Salmo trutta (river trout): 115153113
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Entry
115153113 CDS
T08542
Name
(RefSeq) oocyte zinc finger protein XlCOF6-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115153113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115153113
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115153113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2H2_11
BolA
zf-C2H2_3rep
zf-C2H2_8
zf-LYAR
zf-met
zf-C2HE
zf-C2HC_2
Scramblase
Motif
Other DBs
NCBI-GeneID:
115153113
NCBI-ProteinID:
XP_029554037
LinkDB
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Position
18:complement(27767285..27770659)
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AA seq
769 aa
AA seq
DB search
MSRLKDQLATVMRLLVNAAVVEISKLLDECTSQNVYTESQRQSTGSGTELSATMKRLCRE
AMQKIISLIDEDTASLRLQVSVCQRDNQVLKENLQLMDGDLRTTRGLGEVGAEDRKTQGK
DLTKIVRLSEVNSGMSSETEEECAEWITLKEGTLQQDAQTGHTREDTDGESRTEAGEDAT
IEHNLEEEITTPLSPAKAQDDQDLEPAAPTGISNDAKMAAPTVRQMRLRVARRTKGQKSV
KGDKCLSCVQCGKAFSKLSNLKAHQVVHTGERPFKCTQCGKGFTAKCSLKVHHVIVHKRE
KRFKCTYCGKIFGTQSQLKEHQVVFKGEKEKVLRCTLCAKAFPAKCSLKAHRIAVHRGEK
RFKCSQCGKVFARQRDMIVHQGVHTGERPFKCTTCGKSFTARRSLNVHVLTVHKGERPFS
CDICGNRFSQRSGLKAHRRTHTGEKPYMCDQCGKGFSLKSALNTHHVVHTGEKAFSCEIC
GKCFSLAPNLRRHQQTHSGVKAFTCDICQKSFTQASHLKVHQRIHTGEKTFVCDVCGKSF
NQKSSLMIHQKIHSGDKPYDCLECGKCYRSANYLKRHQVTHTEKKTHSCEECGKNFHTAT
NLKTHRRVHTGKKTFTCDICEQGYSSLSYYNAHRLIHTEGKPFSCTMCEKHFAKQHFLNL
HLRTHTGERPHTCDLCGKSFSFAQNLVRHKRVHTGEKPFLCILCGKTFSQANNLKAHQQV
HTGEKPYNCSKCRKSFSCMRNLKEHKCIEVQEQIVEVTVGDSHKYCNNV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtttaaaggatcaactggccaccgtcatgaggcttttagtaaatgcagccgtg
gtggaaataagtaaattgttggacgagtgcacgagtcaaaacgtttacaccgagtcacag
aggcagagcactggctctgggactgagctgtctgccaccatgaagagattgtgcagagag
gccatgcaaaaaatcattagtctcatagatgaggatacagcttctctgcgtctgcaagtg
tctgtgtgtcagagagataatcaggttctgaaggagaatctccagttgatggatggggac
ctgaggacgactagagggcttggagaggtgggtgcagaggacaggaagacccaaggaaaa
gacctgactaaaattgtgcgcttgtctgaagtcaacagtggcatgtcttcagagacggag
gaggaatgtgctgaatggatcacgttgaaggagggtaccctgcaacaggacgcccagaca
ggacacacacgtgaggacacagatggagaatccaggacagaggctggggaggatgctact
attgaacacaacttggaggaggagattactacaccactctcaccagcaaaggcccaagat
gaccaagacttagagcctgctgcgcccacaggcatatccaatgatgctaagatggcggct
cccacagtacgtcaaatgagactgcgtgtggcgagacgcacaaagggccagaaatctgtc
aaaggagataaatgtttaagctgtgtacagtgtgggaaggcttttagtaaactaagtaac
ctgaaagcccaccaggttgtccacacgggtgagaggccatttaagtgtacgcagtgtggg
aagggctttacagcaaagtgcagtctcaaagtacaccacgttatagtccacaaaagggag
aagcgattcaagtgcacatactgcgggaagatatttggcacccagagccagcttaaagaa
caccaggtggttttcaaaggagagaaagagaaggtattaagatgtactttgtgtgctaag
gctttccctgcaaaatgtagcctcaaagctcacagaatagctgtacacagaggagagaag
agattcaagtgctctcagtgtgggaaggtttttgccaggcagagagatatgatagtacac
cagggtgtacacacaggagaaagaccatttaagtgtacaacgtgtgggaagtcttttaca
gctagacgaagtttaaatgtacacgtgctgactgtacacaaaggagagcgacctttcagc
tgtgacatatgtggcaatagattcagccagagaagtggcctcaaggctcaccgaaggacc
cacaccggagagaagccctacatgtgtgaccaatgcggaaaaggcttcagcctgaaaagt
gcccttaatacccaccacgtagttcacactggtgagaaagcatttagctgtgagatctgt
ggcaaatgttttagtttagcgcctaacctccgcagacaccagcagactcactctggtgtt
aaagcattcacctgtgacatatgccagaagagtttcactcaagctagtcatctcaaagtt
caccagcgcattcacacaggtgagaaaacatttgtatgtgacgtatgtggaaagagcttc
aaccaaaagagttcgctgatgatccaccagaagatccacagtggggacaaaccctatgac
tgcttagagtgtggaaaatgctaccggtctgcaaactatctgaaaaggcaccaggtgaca
cacacagagaaaaaaactcactcttgtgaagaatgcggaaagaatttccacaccgctacc
aatctcaaaactcatcgtcgggtccacacaggcaagaagacgtttacctgtgatatatgt
gaacaagggtacagttccctgagttactataacgctcaccggctcattcacactgagggg
aaaccattcagctgcaccatgtgtgagaagcacttcgccaaacagcatttcctcaatctt
cacctacgcactcacactggagagaggccacatacctgtgacctgtgtgggaagagcttc
agttttgcacagaaccttgttcgccacaaacgcgtgcacactggggagaaaccgtttctc
tgcattttgtgtgggaagactttcagccaagctaacaatctcaaggctcaccagcaagtg
cacactggggaaaaaccatacaactgctccaaatgcaggaagagcttctcctgtatgaga
aatttgaaggaacacaagtgtattgaagttcaagaacaaatagtggaagtgactgttgga
gactctcacaagtactgtaataatgtatga
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