Salmo trutta (river trout): 115153363
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Entry
115153363 CDS
T08542
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
115153363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115153363
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
115153363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
115153363
NCBI-ProteinID:
XP_029554582
Ensembl:
ENSSTUG00000011003
LinkDB
All DBs
Position
18:complement(45112866..45396645)
Genome browser
AA seq
1406 aa
AA seq
DB search
MLAEPDATVLHGSGNSMMSRNIYHNKNQDSSISISKMDVIIPFSPDVPCDNNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNTKKKEAQKVNNPANSQAADGTPKGPDEK
DEVVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMFFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYSPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVKLK
LLLIAIENKSELGESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRLIYSKYKYNGYVRSPAEGATTPGITGSQKETGVRFKADCNLVKDEV
RSSLQNRSIKIANCTSPPSTITSNAMRPQALPRPSLHQDPPVPQGEVTAVPLVNNRKGSL
LPPGVGLGLGPRGGFRLSISGPGRGDTAGRALAEQSRLNRARSLPVKYCYHPSNASLHGH
SSRAFEDEHPSTLSPKKKQRNGGMRNSPNNSPKMMSRHDPLLIPGNEQMENMDMNVKQYD
STGMFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFH
YHELKPIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQ
NNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPDSSPVHGLVRQ
ASVTTGANIPIITELAKPGKILPLVSFSQEKNCGINIQMITELVNDSNVQFLDQDDDDDP
DTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENAL
RGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRD
AHLATPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSHSSSKK
SSSVHSIPTTNRQNRSSKAREAGHKQNATRMNRMSQERKWFTDEPENAYPRNIQIKPMST
HMANQINQYKSTSSLIPPIREVEDEC
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgagccggatgccaccgttctccatggaagcggcaactctatgatgagtaga
aatatctatcataataaaaatcaggactcctcgatctctatatccaagatggacgtgatc
atccccttctcgccagacgtgccctgcgacaataatggccagcgcatgtggtgggcattc
ctcgcctcctctatggtcacgtttttcgggggtctcttcatcattctcctttggaggacc
cttaaatacctgtggaccgtgtgctgccactgcaacaccaaaaagaaggaggcccagaag
gtgaataaccctgctaacagtcaggcagcagatgggacacctaagggtcctgatgagaag
gacgaagtggtacctgccagcgaggtggggtggatgacctctgtgaaggactgggccggg
gtcatgatatcagcacagacactcaccggcagagtcctggtcgtgctcgtctttgctctc
agcattggagcacttggaatatactttatagactcttctgatcccatagaatcctgtcag
aatttctacaaagatttcacgttacagatcgacatgttcttcaatgtcttcttcctcctc
tactttgggctgcggttcatagcagccaatgataagctgtggttctggctggaggtcaac
tcagtggtggacttcttcactgttcctcctgtcttcgtatcggtctacttgaataggagc
tggctgggcttaagattcctgagagccttgagattgatacagttctcagaaattttacag
tttttgaatatcttaaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctaacagctgccggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccaaaattcccagtcactttcctattgggaatgtgtctacttgctcatg
gtcactatgtcaacagtgggctacggggatgtctatgcaaaaaccaccctgggacgcctg
ttcatggtcttcttcatccttgggggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatataacgctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccactttacccaggtagagttctaccag
ggatctgttctcaaccctcacgatctggcccgagtgaagattgagtcagcagacgcctgt
ctgattctggctaataaatactgtccagatcccgatgctgaagatgcctccaacatcatg
agggtcatctctatcaagaactattcccccaagatacgaattatcactcagatgttacaa
taccataacaaggctcacctgctcaacattcctagctggaactggaaggagggtgatgat
gctatctgtctagcagagctgaaggctggcttcatagctcagagctgtctagcccagggc
ctctccaccatgctggccaacctcttctccatgaggtctttcatcgagattgaagaggat
acatggcagaagtactatttagaaggggtagctaatgagatgtacacagagtatctgtcc
agtgcctttgtggggctctccttcccagcagtctgtgagctgtgctacgtgaagctgaag
ctgttgcttatcgccatcgagaacaagtcggagctgggagagagcagaagccgaaagcgc
atcctcatcaacccggggaaccacgtaaagatgcaggaaggaactctggggtttttcatc
gccagcgacgccaaagaagtaaagagagcatttttctactgcaaagcttgtcacgatgac
atcacagaccctaaacggatcaaaaagtgcggttgcaaacgactgatttattccaaatat
aagtataatggatatgtcagatcaccagcagagggcgcgacaacaccagggataacggga
agtcaaaaagagaccggcgttcggttcaaagcagattgcaatttagtgaaggatgaagtt
agatcatctttacaaaaccgatcgataaaaattgccaactgcacctcgccgccctccacc
atcacctctaatgccatgcgcccccaagcactgcctcgcccctccctccaccaggacccc
ccggtcccccagggagaggtcaccgccgtacccctcgttaataaccgcaaaggaagcctg
cttcctccaggggtggggctgggtcttgggccccgtggggggttccgcctcagtatctca
ggccccggcaggggggacacggcgggcagggccctggccgaacagagcaggctgaaccgg
gcccgcagcctgccggtgaaatactgttaccaccccagtaacgcatctctgcacggccac
agcagcagggcctttgaagatgagcacccgtcaactctgtcgcccaaaaaaaagcagcgg
aacggaggcatgcgaaactcacccaacaactcacccaaaatgatgagcaggcatgaccct
ctactaatccctgggaacgagcagatggagaacatggacatgaatgtgaagcagtatgac
tccacgggaatgttccactggtgcccatctaaagagattgagaaggtcatcctgacccgg
agtgaggcatccatgacggtgttgagcggccatgtagtggtctgtatatttggagatgtc
acgtccgctctagtggggctgcgaaacttggtgatgcctttgagagccagcaacttccat
tatcacgagctgaagcccatagtgtttgtgggctcgctggagtacctgaggagagagtgg
gaaactctacataacttccccaaggtctccatactacctggtacgccattaagtcgtgca
gatttaagggctgtcaacatcaacctctgcgacatgtgcgtgatactgtcggccaatcag
aacaatatcgacgacgcctcgctgcaggataaggaatgcattctggcgtcgctcaacatc
aagtctatgcagtttgacgacagcatcgggctcttgcaggctaactcccaaggtttcacg
cctcctggaatggaccggtcatctccagacagcagtccagtacatggtttagtacgccag
gcctccgtcaccaccggcgccaacatccccatcatcactgaactagctaaacctggcaaa
atactgcctttggtttcattcagtcaggaaaaaaactgtggaatcaacatacaaatgata
actgagctggtgaacgactccaatgttcagttcctggaccaagatgatgacgatgacccg
gacacagagctgtacctgacacagcccttcgcctgcggaaccgccttcgccgtcagcgtg
ctggactctctcatgagtgcaacatacttcaacgataatatcctcaccctgatccggacg
ctggtgactgggggagccaccccggagctagaggctctattggccgaagagaacgccctg
cgagggggctacagcacgccacagacactggccaaccgagacaggtgtcgtgtagcccag
ctagccctctatgacgggccctttgccgacttgggggacggcggttgctatggagatttg
ttctgtaaagcgttgaagacgtacaacatgttgtgcttcggaatctacagattgagagac
gctcacctcgccacgcctagccagtgtaccaaacggtatgtgatcaccaaccctccgtat
gagtttgagctggtccccacagacctgatcttctgcctgatgcagtttgaccataatgca
ggccagtcccgggccagcctctcccacagctctcactcctcccattcctccagcaaaaag
agctcatctgtccactccatccccaccaccaaccggcagaaccgcagcagcaaggcccgg
gaggccggccacaaacagaatgcaacaaggatgaatagaatgagccaagaaaggaaatgg
tttacagatgaaccagaaaatgcctacccacggaacattcagatcaagcccatgagcact
cacatggccaaccaaatcaaccaatacaaatccactagcagtctgattccaccaatcaga
gaagttgaagatgaatgctga
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integrated database retrieval system
