Salmo trutta (river trout): 115153194
Help
Entry
115153194 CDS
T08542
Name
(RefSeq) elongation factor 1-alpha, somatic form-like
KO
K03231
elongation factor 1-alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115153194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115153194
03016 Transfer RNA biogenesis [BR:
stru03016
]
115153194
03012 Translation factors [BR:
stru03012
]
115153194
04131 Membrane trafficking [BR:
stru04131
]
115153194
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115153194
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115153194
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115153194
Translation factors [BR:
stru03012
]
Eukaryotic type
Elongation factors
115153194
Membrane trafficking [BR:
stru04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115153194
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115153194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
115153194
NCBI-ProteinID:
XP_029554244
Ensembl:
ENSSTUG00000045376
LinkDB
All DBs
Position
18:complement(31435059..31440056)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYSPDMVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagcttcacatcaacattgtggtgatcggccacgtggactctggaaag
tccaccaccactggccacctgatctacaagtgcggtggcattgacaagaggaccatcgag
aagtttgagaaggaggctgctgagatggggaagggatcctttaagtatgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcattaccattgacatatcactgtggaagttt
gagaccagcaggtactacgtcaccattatcgatgctcccggacacagggacttcatcaag
aacatgattactggaacctcccaggcagactgtgcagtgctgatcgtggcggccggcgtg
ggtgaattcgaggcgggcatctcaaagaacgggcagacccgcgagcatgccctcctagcc
tacaccctgggggtcaagcagctgatcgtgggaatcaataagatggactccactgagccc
aactacagccagaagcgctatgaggagattgtgaaggaagtcagcacctacatcaagaag
atcggctacagcccggatatggtagcctttgttcctatctctggttggaacggagacaac
atgctagaggccagtcctaacatgacctggtttaagggatggaagatcaccaggaaggat
ggcagttcgtccgggaccaccctgctggaagctctggatgccatccagcccccgtcccgc
cccaccgacaagcccctccgcctgcccctgcaggatgtctacaagattggaggaattggc
acagtgcccgtgggccgtgtggagacgggtatgatcaagccaggcatggtggtgaccttt
gcccctgttaacgtgacaaccgaagtgaagtctgtggagatgcaccacgaggctttgacc
gaagcaatgcccggagacaacgtgggcttcaacgtcaagaacgtgtccgtcaaagacatt
cgccgtggcaacgtggccggagacagcaagaacgaccccccaatggaggcagccgtcttc
actgctcaggtgatcatcctgaaccaccctggtcagatcagtgctggctatgccccggtg
ctggactgccacaccgcccacatcgcttgcaagtttgctgagctcaaggagaagattgac
cgtcgctcaggcaagaaactggaggacaaccccaaggccctgaagtctggggatgccgcc
attgtggatatggtcccggggaagcccatgtgtgtggagagcttctctgagtaccctcca
ctgggtcgttttgcagtgcgtgacatgcgccagacagtggcagtcggggtgatcaagggt
gtggagaagaaagctccctccactggcaaggtcaccaagtccgcccagaaggcccagaag
accaaatga
DBGET
integrated database retrieval system
