Salmo trutta (river trout): 115153072
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Entry
115153072 CDS
T08542
Symbol
abca4a
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115153072 (abca4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115153072 (abca4a)
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115153072 (abca4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_22
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
115153072
NCBI-ProteinID:
XP_029553983
LinkDB
All DBs
Position
2:complement(21022783..21084097)
Genome browser
AA seq
2347 aa
AA seq
DB search
MGTGSQVRLLLWKNWTLRKRQKMRFFMEIMWPVVLFIGLVWLRTANPLYRQHECHFPNKA
MPSTGILPWIQGIFCNANNPCFQYATRGEGPGLVSNYNDSILARFYLDTQELLLSDPEFL
QLGRLWRELFTMSTFMDTLRTSPEQISGRGLKVEDILKDDETLTSFLLRDVPLPEFVVNE
LVNAKIRPEQFVFGVPDLHLKDIACSQTLLEQFIIFPSRRGLYRVHSSICALTPQRLQII
EDRLYANVDFFKLFRQLPRVLDNHSNGVDLLFWARVLSATSEKLRELSERNSSKALVEVM
SPLLQSQGGSPPSFSQLMGAASSLVCGYMEGAFSRVASFNWYEDNNYKAFMGINDSTRGG
QGQYTYDHTATLFCNDLMKELESNPITRIMWSSVKPMLMGKILYAPDSPAVRKIIRNANT
TFEELERLRTMGRAWEEVGPQVWAFFQDSVQVKMIRDTIRNPTVRDYIDRSLQDTEFSSK
HILNFLYNGPIEDRDYDMANFDWRNVFNFTDQVIRMMNQYGECLILDKFSGLNDEEQMTH
RALSLMGESKFWAGLVFMDTYPWTTKVPPHVRFKIRMDIDAVERTNKIKDRYWDPGPRAD
PVDDLRYVWGGFAYLQDMIEHGIIRTQTGKDWPLGVYLQQMPYPCYVDDLFMLTLNRCFP
IFMVLAWVYSVSMTVKSIVLEKELRLKETLKTMGVTNGVLWVTWFIDSFLMMAASTSLLT
GIIMGGKVLNYSNPLILFLFLLTFTTATIMQCFLLSVFFNKANLAAACSGIIYFTLYLPH
ILCFAWQDRITKDDKIMASLMSQVAFGFGTEYLSRYEEQGLGLQWDNIQTSPLEGDEYSF
LTSISMMALDTVLYAVLAWYLDNVFPGQYGIGRPFYFPILPSYWLNSRPPKPKELEKPRF
DNLVNQAEENQKINHEPGDEQKTKAPDEELPSCKHQDKRERLGKGKTEEEEEEEEEEENK
KNQEEKPNGEKEGQPSHAYFEGEPAGLVEGVCVQNLVKVFGRGQKPAVDGLSITFYESQI
TAFLGHNGAGKTTTMSILTGMFPPTSGTASIYGKDIRTDMDTIRHSLGMCPQHNILFHHM
TVEEHILFYSLLKGRSLSEAQLEVENMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVG
GAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTVILSTHHMDEADLLSDRVAIISQGRL
HCCGSPLFLKNCFGAGFYLTLVRRMKYEGPKTKMKCDCTDECSCKCSTCTTYKEELPQAK
TQDRQMDGDLSSITGLVHHHVPEARLIEAIGQELTYLLPNQGFQPRAYASLFRELEETLS
DIGLSSFGVSDTSLEEIFLKVTVDGEAKSGKTTQDQRLWQQTPRPSVGHNKVALYVDQSE
EADGETQANRQGNSGGSEGSEGRGSRQVKGVCLVLKQLFALLIKRFHHATRSHKDFFAQI
VLPASFVFVSLMFTTIVPPFGEYPSLTLSPWMYGRQFTFFSNERILDPEMRYFGEVLLNK
PGFGTRCMVDEPLEDFPCNNITTEWEMPLVNPALIDMLDGPEWTSVNPSPGCQCSTPRKL
TMLPVCPEGAGGRTPPQRIQSTGDVLVDLTGRNISDYLVKTYPSLIKASLKSKYWVNEQR
YGGISVGGQLPVLDVDPKTIQDAASQLGRLLNVTGGKYSKQTLKDIGTFLRYMESEYNVK
VWYNNKGWHAMVAFMNVANNAILRANLPKDARLDVYGITTINHPLNLTKEQLSEVTVLST
SVDVMVAICVIFAMSFVPASFVLYLIQERVTQAKHLQFVSGVSPVIYWMANFLWDMVNYS
ISAALVVAIFMVFDKKCYTSPTNLQPLAALLMLYGWSVTPMMYPMSYIFSIPSTAYVSLS
CINLFIGINSSAITFILDLFDSTSALYKCNQLLKKMLLIFPHYCLGRGLIDMAMNQAVTD
VYARFGEDFSLDPYSWDFVGKNLVFMAVEGFVYFIMNILIQYRFFLDHWITDCKMDPITE
EDVDVAQERERIYNGGSKNDILKIRDLTKTYMGKTKPAVDRICVGVSPGECFGLLGVNGA
GKTTTFKMLTGDTDVSSGEASVTGHSILTNILDVHQNMGYCPQFDAIDELLTGREHLHLY
ARLRGVPESEISRVADWAIQKLGLADYAGHTAGTYSGGNKRKLSTAIAMIGCPPLVLLDE
PTTGMDPHSRRFLWNSIMSVIQDGRAVVLTSHSMEECEALCTRLAIMVNGTFQCLGTIQH
LKYKFGDGYVVTMKIQASTPGCSPDLNPAEAFMESTFPGCVQREKHYNTLQYEIASSSLA
RIFQLVLANKDRLNIEDYTVSQTTLDQVFVNFAKQQSGEDNGMVLHPRAAGARRKEIKVT
PLSCLGK
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atgggtacgggcagtcaagtccgattgctgctgtggaagaactggacccttcgcaagaga
cagaagatgcggttcttcatggagattatgtggccagtggttctgttcattggactagtg
tggctgaggacagctaaccctttataccgtcaacatgagtgtcactttcccaacaaggcc
atgccctcgactggcatccttccatggatccagggaatcttctgcaacgccaacaaccca
tgcttccagtacgccaccaggggagagggccccggactcgtctccaactacaacgattcc
atactggctcggttctacttggacacccaggagcttcttctgagtgacccagagttcctg
cagctgggtcggctctggagggaactgttcaccatgagcaccttcatggacaccctgcgg
accagcccagaacagatctcaggtcgagggctgaaggtagaggacattctgaaggatgat
gagaccctgacgtcctttctcctaagggatgttcctctgccagagtttgtggtcaatgag
ctggtcaatgccaagatcaggcctgagcagtttgtgtttggtgtccctgacctccacctg
aaggacatcgcctgcagtcagaccctgctggagcagttcatcatcttccccagccgcagg
gggctgtacagggttcacagcagcatttgtgccctcacaccacagagactacagatcata
gaggacaggctctacgccaatgtggacttctttaaactcttccgtcagcttccccgggtg
ttggataaccactccaacggtgtcgacctactcttctgggccagagtactctctgccacc
tccgaaaagctgcgagagttgtcagagaggaacagctccaaagcgctggtggaggtgatg
tcccccctgctccagtcccaggggggctctcccccatctttcagccagctgatgggggct
gcgtccagcctggtgtgtggctacatggagggggccttctctcgggtggcctccttcaac
tggtatgaggacaacaactacaaggccttcatggggatcaacgatagcacccggggagga
cagggacagtacacctacgaccacaccgccactctgttctgtaatgatctgatgaaggag
ctagagtccaatcccatcaccaggatcatgtggagctctgtcaagcccatgctgatgggg
aagatcctctatgcacccgactccccagccgtcagaaagatcatcagaaacgccaacacc
acatttgaggagctggagaggctgaggaccatgggtcgggcctgggaggaggtgggccct
caggtctgggccttcttccaggacagtgttcaggtgaaaatgatcagggataccataagg
aatcccacggtgagggactacattgacaggagtctacaggacacagagttctcctctaaa
cacatcctcaacttcctgtacaacgggccaatagaagacagggactacgacatggccaac
tttgattggaggaatgtcttcaacttcacagaccaagtcatccgtatgatgaaccagtat
ggagagtgtctgatcctggataaattctctgggctgaacgatgaggagcagatgacccac
agagctctgagtctgatgggggagagtaagttctgggctggcctggtcttcatggacacc
tacccctggaccaccaaggttccaccccacgtccggttcaagatccgcatggacatcgac
gcagtggagcgcaccaataagatcaaggacagatactgggaccctggtcctagggccgac
ccggtggatgatctccgttacgtgtggggggggtttgcctatctgcaggacatgatagag
catggcatcatcaggacccagacaggcaaggactggcccctcggtgtctacctacaacag
atgccgtacccatgctacgtggacgacctcttcatgctgacattgaaccgttgcttcccc
atcttcatggtgctggcgtgggtctactcagtgtctatgaccgtgaagagcatcgtcttg
gagaaggagctcaggctcaaagagaccctgaagaccatgggggtcaccaatggggttctg
tgggtcacatggttcatagacagcttcctcatgatggctgccagcacttccctgctcact
gggatcattatgggtggtaaggtgttgaactacagcaaccctctaatcctgttcctgttt
cttctaaccttcaccactgccaccatcatgcagtgtttcctactcagtgtgttctttaac
aaggccaacctggctgcagcctgcagcggtatcatctacttcactctctacctgccccac
atcctctgctttgcatggcaggaccgcatcaccaaggatgacaagatcatggcgagcctg
atgtcccaggtagcgtttggctttgggacagagtacttgtcccgttatgaggagcagggt
ctgggtctgcagtgggacaacatccagaccagccctctggagggggatgagtactccttc
ctcacctccatctctatgatggccctggatactgtactctacgccgtccttgcctggtac
ctcgacaacgtcttcccagggcagtatggaattggtcggccattttatttccccatcctg
ccctcctattggctcaactccagacccccaaagccaaaagagttggagaaacccaggttt
gacaacctggttaaccaggctgaagagaaccagaagatcaatcatgaaccaggtgacgag
cagaagactaaggcaccagatgaggagctgccatcctgcaaacaccaggacaaacgagag
aggctggggaaggggaaaacagaggaggaggaggaggaggaggaggaggaggagaacaag
aagaaccaggaggaaaaaccaaatggagaaaaagagggtcagcccagccatgcctacttt
gagggggaaccggcagggctggtggagggtgtgtgtgttcagaacctggtcaaggtgttt
ggtaggggacaaaaacctgcggtagacggactgagcatcaccttctatgagagccagatc
actgctttcctggggcacaatggagctgggaagaccaccaccatgtctatcctgacgggg
atgttccctcctacctccgggacagcctccatctatgggaaggacatccggacagacatg
gacaccatcagacactctctgggcatgtgtccccaacacaacatcctctttcaccatatg
accgtagaagagcacatcctgttctacagcctgctgaaggggaggtctctgtctgaggct
cagctggaggtagagaacatgctggaggatctgggcctgccccacaagagagacgaagag
gcacagaacctctcaggcggcatgcagaggaagttgtctgttgctatggcatttgtgggc
ggtgccaaggtggtgattctggacgagcccacatcgggggtggacccctactccagacga
tctatctgggacctgctactcaagtaccgatcaggacgtacagtgattctgtccactcac
cacatggacgaggctgacctgttgagtgaccgtgtggccatcatctctcagggtcgtctg
cactgctgcggctccccgctcttcctcaagaactgcttcggtgccgggttctacctcacc
ctggttcgacgaatgaaatacgagggacccaagactaagatgaagtgtgactgtactgat
gagtgttcgtgtaaatgctccacctgtaccacgtacaaagaagagttacctcaagccaaa
acccaggacagacagatggacggtgacttgtcaagcatcacagggctggtccaccaccat
gtcccagaggcccgtttgatcgaggctatcggccaggagttgacctacctgctgcccaac
cagggcttccagcccagggcctacgcctccctcttcagagagctggaggaaaccctctct
gacatcggcctcagcagcttcggggtctccgacacatcactggaggagatattcctgaaa
gtgacagtggacggtgaagccaaatctggcaaaactacacaagaccagagattgtggcag
cagacacctcgacccagtgtaggacacaacaaagtagccctttatgtcgaccaatctgaa
gaggcagacggggagacccaggccaacaggcaggggaattctgggggctcggagggcagc
gaggggcggggctctagacaggtcaaaggtgtctgtctggtcctgaaacagttatttgcc
ctgctcatcaaacggtttcaccacgccacaagatcacataaggacttctttgctcagata
gttttgcctgccagttttgtgtttgtatcactgatgttcactacgatcgtacctccgttt
ggagagtaccccagcctgacccttagtccctggatgtatggacgacagttcaccttcttc
agtaacgagcgtatcttggaccctgagatgaggtactttggagaggtgctgctgaacaag
cctggctttgggactcgctgcatggtggatgaacctctggaggatttcccatgtaataac
atcacaacggagtgggagatgccgctagtgaaccctgctctgatagacatgttggatgga
ccagagtggacctcagtgaacccttccccaggctgccagtgtagtacccctaggaaactc
accatgctgcctgtctgccctgagggagcaggggggcgaacaccacctcagaggatccag
tcaacaggtgatgttctggtggacctaacaggcaggaatatctctgattacctggtgaag
acttacccctccctcatcaaggccagtttgaagagcaaatactgggtgaatgaacaaagg
tatggaggtatatctgtcgggggacagcttcctgtgttagatgtggaccctaagaccatc
caggacgcagcgtcacagctgggacgactgctcaatgttactgggggtaaatactccaaa
caaactcttaaggacataggaaccttccttcgatacatggagagtgaatacaatgtcaag
gtgtggtacaacaacaagggctggcatgccatggtggccttcatgaacgtggccaacaac
gccatcctcagagccaacttgcccaaagatgccaggctggacgtatacggcatcaccacc
atcaaccaccctctcaaccttaccaaggaacagttgtctgaagtcactgtcctgagcacc
tcagtggatgtgatggtggctatctgtgtgatcttcgccatgtcctttgtcccagcctcc
tttgtgctctacctcatccaggagagggtgacccaggccaaacacctccagttcgtcagc
ggggtcagtcccgtcatctactggatggccaacttcctctgggacatggtgaattactct
atcagtgcagcactggtggtggctattttcatggtctttgacaagaagtgctacacgtcg
ccaaccaacctccaacccctggcagccctgctcatgctctatgggtggtctgtgacgccc
atgatgtaccccatgtcctacatcttcagtattcccagcacagcctacgtctctctgtcc
tgcatcaacctgttcattggcatcaacagcagtgccatcaccttcatccttgacttgttt
gacagcacatcggcgctgtataagtgtaaccagctgctgaagaaaatgctgctgatcttc
ccccactattgtcttggccggggtctaatcgacatggctatgaaccaggctgttactgac
gtctatgcccgctttggtgaggacttcagtctggacccctacagttgggactttgtaggg
aagaacctggtcttcatggctgttgagggctttgtctatttcatcatgaacatcctgatc
cagtaccgcttcttcctggatcactggatcacagattgtaagatggatcccatcacggag
gaagatgtggatgtggcccaggagagagaacgcatctataatggaggaagcaagaatgac
atcttaaagattagagacctgaccaagacatacatggggaagactaagccggctgtggac
aggatctgtgtgggagtgtcacctggggagtgctttgggctcctgggtgtgaatggagca
gggaagaccaccacctttaaaatgctgaccggagacactgatgtcagctcaggagaagcc
tctgtcactggtcacagcatccttaccaatatcctggacgtgcaccagaacatgggctac
tgcccccagtttgatgccatagatgagctgctgactggcagagagcacctccatctgtat
gcccgcctcagaggggtgcctgagtccgagatcagcagggtggcagactgggcaattcag
aagctgggtctggctgactatgctggccacacagccgggacctacagcggcggcaacaag
agaaaactatccacggccattgccatgatcggctgtcctccgctggtcctgctggacgag
cccacgacaggcatggacccccactcacgtcgtttcctgtggaactccataatgagtgta
atccaagatggccgagcagtggtcctcacctcacacagtatggaggagtgtgaggctctg
tgtacccgtctggctattatggtcaatggcaccttccagtgtcttggtaccatccagcac
ctcaaatacaagtttggtgatggttacgtggtcaccatgaagatccaggcctccacacca
ggttgttccccagacctgaacccagccgaggccttcatggagagcaccttccctggctgt
gtccagagggagaaacactacaacactctgcagtatgaaatcgcctcttcctccctggct
aggatcttccagctggtcctggccaacaaggaccgcctcaatatagaggactacaccgtc
tcccagacgacactagatcaggtgtttgtgaactttgccaagcagcagtcaggagaggac
aacggcatggtgctacacccaagggccgctggggcacggagaaaagaaatcaaggtcaca
cccctaagttgtctggggaaatga
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integrated database retrieval system
