Salmo trutta (river trout): 115152662
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Entry
115152662 CDS
T08542
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115152662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115152662
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115152662
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Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_2
Vps4_C
AAA_5
AAA_14
Motif
Other DBs
NCBI-GeneID:
115152662
NCBI-ProteinID:
XP_029553269
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Position
18:30584982..30596335
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AA seq
604 aa
AA seq
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MYDYSKRWHDTMKNRGGFGRVDNRLKQKVEQEMELPLLKVSAPELVSGVSGESELKLREL
FEQAVTSSPCILFINEVDAITPEREVASKDMERRIVAQLLTCMDDLNSLAVTAQVMVIGA
TNRPDSLDPALRRAGRFDKEICLGIPDEAARLRILKTFCRKLKLPEDFDYRQLARLTPGY
VGADLMALCREAAMSTINRVLLEMQDKNQGLVPKAEGRGESERPQGACPLPQGPEAQEGV
GDESWQALADTQSQEMTDLSIVPPRDEQQPLATETIFRSEEQMAGLCILMSDFQGSLASV
QPSAKREGFATVPDVTWEDLHDIREELTMAILAPVRSPEQFKALGLSAPAGVLLAVPPGC
GKTLLAGQVYRFLLFQAVANESGVNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCV
IFFDEIDSLCPRRSGHESGASVRVVNQLLTEMDGLEVRRQVFIMAAAKRTRWTSDIIDPA
VLRPGRLDKTLYVGLPPPSDRHAILLTITRGGSKPHLEQDVSLEEIAHDVRSDCFTGADL
SALVREASVNALRAYLLTQPNPTQPILHRVSKQNFEDAFKKVRPSVSKKDQHMYEQLKES
LMRI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtacgattattccaaaaggtggcatgacacaatgaagaatagaggtggcttcggcaga
gtggacaaccgactcaaacagaaagttgagcaggaaatggagttgcccttgctgaaggtg
tctgcgccagagctggtatctggggtgtcaggggagtctgagctgaagctgagagagctg
tttgagcaggctgtgaccagctccccctgcatcctgttcattaatgaggttgatgccatc
actcctgagagagaggtggcatctaaggacatggagagacggattgttgctcagctgctc
acttgcatggatgacctgaactctttagctgtcacagcacaggtgatggttattggtgcc
accaatcggccagactctctggacccagcgctgcgccgggctggacgctttgacaaagaa
atctgtctggggatacctgacgaagcagctcgtctcagaattctgaagaccttttgtcgg
aagctgaagctccctgaggactttgactaccggcagctggcccgtctgacccctgggtac
gtgggagctgacctcatggcgctatgccgcgaggccgccatgagcaccatcaacagggtc
ctgctggagatgcaggacaagaaccaggggctggtccccaaggcggaggggagaggagag
tcagaacggcctcagggcgcatgtcctctcccacagggcccagaggcccaggagggagta
ggtgatgagagctggcaggctttagcagacacacaaagtcaggagatgacagacctaagc
atcgtaccaccgagagatgagcagcagcctctggccacagagacaatcttcaggtctgag
gaacagatggctggcctgtgcatcctcatgtcagacttccagggctcactggccagcgta
cagccctccgccaagcgcgaaggctttgccacggtgccagacgtcacctgggaggacctg
catgacatccgcgaagagctcaccatggccatcctggcccctgttcgttcccctgagcag
ttcaaagccctgggtctcagtgctcctgcaggggtgttgctagctgtgcctccaggctgt
ggaaagaccttgctggctggccaagtataccgttttctcttatttcaggctgttgccaat
gagtctggagttaacttcatctctgtcaaggggccagagttgctgaacatgtatgtggga
gagagcgagcgggctgtgcgacaggtgttccagagaggacggaactctgccccttgtgtc
atctttttcgatgagattgactcactgtgcccccgccgctccgggcatgagtctggagcc
agtgtccgtgtggtcaaccagctgcttactgagatggacggactggaggtcaggcggcag
gtcttcattatggcggctgccaaacggaccaggtggacgtctgatattattgaccctgct
gtgctgagaccaggccgtctggacaagaccctgtatgtgggcctcccacctccgtcagac
cgacacgccatcttactcaccatcaccagggggggaagcaaacctcatctggagcaggac
gtgagtctggaagagatagcccatgacgtgcgcagtgactgcttcactggggcagacctg
tctgcgttggtgagggaagcctctgtcaatgctctgagagcctacctcctgacccaaccc
aacccaacccaacccatcttacacagggtcagcaagcagaactttgaggacgccttcaag
aaggtacggccgtctgtgtctaaaaaggaccagcatatgtatgagcagctaaaggaatct
ctcatgaggatttga
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