Salmo trutta (river trout): 115152859
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Entry
115152859 CDS
T08542
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115152859 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115152859 (tbp)
03021 Transcription machinery [BR:
stru03021
]
115152859 (tbp)
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
115152859 (tbp)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115152859 (tbp)
RNA polymerase III system
TFIIIB
115152859 (tbp)
RNA polymerase I system
SL1/TIF-1B
115152859 (tbp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
115152859
NCBI-ProteinID:
XP_029553604
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All DBs
Position
18:complement(13271413..13279204)
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AA seq
300 aa
AA seq
DB search
MEQNNSLPPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVTNTNSLSLLEEQHRQQQQ
QQASTQQGGVSGGSGQTPQLYHSQTVTTTTTLPGNTPLYTATPLTPMTPITPATPASESS
GIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM
VCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQ
FSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacaacagtttgcctcctttccagggtcttgcctcccctcagggggcaatg
acgcctggaatgcccatcttcagccccatgatgccctatggcagtggtctgactccccaa
cctgtgacgaacaccaacagcctgtctctcctggaggagcagcatcggcaacaacagcag
cagcaggcttcgactcagcagggtggggtgtcagggggctcgggacagacgccacagctt
tatcactcccaaacggtcaccaccaccaccacactgccgggaaacacccctctctacacc
gctacaccgctaacccccatgacacccatcacacctgccacacctgcctctgagagctct
gggattgtcccacaactacagaatatcgtatccactgtgaacttgggctgcaaacttgac
ttgaaaacaatagcactccgagctagaaatgctgagtacaatccaaagcgatttgctgct
gttatcatgagaatacgagagccaagaacaactgcacttatcttcagctctgggaaaatg
gtgtgcacaggagccaaaagtgaagagcagtcccgcctggcggccaggaaatatgccaga
gtcgtgcagaagttgggcttcccagccaaattccttgacttcaagatacagaacatggtg
ggcagctgtgatgtcaaattccccattcggttagagggacttgtactaactcaccagcag
ttcagcagttatgaaccggagttgttccctgggctaatctatagaatgatcaaacccaga
attgtcctgttgatattcgtttcaggcaaagttgtattaacaggtgcaaaggtgagagga
gaaatttatgaagcatttgaaaacatctaccccatcttgaaaggattcaggaagacgacg
taa
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integrated database retrieval system