Salmo trutta (river trout): 115152787
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Entry
115152787 CDS
T08542
Name
(RefSeq) probable lysosomal cobalamin transporter
KO
K14617
LMBR1 domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04977
Vitamin digestion and absorption
stru04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
115152787
04980 Cobalamin transport and metabolism
115152787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115152787
Membrane trafficking [BR:
stru04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
115152787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Wbp11
TgpA_N
T4SS_pilin
PqiA
Motif
Other DBs
NCBI-GeneID:
115152787
NCBI-ProteinID:
XP_029553441
Ensembl:
ENSSTUG00000020101
LinkDB
All DBs
Position
18:complement(5667374..5848672)
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AA seq
535 aa
AA seq
DB search
MADQSLLSESALGWSIFALVFLVILSFCWVYIRKYQSRQESEVISTITAICALAIALITS
ALLPVDIFLVSYMKHPNGTYKEWAESNETRGQIEDTVLYAYYSLYSILLFCVFLWIPFVY
FYYEEKDDDNINKCSQVKNALKYTIGFIIVCAALLLIGAFLPLEAPPNQNGTQWEKMQYL
FEELGNNHGVPALSFSISSLTLIGMLAVITYTAYGMSVLPLNLIKGTRSVVYERLENTED
IEEVENQMEKIKAKCEDGRPLSSRDRRNLQEFEDKLQVLQRRGRHLEIAESHCCTKVGSA
LRPLKILLGIFFILFALLFVVALFISNLDKALHSAGITSGFMVFGTNLTNPLNELLLTLQ
PVFPLDYVLITVITMYFVFTSMAGIRNMGIWFFWIRLYKIRPKRTRPQALLFLCMILLLI
VLHTSFMIYSLAPQYVMYGSQNYLLQSPMPPGNNTTWTTKTCDADAPQDECTVTRSYLFL
HKFWFFSTIYYFGNWAFIGVFLIGLLVSCCKGKKSVIEGEVEADDSDMSEDEYVH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagtcgttgctatctgagtctgctctcgggtggtctattttcgcccttgta
tttttggtgatcctgtccttctgttgggtctacatcaggaagtaccagagccgccaagag
agtgaggtcatctcaaccatcactgcaatatgcgcattggccattgcactgataacctct
gcacttcttccagtggatatattcctagtgtcttacatgaagcaccctaacggtacttac
aaggagtgggcagaaagcaatgagacacgaggccaaatcgaagacacggtgctgtatgct
tattactcactgtactctatcctcctgttctgtgtcttcctgtggatcccctttgtctat
ttctattatgaggagaaagatgatgacaacatcaacaagtgttcacaagtgaaaaatgct
ctgaaatacacaattggattcatcatcgtctgtgcagcactgctattaattggggccttt
cttcctcttgaagccccacctaatcagaatggtacccagtgggaaaagatgcagtatctg
tttgaggagctggggaacaaccatggtgtaccagccctgtctttctccatcagctccttg
accttgattggcatgctggcagtgatcacttacacggcgtatggtatgtcagtgctgccg
ttgaacctgattaaaggaacacgcagtgtcgtgtacgagcgtctggagaacactgaagat
attgaagaggttgaaaaccagatggaaaagatcaaagccaagtgtgaggacgggcgtcct
ctgtcgtcgcgggaccgtcgtaacctccaggagtttgaggacaagctacaggtgctccag
aggagaggcaggcacctggagatagcagagagtcactgctgcaccaaggttggatctgct
ctcagaccactcaagattctgctgggaattttcttcatcctgttcgctctgctgtttgtt
gttgctctgttcatttcaaatttggacaaagctcttcactctgctggcatcacttctggc
ttcatggtgtttggcaccaacctgaccaaccctctgaatgaactcctgctgactctacag
cctgtgttcccgttggattatgtcctgatcacggtcatcaccatgtactttgtgttcacc
tccatggccggcatcaggaacatgggcatctggttcttctggatacggctgtacaagatc
agacccaagagaacccgtccccaggccctcctcttcctctgcatgattctactgctgatt
gtccttcacaccagcttcatgatctacagcctggccccgcagtacgtcatgtacgggagc
cagaactacctgctgcagagcccgatgccaccagggaataataccacttggactaccaag
acctgcgatgccgacgcacctcaagacgaatgcactgtgacgagatcgtaccttttcctc
cacaagttctggttcttcagtaccatctactactttggtaactgggcgtttatcggggtt
ttcctcatcggcctgttggtgtcatgttgtaaggggaagaaatcagtgatcgaaggagag
gtggaggcagacgactctgacatgagtgaagacgaatacgtccactga
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