Salmo trutta (river trout): 115153002
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Entry
115153002 CDS
T08542
Name
(RefSeq) nucleolysin TIAR-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115153002
03041 Spliceosome [BR:
stru03041
]
115153002
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115153002
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115153002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_Nup35
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
115153002
NCBI-ProteinID:
XP_029553847
Ensembl:
ENSSTUG00000010010
UniProt:
A0A673XHT4
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Position
18:complement(21828925..21854133)
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AA seq
426 aa
AA seq
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MEDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDIAKS
VPQMEYGQGQWGQWSQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNLSRQSQSPAWVGGFGSPAPSQPQTGPVMPNQGNFNMAGYQTHLNYPPQFGSMLA
EDLASQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaagccaccccaaaaccctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgata
actgagcaacccgatagcaggaggatgaactcttctgtcggattttctgttttgcagcaa
tcaagcaatgacccgtattgctttgtggagttctttgaacatagagatgctgctgctgcc
ctagcagccatgaacgggaggaagatattgggaaaggaggtcaaagtaaattgggcaacc
actccaagtagccagaagaaagacacatctaatcacttccatgtatttgttggagacctg
agccctgagatcaccactgaggatatcaaagctgcatttgcaccttttgggaaaatctcg
gatgctcgtgttgtgaaggacatgactacagggaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccattgtgcacatggggggacagtggttaggg
ggacgccagataaggaccaactgggcaactcgcaagccacctgccccaaagaatgtgcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcactgtgtactgtggaggaatccagtccggactatcagagcatctcatgcgacagaca
ttttcgccctttggacaaatcatggaaataagagttttcccagagaaaggttactctttc
atcaggttctcctcccatgaaagtgctgcccatgcaattgtttctgtaaatggaacgtcc
atcgaatgccacatagtgaagtgctactggggaaaagaatcccccgacattgccaaaagc
gtaccacagatggagtatggtcagggtcagtggggacaatggagccaaatgtatgggagc
ccccaggcccagcagtatggacaacagtacatggcaaatggttggcaagtgccctcttat
ggagtgtcttatggacagtcttggaatcagcaaggatttggtgtagaggactccattctg
gctgcagcagcacagaacctttcaagacagtcccagtccccagcctgggttggagggttt
ggatccccggcaccgtcccagccccagaccggtcctgtgatgcccaaccagggaaacttc
aacatggctggctaccagacacatttaaactaccctccccaatttggttccatgctggct
gaagacctagctagccagtaa
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