Salmo trutta (river trout): 115153241
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Entry
115153241 CDS
T08542
Symbol
dhx32
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115153241 (dhx32)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115153241 (dhx32)
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115153241 (dhx32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
DUF7024
Motif
Other DBs
NCBI-GeneID:
115153241
NCBI-ProteinID:
XP_029554332
Ensembl:
ENSSTUG00000043858
LinkDB
All DBs
Position
18:36178156..36185490
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AA seq
733 aa
AA seq
DB search
MAQGITGEKYWEDRVAFETEGAGKEVVEYGDVLELNRFDGLPYSSRYYTLLKERMDLPVW
KARCDFMDKLANRQFIIVSGTARTGRSSQIPQWCAEFCLSVQYQNGMVVCTQVHRQHTVD
LALRVADEMDVNIGHEVGYSIPLETCCSGDTVLRYCTDDMLLREMMSDPMLEHYGVIVID
QAHERTVSTDVLLGLLKDIALQRPELRVVLLTATHPGPTLLGHYRNVPLIQLEGVCSAEA
VYTGTSHKDYFCSALRLVLEIHHSQEEGDIVVFLATTQEIDLARDILLREEANIPPHLGE
LLPVSVHPGLGGTLPMPGEEEGRCRRVFLTSSPNEDLFWAVHMLNFVIDAGVQKRNVYNP
RIRANSVAIQPISRIQAESRKQLVGPTGKSFCLYPEDTPLPSETRPHILESDITSTVLFL
KRMDIGGLGRCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKT
LLASCEFDCVNEVVTIAAMLTAPSCFLVPSRELRLEASQCHLKFQHPEGDHFTLINIYKA
FKQNQHEPFVSVEKWCQDYFLSLCALQTADAIRSELTDTLRRIELPVSMPSFGSKGNTRN
IKRALLAGFFMQVARDVDSSGNYFMLTHKHVAQIHPFSAYGTKTPKLGLPEWVLFHQYSF
SEDNCIRTVSHISPEEFIQMAPQYFFFNLPPSESKDILQNILDNGAEHYKAKKIQKSPSL
ESIPEVTASCVIQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagggcataaccggggagaagtattgggaggatagagtagccttcgaaacagaa
ggagcaggtaaagaagttgtagaatatggtgatgttttggagcttaatcgatttgacgga
ctaccctactcctctcgatattacacattactgaaggaaaggatggatctgccagtttgg
aaagccaggtgtgatttcatggacaagctggccaacaggcagtttattattgtctctggc
actgcaagaactggcagaagctctcagattccccagtggtgtgcagagttctgcctgtct
gtccagtaccagaatggcatggtggtgtgcacccaggtccacaggcaacatacagtggat
ctggctctgcgtgtagctgatgagatggatgtcaacattggtcatgaagtgggctacagc
atccccctagagacatgctgctccggtgacactgttctcaggtactgcactgatgacatg
ctgctcagagagatgatgtcagaccccatgctggagcactacggtgtcatcgtcatcgac
caagcccacgagaggacggtcagtacagatgttctactgggccttctcaaagacatcgcc
ctgcagaggcccgagctccgtgtggtgctcctcacagctacacacccaggacccacacta
ctgggccactacaggaatgtcccactgatccagctggagggggtgtgttcagcggaggcg
gtgtatactggtaccagccacaaggactacttctgctctgccctgcgactggttctggag
atacaccactcccaagaggaaggggatatagtcgtgtttttggccacaactcaagagata
gatcttgcccgtgatatcctccttcgtgaggaggccaatatacccccacatctaggggaa
cttctccctgtctcggtgcaccctgggctgggtggaactctgcccatgccgggtgaagag
gaaggccggtgcagaagagtattcctcacctccagtccaaatgaagacctcttttgggct
gtgcacatgctgaactttgtcatcgatgccggtgtccagaaaagaaatgtttataaccct
aggatcagagcgaactcagtcgccattcaacctatcagtcggatccaagcagaaagccgc
aaacagcttgtaggaccaacagggaagagtttttgtctgtacccagaggacacacccctg
cccagtgagacacgcccccacatccttgagtctgacatcacatccacggtgctcttcctg
aagaggatggacattggcggtctgggccgctgtgactttatcgacaggccagatcctgag
ggtctgatgcaggccttggaggaactggactatctagcagccctggatgacgatgggaac
ctgtcagagatcggcatcatcatgtctgagttccccctggagccccagatggccaagaca
ctactggcctcctgcgagtttgactgtgtcaacgaggtggtcaccatcgccgccatgctg
acagcaccaagctgcttcctggtcccctcaagggagttgaggctagaggcctctcagtgt
cacctgaagttccagcacccagagggagaccacttcaccctcatcaacatctacaaggct
ttcaaacagaaccagcatgagccctttgtcagtgtggagaagtggtgtcaggactacttc
ctgagtctgtgtgccctgcagacggctgatgctatccgctctgagctgactgacaccctg
aggaggatagagctgcctgtctccatgccttcctttggctccaagggaaacactcgcaac
attaagagagcgctgctagctggcttcttcatgcaggtggcaagggatgtggattcatca
gggaattacttcatgttgacacacaagcacgtggcccagatccaccctttctctgcctac
ggcaccaagacacccaaactgggcctgccggagtgggtcctcttccatcagtactccttc
tcagaggacaactgcatccgcaccgtgtcccacatatcaccagaggagttcattcagatg
gctccacagtacttcttcttcaacctgcctcccagcgagagcaaggacatcctccagaac
atcttagacaatggagctgaacactacaaagcgaagaagattcaaaagagccccagccta
gagagcataccagaggtcactgccagttgtgtcatacagtga
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