Salmo trutta (river trout): 115152903
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Entry
115152903 CDS
T08542
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
stru
Salmo trutta (river trout)
Pathway
stru04136
Autophagy - other
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115152903
04136 Autophagy - other
115152903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115152903
03029 Mitochondrial biogenesis [BR:
stru03029
]
115152903
Membrane trafficking [BR:
stru04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
115152903
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115152903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
WDR55
BCAS3_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EML
CPSF_A
Beta-prop_NWD2_C
Beta-prop_RSE1_2nd
Beta-prop_HPS5
EIF3I
Motif
Other DBs
NCBI-GeneID:
115152903
NCBI-ProteinID:
XP_029553683
Ensembl:
ENSSTUG00000049710
LinkDB
All DBs
Position
18:17345328..17355249
Genome browser
AA seq
446 aa
AA seq
DB search
MEERGTSDGPGGPQGLISASFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAECPDVY
IVERLFSSSLVVVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDANNLSKVTM
IPAHDSPLAALTFNTSGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLEQHSPSRDGESPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNVCALSTVQKLPRLLVASSDGHLYIYNIDPQDGGECVLVRKHRLFE
GDEAPQEAQQEEEEPEDGRSLPPSTSPSYAATVSLTSTPPSSTTLTGYSEDGGAEKGDVI
PEHEFAEGPVCLDDENEFPPVSKQTN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgggggacatccgacggtccgggagggcctcaaggcttgatcagcgcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcagtggacaagatggactgcatccacgaaggagcggagtgtccagacgtgtac
atcgtggagcggttgttctccagcagtctggtggtggtagtcagtctctccatgccccga
cgtatgaacgtctaccacttcaaaaggggaacagagatctgcaactatagctactctaac
aacatcctctcagtccggctcaacagacagaggctggtggtgtgtctggaggagtcagtc
tacatccacaacatcaaagacatgaagctgctgaagacactgctcaacacgccccataac
ccctcaggtctctgtgccctctctgtgaaccatggtaactcctacctggcgtaccctggc
agtcagaccatcggagagatcatggtctatgacgccaacaacctgagcaaggtgacgatg
atcccagcccatgacagtcccctggctgccctcacattcaacacttcaggaaccaaactg
gccagtgcctccgagaggggtacagtgatcagagtgttcaccatcccagagggacagagg
ctgtttgagttccgtagagggatgaagaggtatgtgagtatcagctcgttgtcctttagt
tcagatgcacagttcctctgtgcctccagcaacacagagacggtccatatcttcaaactg
gaacagcacagccccagtcgagatggcgagtctcctacgtggggtgcctacgtggggaag
atgttcacagctgccagcacctaccttccctcccaggtctctgacatgatgcaccaagac
cgggcctttgccaccgtacgactcaacatgttcggactcaagaacgtatgcgccttgtcc
acggttcagaagctacctcgtctgctggtggcgtcatcagatggacatctctacatctat
aacattgacccacaggacggaggagagtgtgttctggtcaggaaacacaggctatttgaa
ggagatgaggcgccacaggaagcacaacaggaagaggaggagccagaggatggaaggtcc
ctcccaccgtcaaccagcccatcttacgctgccactgtgtctctcacctcgaccccaccc
tcttctaccactctcacaggctactcagaggatggaggggctgagaaaggggatgtgatc
cctgaacatgagtttgccgagggacccgtctgtctggatgacgagaacgagtttcctccc
gtcagcaaacagaccaactga
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