Salmo trutta (river trout): 115153313
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Entry
115153313 CDS
T08542
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04517
IgSF CAM signaling
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115153313
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115153313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115153313
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115153313
Intermediate filaments
Intermediate filament-binding proteins
115153313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
CH_2
PH_11
Motif
Other DBs
NCBI-GeneID:
115153313
NCBI-ProteinID:
XP_029554493
Ensembl:
ENSSTUG00000002895
LinkDB
All DBs
Position
18:complement(41816288..41931975)
Genome browser
AA seq
2360 aa
AA seq
DB search
MELQRATSMPGPLSPGPIFPGSHSPGPLSPSSGPGPSLASSPGPDPGYSAKQAAFNYNQL
EGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
IRVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNAILHKHRPDLID
FDKLKKSNAHHNLQNAFNLAEQHLGLHKLLDVEDISVDHPDEKSIITYVVTYYHYFSKMK
ALKVEGKRIGKVLDNAIETDNMIQKYESLASDLLEWIEQTIIILNNRRFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYIPRDGKLISDINKAWERLEK
SEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAAT
KKHEAIETDIGAYEERVQAVLSVAKELEAENYHDIKRVTARKDNVLRLWEYLLELLKARR
IRLEMNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHTLVEADIAIQA
DRVKAVNNNAQKFAIDAEGYKPCDPQVIRDRVAHMDFCYAELSQLAAERCARLEESRRLW
KFFWEMAEEEGWIREKEQILSSEDCGKDLTGTVRLLSQHRAFEDEMIGRAGHLQQTIKQG
EELVAADHFGADKIRERIQDIQEQWAALERLSAVRKARLEEACNLHQFQADADDIDTWML
DVLRIVSSADVGHDEFSTQALVKKHKDVAEEIAGYRPVIDALHEQSKTLPGEQTGSEEVQ
GRLSGIEERYKEVAELTRLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKL
EDLEVVQHRFESLEPEMNNQASRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFR
DLVDLKKDSLNSALGVQNYHLECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGM
ERDLTAIEDKLGELGKEGERLAAEHPDQAQGIMGRLGEITGVWDEMKGTLKNREESLGEA
SKLQQFLRELDDFQSWLSKTQTAIASEDMPNTLTEAEKLLAQHEGIKNEICNYEVDYQKM
RDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAHQLFLRDTKQA
EAFLNNQEYVLAHTEMPTTLEGAEGAIKKQEDFMTTMDANEEKINAVVDTGRRLVSDKNI
NADRIQEKVDSIDERHKKNRLAASELLCKLKDNRDLQKFLQDCQELSLWINEKMLTAQDM
SYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGMQLIAEKPETEAMVKEKLAALHKM
WDDLESTTQTKAKCLFDANKAELFTQSCADLDKWLVGVDGQIQSDDYGKDLTSVNILLKK
QQMLESQVEVRQKEVEELQSQAQVLSQEGKDTDEVDGQRRIVEKKFQQLLDPLKKRKGNL
MASREIHQFNRDVEDEILWVEERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRC
DDIFERSQQVLKDDDNSPSGEGIRQRLADLRRLWAQILEETGKRHGRLEEAHKAQQYYFD
AAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLTA
AGHPESERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVV
AGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNQLADELINSGHADAATIAEWK
DGLNEAWADLLELIDTRTQILAASFELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVE
TLQRMHTTFEHDIQALGTQVRMLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRTLLEAC
DGRRVRLLDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEI
DARNDSFTNCIELGKSLLARKHYALEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLVLEVH
QFGRDAGVAESWLLGQEPYLSSREMGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLT
TMELLEVRRQQEEEERRRNPPPAETQTDTASPQQKEGEQVSQNGLPSDQDSPRDNGEGSD
IVNGVAEPSPGGSPSAARKGKPSQAATLPAKSLDSTPANQMEGILHRKHEWEGHNKKASS
RSWHNVYCVINNWEMGFYKDIKSASQGIPYHNEIPISLKDAACEIALDYKKKKHVFKLKA
TDGNEYLFQAKDDEEMNSWMQAISSAACSDKTEMTPSSHSTPASSRAQTLPASVALATES
SPGKREKDKEKRFSLFSKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atggagctacagagggcgaccagcatgcctggccccttgtccccagggcctatctttcca
gggtcccactccccagggcccctgtccccttcctctgggcctggcccctctcttgcctcc
agccccggccctgatccgggctactctgctaaacaggctgccttcaactacaaccaactc
gagggccgttttaagcagctgcaagatgagcgtgaagcggtgcagaagaagaccttcacc
aagtgggtcaactcccacctagccagagtgtcctgcaggatcactgacctctatatggac
ctgagagatggacgcatgctcatcaaactactggaggttctctctggggagaaactgccc
aagcccactaagggacgcatgcgtatccactgcctggagaacgtggacaaggccctgcag
ttcctcaaggagcagagggtccacctagaaaacatgggctcccatgacatcgtcgacggc
aaccaccgcctcacccttggcctcatctggaccatcatcctccgcttccagatccaggac
atcagagtggagacggaggataacaaggagaagaagtcggctaaagatgctctgctgctc
tggtgccagatgaagactgcaggatatcccaacgtaaacattcacaacttcagcaccagc
tggagggatggcatggctttcaacgccatcctccacaaacacagacctgacctgatagac
tttgacaagctgaaaaagtcaaatgcccaccacaacctgcagaatgccttcaacctggca
gagcaacacctgggcctccacaagctactggacgtggaggatatcagcgtggaccaccct
gatgagaagtccatcatcacctatgttgtgacctactaccactacttctccaagatgaag
gccctgaaggtggagggcaaacggattgggaaggtgctggacaatgccattgagactgat
aacatgattcagaaatatgagagtttggcctctgacctcctggaatggattgaacagacc
atcatcatcctcaacaaccgcaggtttgccaactccctagtgggggtgcagcaacagctt
caggccttcaacacctaccgtaccgtggaaaagccgcccaagttcactgagaaaggcaac
ctggaagttctcctcttcaccatccagagcaagatgagggccaacaatcagaaggtctac
atcccgcgggacggcaaactcatctcagacatcaacaaggcctgggagaggctggagaag
tcagagcatgagagggagctggcgctaaggacggagctgattcgtcaggagaaactggag
cagctggcccgccgctttgaccgcaaagccgccatgagagaaacctggctgagtgagaac
caacggctcgtctcacaggacaactttggcttcgacctgcaggcggtggaggccgccacc
aagaagcacgaggccatcgagacggacatcggcgcctacgaggagcgtgtgcaggcagtg
ctctccgtggccaaggagctggaggcagagaactaccatgacatcaagcgcgtgacagcg
aggaaggacaacgtgctgcgtctgtgggagtacctgctggagctgctgaaggcccggcgc
atccggctggagatgaacctgggcctgcagagggtcttccaggagatgctttacatcatg
gactggatggatgagatgaagatgctgctgctgtctcaggactatgggaaacacctgctg
ggagtggaggacctgctgcagaagcacactctggtggaggctgatattgccatccaggcc
gaccgcgtcaaagccgtcaacaacaacgctcagaagttcgccattgatgcagagggctat
aagccctgtgacccccaggtgatccgggaccgagtggcccacatggacttctgttacgca
gagctgagccagctggccgccgagcgctgcgcccgcctggaggagtcccgccgcctctgg
aagttcttctgggagatggccgaggaggagggctggatccgggagaaagagcagatcctg
tcctcggaggactgcggtaaggatctgacgggcaccgtgcgtctgctgagccagcaccgc
gccttcgaggatgagatgatcggccgcgccggccacctgcaacagaccatcaaacaggga
gaggagctggtggccgccgaccacttcggagccgacaagatccgtgagcgcatccaagac
atccaggagcagtgggcggccttggagaggctatctgccgttaggaaggcccggctggag
gaggcctgcaacctgcaccagttccaggccgacgccgacgacatcgacacctggatgctg
gatgttctccgcattgtgtccagtgccgacgtgggccacgacgagttctccacccaggcc
ctggtcaagaagcacaaggatgtggccgaggagatcgccggctaccgacctgtcatcgac
gccctgcacgagcagtccaaaaccctgcccggggaacagactggctcagaggaggtgcag
gggcgcctgtcaggcatcgaggagcgctataaggaggtggctgagctgacccggctgagg
aagcaggccctacaggatgccctggccctctacaagatgttcagcgaggcggacgcctgt
gaggtgtggatcgatgagaaggagcagtggctcaacagtatggagataccagagaaactg
gaggatctggaggtggttcagcacaggtttgagagtctggagccagagatgaacaaccaa
gcttcccgcgttgccgtagtgaaccagattgctaggcaactcatccacagtggtcacccc
agtgaaaaggagatcaaagcccaacaggacaaactcaacaccagatggagccagttccgt
gacctagttgacctgaagaaagactccctcaactcagctctgggtgtacagaactaccac
ctggagtgtaacgagaccaagtcgtggatccgcgagaagaccaaggtgatcgagtccacc
caggagctgggcaacgacctggccggcgtcatggccctgcagcgcaaactcaccggcatg
gagcgcgacctgaccgctatcgaggacaagctaggagaactggggaaggagggggagcgc
cttgcagccgagcaccccgaccaagcccagggcatcatgggtcgtctgggggagatcaca
ggagtgtgggacgagatgaagggcaccctgaagaaccgcgaggagtccctgggcgaagcc
agcaagctgcagcagttcctccgggagctggatgacttccagtcatggctgtccaagacc
cagacggccatcgcttcagaagacatgcccaacacactgacggaggccgaaaagctgctg
gcgcagcacgagggcatcaagaacgagatctgcaactatgaagtggactaccagaagatg
agggacatgggggaaatggtgacccagggccagacggacgcccagtacatgttcctgagg
cagaggctgcaggccctggacacaggctggaacgagctgcataagatgtgggagaaccgt
cagaacctgctgtcccagtcccatgcccaccagctgttcctcagggataccaagcaggct
gaagccttcctcaacaaccaggagtacgtgctggcccacactgagatgcccacgactctg
gagggggcagagggcgccattaagaagcaggaggacttcatgaccaccatggacgccaac
gaggagaagatcaatgccgtggtggacaccggacgcagactggtcagtgacaaaaacatc
aacgctgaccgcatccaggagaaagtggactctatcgatgagagacataagaagaaccgc
ttggcggccagtgagcttctctgtaagctgaaggataacagagacctacagaagttcctt
caggactgccaagagctgtccctgtggatcaatgagaagatgctcacggctcaggacatg
tcgtacgatgaagccaggaacctccacagcaaatggctcaaacaccaggccttcatggcc
gagctgcagtccaacaaggagtggctggacaagatcgagaaggacgggatgcagctgata
gctgagaagccggagaccgaggccatggtgaaggaaaagctggcagcactccataagatg
tgggatgaccttgagtccaccacccagactaaggccaagtgtctgtttgacgccaacaag
gccgagctgttcacccagagctgtgccgacctggacaagtggctggtgggagtggatgga
cagatccaatcagacgactacggcaaagatctgaccagcgtcaacatcctgctcaagaaa
caacagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctgcagagc
caggcccaggtcctcagccaggaggggaaggacacggacgaggtggacggccagcgccgc
atcgtggagaagaagttccagcagctgctggaccctctgaagaagaggaagggaaacctc
atggcctcccgcgagatccaccagttcaacagagacgtggaggacgagatcctctgggtt
gaagagagaatgccactggcaacatctacagaccacggaaacaacctgcaaacagtccag
ttactcatcaagaaaaaccagaccctgcaaaaggagatccagggccaccagccgcgctgt
gacgacatctttgagcggagtcagcaggtgctgaaggatgacgacaacagccccagtggc
gaggggatccgccagcggctggccgacctgcggcgcctgtgggcccagatcctggaggag
acgggcaaacgccatggacgcctggaggaggcccacaaggcccagcagtactactttgat
gctgccgaggctgaggcctggatgagcgagcaggagctctacatgatgtcagaggagaaa
gccaaggatgagcagagctccgtggccatgctgaagaagcaccagatcctggagcaggct
gtggaggactacgctgagactgtccaccagctctccaagaccagcaggggcctgacggct
gccggacacccagaaagtgaacggatcggcatgcgtcagtcccaggtggataagctgtac
gcggggctcaaggacctgtcggaggagaggagggggaagctggacgagaggttccgtctt
tttcagcttaatagggaggtggatgacctggagcagtggatcgctgaaagggaggtggtg
gctgggtcacatgagctgggacaggactatgaacatgtcacgatgctgcaggagcgtttc
cgtgagtttgctcgcgacacgggcaacatcggtcaagagcgtgtggacactgtcaaccag
ctggcggacgagctcatcaactcgggccacgccgacgcggctaccatcgcggagtggaag
gacgggctgaatgaggcgtgggccgacctgctggagctgatcgacacacgcacgcagatc
ctggcggcgtccttcgagctgcacaagttctaccacgacgccaaggagatcctcaaccgc
atcctggacaaacacaagaagctgcctgaggagctgggccgagaccagaacacagtggag
accctgcagaggatgcacaccacctttgaacatgacatccaagccctggggacacaggtg
aggatgttgcaggaggatgctgtgcgcctgcagtctgcctatgccggagataaggctgat
gacatccaaaagagagagggtgaggttttggaggcctggagaacactgctggaggcctgt
gacggccgcagggtcagactgctcgacaccggcgacaagttccgtttcttcagcatggtc
cgagacctcatgctctggatggaggacgtcatccgcctaatcgaggctcaggagaagcct
agggatgtgtcgtctgtggagctcctgatgaacaaccaccagggcatcaaggctgagatc
gacgcccgtaacgacagcttcaccaactgcatcgagctgggcaagtccctgttggcacgg
aaacactacgcattagaggagatcaaagagaagttactacagttgacggacaagaggaaa
gacatgattgacaagtgggaggacagatgggagtggcttagattggttctggaggtgcac
caatttggaagggacgcgggtgtggccgagtcgtggctgctgggacaggagccgtacctg
tccagcagggagatgggtcagaacgtggatgaagtggagaaactcatcaagagacacgag
gcctttgagaagtcagctgccacctgggaagagcggttctctgcgctggaacggctgact
acgatggaattactggaagtgagaagacagcaagaggaggaggagaggaggagaaatccc
ccacctgcagagactcagactgacactgcatcgccacagcagaaggagggtgagcaggtg
tctcagaacggactgccatcggaccaggactcccctcgggacaatggggagggaagtgac
attgtaaatggggtggcggagcccagcccaggcgggtcgcccagtgcagcacgcaagggc
aaacccagccaggctgccacgctcccggcaaagtccctggactcaaccccagccaaccag
atggaaggcatcctgcaccgcaaacatgagtgggagggtcacaacaagaaggcatccagc
agatcctggcacaatgtgtattgtgtgatcaacaactgggaaatgggcttctacaaagac
attaagagtgccagccagggcatcccctatcacaacgagatccccatcagcctgaaggat
gctgcatgtgagatcgccctcgattacaagaagaagaagcatgtgttcaaactgaaagct
acagatgggaatgagtatctcttccaagccaaagatgacgaggagatgaactcgtggatg
caggccatctccagtgctgcgtgctctgataagaccgagatgacccccagcagtcatagc
acccccgcctccagccgagcccagaccttgcccgcctctgttgccctggcaaccgaatcc
agcccaggcaagcgcgagaaagacaaagaaaaacgcttcagccttttcagcaaaaagaag
tag
DBGET
integrated database retrieval system
