Salmo trutta (river trout): 115152897
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Entry
115152897 CDS
T08542
Name
(RefSeq) uncharacterized protein LOC115152897 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
stru
Salmo trutta (river trout)
Pathway
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115152897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115152897
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115152897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
115152897
NCBI-ProteinID:
XP_029553676
Ensembl:
ENSSTUG00000001550
LinkDB
All DBs
Position
2:19929147..20011794
Genome browser
AA seq
1285 aa
AA seq
DB search
MRPTEKDRDSVVLSGDIILSNSTSGLKSPSLCLPEDSSSIESSEHQLDSLTFDPDDLRVM
TLPHDRDHASSERRSSPTPTSVSYDFDTTSTNSEETEESILPVSGGNTNLHKPMKSKSKG
SQEGRSKSSKFSVFAKMPSFRKGKSLKNAKGEDLPRDSPDLGLSRDMGGGQVGQGGDTSD
DDNVFLKGDILNQTVQQSFSSSLGGHYETEQEDYGFFPSTPRTRHVRLLFRDGPGDTPLT
SQPGGLRHNQTGAPEGLHGYKRSKSSDSLNLRMRFAQAHKSLSSLFESRSMDKENEEEQV
NIETGSEGEVGRAKQSWRRLKRERAKEAELLRRTLSVPVGDGDKGGDGEDGGVRTPRQIH
SDYASRSASVLSVPGSPSSPRALCLTDPLTKRGFQDSHSGAGENTPLGCKSEGQRRKGKV
LPNGLSINFSDSGPASSDDSEAPPTNDSSPLSPMSPASLATLANQLSWSSSRSPGGAFES
TASSMAATPDTPVRPMSPKPHSPRPAAQHRPYRYPHSASARASALSLVLMAQSASVEGLS
DPPEKPKTLKPRAGPLGSSSLSPLEDSGVDSQSQISLLTPMSINQFETQGGCRPTSQAGG
EKRLAELKSPGSGLVTTASALRPSSGHRPNRERDRGPRRHRCSSDDLWIEEEKRRKRKLA
RVVRGSLGQLNTHCPEDLEKARARVSLSTMEAFSGIPLKAHCFSQSTPIGLDCLGWRRRI
SYPSVIVPDGGGEKAGLGLGDDLGSDEDLYEEFRSSGHRCGHPGGGGEQLAINELISDGS
CVYAEALWDHVTMDDQELGFKAGDVIEVVDATNKEWWWGRILDSEGWFPASFVRLRVNQD
EPMEEYLAQLEEAGAGEEDRPGVGLILGPGLPCKDQMRTNVINEIMSTERDYIKHLKDIC
EGYIKQCRKRIDMFTEEQLRCIFGNIEDIYRFQKKLLKGLEKKFNKEQPHLSEIGSCFLE
HQTDFQIYSEYCNNHPNACVQLSRLMKTNKYVFFFEACRLLQKMIDISLDGFLLTPVQKI
CKYPLQLAELLKYTNPQHRDYKDVEAALNAMKNVARLINERKRRLENIDKIAQWQSSIED
WEGEDILSMSSDLIFSGELTKISQPQAKSQQRMFFLFDHQMVYCKKDLLRRDMLYYKGRM
DMDLMEVVDVEDGKEKDFNVSVKNALKLRSLAGDEIHLLCAKKPEQKQRWLRAFQDERTQ
VQHDLETGFSITEVQKKQAMLNACKSHPAGKPKAVTRPYYDFLLRQKHPSLPSTVPQQQV
FMLAEPKRKATTFWQNIGRLTPFKK
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccactgagaaagacagggacagtgttgtcctgtctggtgacatcatcctgtcc
aactccacctccggccttaagagcccgtcattgtgtctccccgaggactcatccagtatc
gagtcatcagagcaccaactggactcgttgacctttgaccccgatgacctcagggttatg
accttaccacacgacagggaccatgcaagcagcgagagacgctccagtccaacccccacc
tctgtgtcctacgactttgacaccaccagcactaacagtgaggagacggaagagtccatc
ctgcctgtctcaggggggaacaccaacctccacaaacccatgaagagcaagtctaaaggc
agccaggaagggaggtccaagagctccaagttctctgtctttgccaagatgccttctttc
aggaaggggaagagtctgaagaatgccaagggggaggacttgccccgggactcaccagac
ctgggcctgagcagggatatggggggaggacaggtgggacaagggggagacacctcggat
gatgacaatgttttcttgaagggggacatcctgaaccagacggttcagcagtccttctcc
tccagtctgggtggtcactacgagacagagcaggaggattacggcttcttcccctccaca
ccgcgcacccgccatgtccgcctgctcttcagggacgggcctggggacacccccctgacc
tcccagcctggaggtctcagacacaaccagaccggtgcccccgagggcctgcacggctat
aagaggagcaagagctcggacagcctcaatcttcgcatgcgcttcgcccaggcccacaag
tccctgtccagcctgtttgagtctcgctccatggacaaggagaacgaggaggagcaggtg
aacattgagactgggagcgaaggggaggtggggcgagccaaacagtcctggaggaggcta
aagagagagagggccaaggaggcagaactgctgaggaggaccctgtctgtcccggtcggg
gacggggacaagggaggggacggtgaggatgggggtgtgaggacgcccagacagatccat
agtgactatgcgtcccgctctgcctcagtgctcagtgtccctgggtccccctcctctccc
agggccctgtgtctcaccgatcccctcaccaagaggggcttccaggacagtcacagcggg
gccggggagaacaccccactgggctgcaagtcagagggccagaggaggaaagggaaagtc
ctgcccaacggcctgtcaataaacttctctgactccggaccggcgtcctcggacgactct
gaagccccacccacaaacgattccagccccctgtcgcccatgagccccgcctccctggcc
accctagccaatcagctgtcttggtccagctccaggtccccaggaggagcctttgagagc
acagcgtctagcatggcagcaacaccagacaccccagtgagacccatgagccccaagccc
cacagccccagaccggctgcccagcacaggccctaccgctacccccactctgcctcagcc
cgggcctcagccctgtccctggtcctcatggcccagtcagccagtgtagagggcttgtct
gacccaccagagaagcccaagactctgaagcccagagcggggccgctaggctcctcctcc
ctgagtccattggaggacagtggagtggacagccaatcacagatcagcctgctcacacct
atgtccatcaaccagtttgagactcagggtggctgtagacccaccagccaggcaggagga
gagaagaggctagcagagcttaagtctcctgggtctggactggtcactactgcctcagcc
ctcagaccatcatcaggccacaggcccaacagggagagggacaggggtccaagacgccac
cgctgctcctcagacgacctgtggatcgaagaggagaagagacggaagcggaagctggcc
cgagtcgtgaggggcagcctgggacaactcaacacccactgtcctgaagatctggagaaa
gcacgggctcgagtgtccctgtcgaccatggaggcattctccgggattcccctgaaggcc
cactgcttctcccagagcacccccatcggacttgactgtctgggttggagacgacgcatc
tcctacccctcggtgatagtaccagatggaggtggagagaaggccggtctgggtctgggt
gatgatctaggcagtgatgaagacctgtatgaagagttccgcagctccggacatcgctgt
ggacacccagggggaggtggagaacaactggccataaatgagctgatcagtgatggcagc
tgtgtgtatgccgaggccctgtgggaccatgtcaccatggacgaccaggagttgggcttc
aaggcgggggacgtcatcgaggtagtggatgccaccaacaaggagtggtggtggggacgc
atcctggacagtgagggctggttcccagctagctttgttcggttgcgtgtgaaccaggat
gagcccatggaggagtacctagcccagctggaggaggccggggctggggaagaggaccgt
ccaggggtgggtctgatcctgggaccaggcctgccgtgtaaggaccagatgaggactaac
gttatcaatgagatcatgagcacagagagagactacatcaaacacctcaaagacatctgt
gagggttacatcaagcagtgccgtaagaggatagacatgttcacagaggagcaactgcgg
tgtatattcggcaacatcgaagacatctaccgcttccagaagaagttactgaaaggtctg
gagaagaagttcaacaaggagcagccgcacctcagcgagatcggatcctgcttcctcgaa
caccaaacagacttccagatctactcggagtactgtaacaaccaccccaacgcctgtgtg
cagttgtccagactgatgaagaccaacaagtatgtgttcttcttcgaggcctgtcgtctg
ctccagaagatgattgacatctcgctggatgggttcctgctcacgcccgtccagaagatc
tgcaagtaccctctgcagctggccgagctactgaaatacaccaaccctcagcatagggac
tataaggacgtggaggccgccttgaacgccatgaagaacgtggccaggctgatcaacgag
aggaagcggcgcctggagaacatcgacaagatcgcccaatggcagagctccatagaggac
tgggagggagaagacatcctcagtatgagttcagatctgatcttctctggagagctgaca
aaaatctcccagcctcaggccaagagccagcagcgcatgttcttcctcttcgaccaccag
atggtctactgcaaaaaggacctcctgcgtagggacatgctgtactataagggtcgtatg
gacatggacctgatggaggtggtggatgtggaggatgggaaggagaaggacttcaacgtg
tcggtgaagaacgctctgaagctgcgctcgctggcgggggacgagatccacctgctgtgt
gccaagaagcctgagcagaaacaacgctggctccgagccttccaggacgagaggacgcag
gtgcagcacgacctcgaaacaggattctccatcactgaggtccagaagaaacaggccatg
ctgaacgcctgcaaaagccatccagctgggaagcccaaagcggtgacccggccctactat
gacttcctgctgcgtcagaagcacccgtctctgcccagcaccgtacctcagcagcaggtc
ttcatgctggctgagcccaaacgcaaggcaaccaccttctggcaaaacatcggcagactg
acgcctttcaagaagtga
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