KEGG   Salmo trutta (river trout): 115152816
Entry
115152816         CDS       T08542                                 
Name
(RefSeq) integrin alpha-9-like
  KO
K06585  integrin alpha 9
Organism
stru  Salmo trutta (river trout)
Pathway
stru04510  Focal adhesion
stru04512  ECM-receptor interaction
stru04514  Cell adhesion molecules
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115152816
   04514 Cell adhesion molecules
    115152816
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115152816
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115152816
   04810 Regulation of actin cytoskeleton
    115152816
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:stru04515]
    115152816
Cell adhesion molecules [BR:stru04515]
 Integrins
  Integrin alpha subunits
   115152816
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 Integrin_alpha FG-GAP_2
Other DBs
NCBI-GeneID: 115152816
NCBI-ProteinID: XP_029553516
Ensembl: ENSSTUG00000034021
UniProt: A0A674C3W0
LinkDB
Position
18:9922558..10074475
AA seq 1031 aa
MRQRMGHVLNQKRSLLDVLCVYLSVSVVHSYNIDLEHAVVFRGPDSSFFGYSVLEHYHDN
TRWVLVGAPKANSSYSSSLHTPGAVFKCRVHSNPGRRCTEMNLGRGNKPRESCGKTCQGD
RDDEWMGVSLARQDKPDGKILACAHRWKNVFYDSELILPHGYCSIIPPTLQGRTQALIPC
YEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTVKVYNLTSNTFYNPNKEDI
NSHRYSYLGYAVTTGHFSSPNIIDVAAGAPQHSGGGKIYIFRIDGVSLVKIFQASGTMMG
SYFGSSLCGVDLNRDGLSDLLVGAPMHSTLRDEGQVSIYLSKGNGVMEEAGLLNGDNAYS
AHFGECITAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIVTKYSMRLSGQSINP
ALQMFGQSISGNVDMDSNGYPDITVGAFMADSVVLLRSRPVITVDVSIYLPVSINISVPQ
CHEGPQHLNCFNARVCLLFRGKHLPGQIELLYNLTADVDKRQRSQSSRVYFIQNGGQISL
MSNELSLDINREDCQQYTAYVKKDVKDVFTAITFEVAYTLGKHVVNGHLDKDLPALTPVL
RWRKGDKMAAKNETWFERNCLSDDCAADLRLHGKLLLSGLHVRSHLALGGVRNVSLNVTI
SNAGDDAYDTNIYFNFSRDVFYINYWQKEEKGISCGLVDLDFLQCSVGFPFMRAKTKYHL
AVIFDTSRLSGENETLQFLVHAKSANPEHKLLDNNLDLSIPLVHEVDTAITGLVTPTSFL
YGNSIDASRFVQLEDMECNFQPLNFTFQVINNGPSRLPGSIVDIRIPNRLAGNGADMFHI
LDTQVAEGQGICIPHRNPQPCSIPQDRESIFHTIFAFFTKSGRRVLDCDRPGRACLTISC
TLGSQSKEEVVSIYVKLLLNTEILKRDSSSLIQFVTRGNVRVDGSAIEVPQGLSEDTSLV
FEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRKDRA
DESWDWVEKNH
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgcgccaaaggatgggtcatgttctgaatcagaagaggagccttttggatgttctctgc
gtgtatttgtctgtttctgtagttcactcctacaacattgacttagaacatgctgttgtg
ttccgtggacctgactcgagtttctttggatactctgttctggagcactatcatgacaat
acgcgctgggttctggtaggggcccccaaggccaactcttcctacagcagctcacttcac
accccgggagccgtgttcaagtgccgtgtccacagcaacccaggcagacgctgcacggag
atgaacctgggccgagggaataagccccgggagtcttgtgggaagacgtgccagggagac
agggatgatgagtggatgggggtcagcctcgccaggcaggacaaacccgatggcaaaata
ctggcctgtgcccatcgttggaagaatgtcttctatgactctgagctcatccttccccat
ggttactgttccatcatccctcctacgctacagggccggacacaagccctcatcccctgc
tacgaagactacaagcagaagtatggggaagagcacggctcgtgccaagcggggatagca
ggcgtttttactgaggagctggtggtgatgggagctccaggatcatactactggacagga
acagttaaggtctacaacctgacctccaacaccttctacaaccccaacaaagaagacatc
aactcacacagatacagttatctaggctatgccgtgactactggacacttctcctctcct
aacatcatagatgtggctgcaggagctccacaacacagtggaggagggaaaatttacatt
ttcagaatcgatggtgtgtctttagtgaagatctttcaagcctcagggacaatgatgggc
tcttactttggctcctcgttatgtggagttgacctgaacagggacggcctgtcggacctg
ctggttggagcgcccatgcacagcacgctacgggacgagggacaggtctctatctacctc
agcaagggcaacggtgtgatggaggaagctggactcttaaatggtgataatgcctacagt
gcacactttggagagtgcatcactgcaatcggagacattgatgacgatgggtaccaagat
gtggccataggagcacccaaagaagatgactacggtggagcggtttacatttaccatggt
gatgccacaggaatcgtcaccaaatattctatgagactgtctggacagagcattaacccc
gccctccagatgttcggccaatcaatctctggcaatgtggacatggacagcaatggatat
ccagatattaccgttggtgcttttatggctgatagcgtggtgttattgaggtcccggccg
gtgatcactgtggacgtgtccatctacctgcctgtctccatcaacatctctgttcctcag
tgtcacgagggaccacaacacctcaactgtttcaacgcaagagtctgcctgctcttcaga
ggaaaacacctgccaggacagatagagttgttgtataacctgacagctgatgtggataag
aggcagaggagccagtcttcccgagtgtactttattcagaacggaggccagatcagctta
atgagcaacgagctcagtctggacatcaacagagaggattgccaacagtacactgcatat
gttaagaaggacgtgaaagacgtattcacagccatcacctttgaggtggcctacaccctg
gggaagcatgtggtgaatggtcacctggacaaagacctgcctgctcttacacctgtactg
cgctggaggaaaggagacaagatggcagcaaagaatgagacatggtttgagaggaactgc
ctgtctgatgattgtgctgctgacctgaggctccatgggaaactgctgctttctgggctc
cacgtgcgctcccatctggccctaggaggagtgaggaacgtctctctgaacgtgaccatc
tccaacgcaggggacgatgcctacgacaccaacatctacttcaacttctccagagatgtc
ttctatatcaactactggcagaaggaagagaagggtatttcctgtggtcttgttgattta
gacttcctccaatgcagcgtgggatttcccttcatgagagcaaagactaagtatcatctt
gcagtgatcttcgacacaagtcggctttcaggggaaaatgagacattgcagtttttagtt
catgcaaaaagtgccaaccctgagcataagctgttggacaacaatttggatctgtctatc
ccactcgtccatgaggtggacacagctatcactggtttagtgactccaacatcctttctg
tatgggaactccatcgatgcctctcgattcgtccagctggaggacatggagtgtaacttc
cagcctctaaacttcacctttcaggtgatcaacaacggccccagcaggttacctggctcc
atagtggacatcaggatccccaaccgactggctggcaatggggccgacatgttccacatc
ctggacacacaggtggcggaggggcaagggatctgcatccctcacaggaacccccagccc
tgttccatcccccaggacagagagagtatcttccacaccatctttgccttcttcaccaag
tctggacgcagggtcctggactgtgaccggccagggagagcatgtttaaccatctcatgt
actctgggctcccagtccaaagaggaagttgtcagtatatatgtgaaacttctactaaac
acagagatactgaagagggacagctcatcgctgatccagttcgtgactaggggtaatgtg
agagtggacgggagtgccatagaggtaccgcaggggctatcagaagacacgtcactggtg
ttcgaggcactccacagccaggagccaagaggctatgttgttggttggatcattgccatc
agcctactggtgggaatactcatcttcctactgctggctgtgctgctctggaagatgggt
ttcttccgccggcgctaccgggagatcatcgaggccgagaaaaacaggaaggacagagct
gacgagagctgggattgggtggaaaagaaccactga

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