatagtattcgccagcgctcgctgcgctaccagcagaaccggctgagg
acactctcctcctcgtcggacagccctgccggcaacccttcggccgccattgagaacagc
gacttggactttgaggagctagatgataacggcgacaggacgaggcacagaacaccgcgc
aacgccaggatgtctgctccttcgctggggcgcttcgttccccggcggttcctgttgcct
gagtatctgccctacgctgggatcttccacgagaggggacagcctggccttgccactcac
tcctctgtcaacagggtcttagcaggtgcctccatcggggacggccagtcggcggtggct
agtaacatagccaacaccacctaccggctgcagtggtgggacttcaccaaattcgacctg
cctgagatcagcaacgcctctgtgaatgtgctggtgccaaactgtaagatatacaacgac
gccagttgtgacatctcagcggacgggcagctcctggccgtgttcatacccagcagccag
cggggcttccctgacgagggcatcctggccgtgtactccctggcccctcacaacctgggg
gagatgctctacaccaagagatttggtcccaatgccatctcggtgagcctgtctcccatg
ggctgctacgtgatggtgggcctagcatctcgcaggatcctgctacatccctccactgac
cacatggtggcgcaagtgttccggctgcagcaaccccacggcggcgagacctccatcagg
atggtgtttaatgtggtgtaccccatggctccggaccagcggcggcacgtcagcatcaat
tcagccagatggcttccagacccggggatgggcctggcctacgggaccaacaaaggggac
ttggtcatctgcaggcctgtgttgtaccggagtgacggagagagcccggccgaagcgagc
accgagcccatattcacagtcaacaacagtggtggtggaacaagcaggacccgtggtaca
gatcgaccaggggcccccagtcgctccagctggagacttgacagagacatgggtctgatg
aacgccattggcctccagccccgacaccccgccccctcggtgacttcacagggcactcag
acgcccatcgtgcagctgcagaacgccgagacgcagacagagatggacctctccgggccc
agcacctcccacgctgctgcttatgtagaagcccgtccagaggtcccgtccacaagccgt
gagacccagggaggtctggagcagccgcaaaccaggcggactgaggccagtgccatgggg
gactcttcaacagaagccggcacctccacagccaacaccggcgaggccccagagtatgcc
ccgggagaggacgccctggcgcggatccgccggctcatcgcagagggcggcatgacggcg
gtggtccagcgggagcagagcaccaccatggcctccatgggcggcttcggcaacaacatt
atcgtcagccatcgcatccaccgcggctcccagacccggaccggcgccgcagcctggctg
cccagcaacagtgaccccaacctgcccgtcgccggccactctacagcctccatttccacc
tcctccgcctgccccctcactatcacccagcctcagccttcccagaccttgcatctcagc
ctggagaactcgtccgctcccacagaaccaggcccggtgtgggggctgccctttgtctcc
caaccacaaccccccagccttgcttcaggtgcgggggccgggctctcagtggccatggac
atcgacaacgtgtttgaagtagccagccgaatggacaattctgagccaggcccctcttcc
tccctgatcttctcctcctcttcctcctcctctcgcaggtcctaccctcccagcagtggc
acaaacggcaacgataacaacagcagcagcagagatagttacccaggtgacccttacagc
aggtag
DBGET
integrated database retrieval system
